BAC Information

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BAC

Clone NameB6Ng01-028J07
Chromosome4 (Build37)
Map Location 97,247,406 - 97,248,356
singlet/doubletsinglet
Overlap genenone
Upstream geneCyp2j9, Cyp2j5, LOC100039415, LOC620779, LOC620883, EG638698
Downstream geneNfia, LOC100039459, LOC669426, LOC384106, 0610025J13Rik, Tm2d1, Inadl
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-028J07.bB6Ng01-028J07.g
ACCDH859021DH859022
length9511,153
definitionDH859021|Mus musculus domesticus DNA, BAC clone: B6Ng01-028J07, 5' end.DH859022|Mus musculus domesticus DNA, BAC clone: B6Ng01-028J07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagtagctgtctagacttcttcccatttaaaaaaaaaaacaaaac
aaaacatttttctagtatttcttatagatagatccatattattacatttt
tttcaggccaaaaaaatttttggcataacttaaagtaaattcctataaat
aagatgactgggttacagtatggaaatcagagttaaattttcctgattga
atagactcttatatcaaacttaactgcaactgtgtaaaatgaattgataa
aagactgcttactttattaataaagattgaagatgtccagaattcatttc
tacggcatcgaataaaaaaatgtagttatataggctagtgttggctagaa
cgcacaccgcgccagcaatgtactactttactcccatgaaaacacaacga
aacacagtgccaactgaaccagaaagcaagggactctgaggctggcgtcc
tgtatttaggttctttcataaccaaattaactaatgaattaattaaaaat
tttaaaaatacacaacaacaataacaaccaaaaccacaaacaaggtataa
aaagagaaataattttcccctggaatctttttttttttttctccttggaa
aacctgttcggttattcccagatttagttttagactctttgctttgcttc
caagggagatgtgtagcacagcaaaacctaagcaacaaacactttctaaa
atgcgcagttcacaatcttgaggagggtggctgtgaaagacagatactga
atcagacttagagtctgagttggggggagggaaaaaaaagccccaaacgt
tgcatgatagtctctaagcagttccatctgtcaggcagaaattttaggct
aatagcctgtggcgatctccctccgcagtccactacctgcctttgtccta
ttaaatctctttattctccttaaaaaaaaaaaagcagggggggggggggt
g
gaattctttgggtatatgcccaggaatggaatattgagtctcatgataac
tatttgtagttttttggggaaacctctacactgatttccatgctggattc
accaatttacatgtctactgatagtgaataaggactccccttttttttca
tgtccttgccagcatttgttgttattttgactggggtaagatagaatctc
aaagtagttttaatatgcatttccgtgatgtctaatgatgttgaacactt
tgagctctttttaaaagcagtttatataccatttgtatttctcctctgag
aactctctgttcaatatatggccaacacacagataaatacaaacaattaa
aaacccttatagcatatgccttcaaatggaggagtccaggttacaaaaca
atacattaactacacagtacagcggaagggaattgatatgtaaaaatagg
aatgggcaaataaaataaaagattcttgaaatcttattttattttataca
tagagactctacaaatgataaaatcattctctgttgcccaggctgaccct
gatctgtctggattcaaatgttcttcctgcctcagtctaacaattttcct
tgttatagttttattataaaacttcctccagaggctcatgtatttgaaca
gctagtttcagatgatagaaatgttctgaaaggttgtggggcacttgaga
tgtatggccaatctagcagaagtgagtttgttgggcatgagccttgactg
agatagcccatcactggtttggtttagtcctctctgcttcagtttcacca
caatgtgagaagctactatctccagctcttccgtgttatacatgaaaatg
tcccagctgccatacctctcctccatcatggaccatatcttccaaaatgt
tagtcaactcttttgtgctgattgggtaggtttttgttgttgttttgctt
tgtcagttatagtcatctgggaaagagaacaacactgactgcttccttag
actgatctgcaggccagtctgtgggtttttttctgactattgatgatctg
agactggttctgtgcatgcatcttggcagtgtctggtctactgaatgggt
ctgacaaggatggaactagtacgaacattgttttccatgaatttgtcact
cca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_97247406_97248356
seq2: B6Ng01-028J07.b_42_991

seq1  GAATTCAGTAGCTGTCTAGACTTCTTCCCATTTAAAAAAAAAAACAAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTAGCTGTCTAGACTTCTTCCCATTTAAAAAAAAAAACAAAAC  50

seq1  AAAACATTTTTCTAGTATTTCTTATAGATAGATCCATATTATTACATTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACATTTTTCTAGTATTTCTTATAGATAGATCCATATTATTACATTTT  100

seq1  TTTCAGGCCAAAAAAATTTTTGGCATAACTTAAAGTAAATTCCTATAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGGCCAAAAAAATTTTTGGCATAACTTAAAGTAAATTCCTATAAAT  150

seq1  AAGATGACTGGGTTACAGTATGGAAATCAGAGTTAAATTTTCCTGATTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGACTGGGTTACAGTATGGAAATCAGAGTTAAATTTTCCTGATTGA  200

seq1  ATAGACTCTTATATCAAACTTAACTGCAACTGTGTAAAATGAATTGATAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGACTCTTATATCAAACTTAACTGCAACTGTGTAAAATGAATTGATAA  250

seq1  AAGACTGCTTACTTTATTAATAAAGATTGAAGATGTCCAGAATTCATTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTGCTTACTTTATTAATAAAGATTGAAGATGTCCAGAATTCATTTC  300

seq1  TACGGCATCGAATAAAAAAATGTAGTTATATAGGCTAGTGTTGGCTAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGGCATCGAATAAAAAAATGTAGTTATATAGGCTAGTGTTGGCTAGAA  350

seq1  CGCACACCGCGCCAGCAATGTACTACTTTACTCCCATGAAAACACAACGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCACACCGCGCCAGCAATGTACTACTTTACTCCCATGAAAACACAACGA  400

seq1  AACACAGTGCCAACTGAACCAGAAAGCAAGGGACTCTGAGGCTGGCGTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAGTGCCAACTGAACCAGAAAGCAAGGGACTCTGAGGCTGGCGTCC  450

seq1  TGTATTTAGGTTCTTTCATAACCAAATTAACTAATGAATTAATTAAAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTTAGGTTCTTTCATAACCAAATTAACTAATGAATTAATTAAAAAT  500

seq1  TTTAAAAATACACAACAACAATAACAACCAAAACCACAAACAAGGTATAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAATACACAACAACAATAACAACCAAAACCACAAACAAGGTATAA  550

seq1  AAAGAGAAATAATTTTCCCCTGGAATCTTTTTTTTTTTTTCTCCTTGGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGAAATAATTTTCCCCTGGAATCTTTTTTTTTTTTTCTCCTTGGAA  600

seq1  AACCTGTTCGGTTATTCCCAGATTTAGTTTTAGACTCTTTGCTTTGCTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGTTCGGTTATTCCCAGATTTAGTTTTAGACTCTTTGCTTTGCTTC  650

seq1  CAAGGGAGATGTGTAGCACAGCAAAACCTAAGCAACAAACACTTTCTAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGAGATGTGTAGCACAGCAAAACCTAAGCAACAAACACTTTCTAAA  700

seq1  ATGCGCAGTTCACAATCTTGAGGAGGGTGGCTGTGAAAGACAGATACTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCGCAGTTCACAATCTTGAGGAGGGTGGCTGTGAAAGACAGATACTGA  750

seq1  ATCAGACTTAGAGTCTGAGTTGGGGGGAGGGAAAAAAAAGCCCCAAACGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGACTTAGAGTCTGAGTTGGGGGGAGGGAAAAAAAAGCCCCAAACGT  800

seq1  TGCATGATAGTCTCTAAGCAGTTCCATCTGTCAGGCAGAAATTTTAGGCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGATAGTCTCTAAGCAGTTCCATCTGTCAGGCAGAAATTTTAGGCT  850

seq1  AATAGCCTGTGGCGATCTCCCTCCGCAGTCCACTACCTGCCTTTGTCCTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGCCTGTGGCGATCTCCCTCCGCAGTCCACTACCTGCCTTTGTCCTA  900

seq1  TTAAATCTCTTTATTCTCCTTAAAAAAAAAAAAAGCAAGGGGGGGGGGGG  950
      ||||||||||||||||||||| ||||||||||||||| ||||||||||||
seq2  TTAAATCTCTTTATTCTCCTT-AAAAAAAAAAAAGCAGGGGGGGGGGGGG  949

seq1  T  951
      |
seq2  T  950