BAC Information

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BAC

Clone NameB6Ng01-028I20
Chromosome4 (Build37)
Map Location 72,600,901 - 72,602,042
singlet/doubletsinglet
Overlap genenone
Upstream geneTle1, Aldoa-ps2, EG384113
Downstream geneLOC667713, LOC100039698, OTTMUSG00000001246, LOC100039726, LOC667722, LOC623115, OTTMUSG00000000281, OTTMUSG00000000280, OTTMUSG00000000282, OTTMUSG00000000283, Gm428, Rasef, LOC667768, LOC545637, LOC623272, OTTMUSG00000014862, OTTMUSG00000004010, 2310002L09Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-028I20.bB6Ng01-028I20.g
ACCDH858999DH859000
length1,2341,122
definitionDH858999|Mus musculus domesticus DNA, BAC clone: B6Ng01-028I20, 5' end.DH859000|Mus musculus domesticus DNA, BAC clone: B6Ng01-028I20, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcctacactgggacattgagccctcacaggaccaagggcctctc
ctctcattgatgtcccacaaggccatcctctgcaacatatgcagctggag
ccatgggtccctccatgtgtactctttggttggtgctttagtcccaggga
actctgagggtaccggttggttcatattgttgtttctacaatgggactgc
aaacccttcagctccttgggtcctttttctagctccttcattggggaccc
tgtgctcagttcaatggttggctgagagcatccacctctgtatttgtcag
atattagcagagtctctcaggagacacctatatccggctcccatcagcaa
gcaattagttgcatccacaatactgtctaggtttggaaactgtatatgga
atggatctccaagtagggcagtctctgcatggcctttccttcagtctttg
ctccatgcttggtctttgtatcccctctcttgggtattttgatgctgctt
ttaaggaccgaagtatccaaactttggtctttctccttcttaagcttcat
gtgatctgtgaattgtatactgggtaatacatatttctgggctaatatct
atttatcagtgagtgcattggtttacctcagtcagaatgatatttttttt
agttcaatcaatttgcctaagaatttcatgaattcattggttttaatagg
tgagtaatatccattgtgtaaatgtaccatattttttgtatccattcctc
tgttgagggatatctgggttctttccagcttctggctatgataaataaag
ctgtcacgaacatagtgaagcatgtgtctttattgcatgttggagcatct
attgggtatatgccatggagaggtagagctgggtcctcaggtagtattat
gtccaattttctgaggaaccacaaactgatttccagaatggttgtaccag
cttgcaattccaccagtaatgaagagtgttccctttctcctcatccttgc
cagcatctgctgttacctgaattttgatcttgatctttctgacagatgag
tagaatcttaagttgtttgatttgcattttctcaagaataaagaagttgg
acattctttaggggtttcccagcattacgaatctcagtggattgtgttta
gctgacctatttaagaatgtttctggatcactttaactgtatatgaaatg
catgatagggatcactgtggattctgcagacgta
gaattcatggacacaaggagtgatgatcaacattttatttcctgaaaagt
ttaggtctgtaattcttttcatatttaactctttttagggcagaacttca
gagtaatcttgaagctagtttaaacaaaatatacttcagtctagactctg
cccagtttctttcatcctatttctttgtagtgcactccccatgaaaaggg
gcagtagaagaggtaattttctcaatagtagaaagtttaggatcatcaca
agaaatgcccatcatatgagaagccatacattcacgattaatatagaact
tctggtcattaataaggacaagttgaaaagtaagttgaagtttaaaagat
gctgactatccaataatcaaaatatatattctactaggaatacaacactc
agcaaattatatacaacaacagcagatgttgtccacagaagcaaattctt
gtaaattatctaaccatgttgagtcagatgtcagcataattacaaagata
ttatttcataaaaatcggaagccctggcttcctgactatagttaatttct
ctatttataaaacacctctaccctcagtttatgggaatgttgaaaggaaa
tttggattatcccaactcaacattgtacataactgaggccaaaatggtac
ttaggtatttcagctcatggacagattgggtaccaagaaacaaaatcata
gacaatagtattgaaaggtatacagatatagctttaaaggggtcccttta
ataatcccaaatgtccctaattgtcataggagtcttatttaagaaaggta
gagactgtctttttaaaagcaattatcataattacttataataatttgca
aagcttgtggataaattatcacattaactaattggcagagggttattaca
cttatgagacccttataaagtcagtagaagttcataaattcgagatttat
gagctgaaagtcctacatttacgcttctcatactgattgactctatggca
atagacttattcatagtcaagacattcacagtttaggactaaacagtaga
gaattatgccaacgactcagaatatgaagttcatctttttccacccttca
tatttatgcgactatttaaagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_72600901_72602042
seq2: B6Ng01-028I20.g_68_1189 (reverse)

seq1  ACTTTAAAATAGTCGCCATAAATAGTGAGGGTGGAGAAAAGAATGAACTG  50
      ||||| ||||||||| ||||||||   |||||||| ||||| ||||||| 
seq2  ACTTT-AAATAGTCG-CATAAATATGAAGGGTGGA-AAAAG-ATGAACT-  45

seq1  TCATATTTCTGAGTTCTGTTGGCACTAATTCTCTACTTGTTTAGTTCCTA  100
      ||||| ||||||||   ||||||| ||||||||||| ||||||| |||| 
seq2  TCATA-TTCTGAGT--CGTTGGCA-TAATTCTCTAC-TGTTTAG-TCCT-  88

seq1  AAACTGTGAATGTCTTTGACTATGAAT-AGTCCTTATTTGCCATTAGAGT  149
      |||||||||||||| |||||||||||| ||||  || |||||| ||||||
seq2  AAACTGTGAATGTC-TTGACTATGAATAAGTC--TA-TTGCCA-TAGAGT  133

seq1  CCAATCAGTATGAGAAGCGTAAATGTAGGACTTTCAGCTTCATAAATTCT  199
       ||||||||||||||||||||||||||||||||||||| ||||||| |||
seq2  -CAATCAGTATGAGAAGCGTAAATGTAGGACTTTCAGC-TCATAAA-TCT  180

seq1  CGAATTTATGAACTTCTACTGACTTTATAAGGGTCTCAATAAGTGTAATA  249
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CGAATTTATGAACTTCTACTGACTTTATAAGGGTCTC-ATAAGTGTAATA  229

seq1  ACCCTCTGCCAATTAGTTAATGTGATAATTTATCCACAAGCTTTGCAAAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTCTGCCAATTAGTTAATGTGATAATTTATCCACAAGCTTTGCAAAT  279

seq1  TATTATAAGTAATTATGATAATTGCTTTTAAAAAGGCAGTCTCTACCTTT  349
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TATTATAAGTAATTATGATAATTGCTTTTAAAAAGACAGTCTCTACCTTT  329

seq1  CTTAAATAAGACTCCTATGACAATTAGGGACATTTGGGATTATTAAAGGG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAATAAGACTCCTATGACAATTAGGGACATTTGGGATTATTAAAGGG  379

seq1  ACCCCTTTAAAGCTATATCTGTATACCTTTCAATACTATTGTCTATGATT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCTTTAAAGCTATATCTGTATACCTTTCAATACTATTGTCTATGATT  429

seq1  TTGTTTCTTGGTACCCAATCTGTCCATGAGCTGAAATACCTAAGTACCAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTCTTGGTACCCAATCTGTCCATGAGCTGAAATACCTAAGTACCAT  479

seq1  TTTGGCCTCAGTTATGTACAATGTTGAGTTGGGATAATCCAAATTTCCTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGCCTCAGTTATGTACAATGTTGAGTTGGGATAATCCAAATTTCCTT  529

seq1  TCAACATTCCCATAAACTGAGGGTAGAGGTGTTTTATAAATAGAGAAATT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACATTCCCATAAACTGAGGGTAGAGGTGTTTTATAAATAGAGAAATT  579

seq1  AACTATAGTCAGGAAGCCAGGGCTTCCGATTTTTATGAAATAATATCTTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATAGTCAGGAAGCCAGGGCTTCCGATTTTTATGAAATAATATCTTT  629

seq1  GTAATTATGCTGACATCTGACTCAACATGGTTAGATAATTTACAAGAATT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTATGCTGACATCTGACTCAACATGGTTAGATAATTTACAAGAATT  679

seq1  TGCTTCTGTGGACAACATCTGCTGTTGTTGTATATAATTTGCTGAGTGTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCTGTGGACAACATCTGCTGTTGTTGTATATAATTTGCTGAGTGTT  729

seq1  GTATTCCTAGTAGAATATATATTTTGATTATTGGATAGTCAGCATCTTTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTCCTAGTAGAATATATATTTTGATTATTGGATAGTCAGCATCTTTT  779

seq1  AAACTTCAACTTACTTTTCAACTTGTCCTTATTAATGACCAGAAGTTCTA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTCAACTTACTTTTCAACTTGTCCTTATTAATGACCAGAAGTTCTA  829

seq1  TATTAATCGTGAATGTATGGCTTCTCATATGATGGGCATTTCTTGTGATG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAATCGTGAATGTATGGCTTCTCATATGATGGGCATTTCTTGTGATG  879

seq1  ATCCTAAACTTTCTACTATTGAGAAAATTACCTCTTCTACTGCCCCTTTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTAAACTTTCTACTATTGAGAAAATTACCTCTTCTACTGCCCCTTTT  929

seq1  CATGGGGAGTGCACTACAAAGAAATAGGATGAAAGAAACTGGGCAGAGTC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGGGAGTGCACTACAAAGAAATAGGATGAAAGAAACTGGGCAGAGTC  979

seq1  TAGACTGAAGTATATTTTGTTTAAACTAGCTTCAAGATTACTCTGAAGTT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACTGAAGTATATTTTGTTTAAACTAGCTTCAAGATTACTCTGAAGTT  1029

seq1  CTGCCCTAAAAAGAGTTAAATATGAAAAGAATTACAGACCTAAACTTTTC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCTAAAAAGAGTTAAATATGAAAAGAATTACAGACCTAAACTTTTC  1079

seq1  AGGAAATAAAATGTTGATCATCACTCCTTGTGTCCATGAATTC  1142
      |||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAATAAAATGTTGATCATCACTCCTTGTGTCCATGAATTC  1122