BAC Information

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BAC

Clone NameB6Ng01-028M15
Chromosome4 (Build37)
Map Location 128,319,928 - 128,467,690
singlet/doubletdoublet
Overlap genePhc2, A3galt2, BC039093
Upstream geneLOC635169, 4930465A12Rik, Hmgb4, 4930546G22Rik, Zscan20, Tlr12
Downstream geneLOC667354, Trim62, Adc, Ak2, Ibrdc3, Tmem54, Hpca, Fndc5, S100pbp, Yars, C77080, Sync, Rbbp4, Zbtb8os, 2410081M15Rik, LOC100039588, Zbtb8, Bsdc1, Tssk3, 1700125D06Rik, Marcksl1, Hdac1, Lck, BC030183, Eif3s2, 2510006D16Rik, LOC667452, Iqcc, Ccdc28b, Txlna, Kpna6, Tmem39b, Khdrbs1, LOC100040532
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-028M15.bB6Ng01-028M15.g
ACCDH859175DH859176
length7071,046
definitionDH859175|Mus musculus domesticus DNA, BAC clone: B6Ng01-028M15, 5' end.DH859176|Mus musculus domesticus DNA, BAC clone: B6Ng01-028M15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(128,466,982 - 128,467,690)(128,319,928 - 128,320,980)
sequence
gaattcctgacttttcagcctgggaatatgggtctctggactccgtggaa
ggcccatttggctgaggaatttgggtctcacggggtaaagaggtctcata
gctgatagtgacaggtgctctcccttcctgcaggatggccgaacctcgat
ttaacaacccgtacttctggccccctcctcccaccatgccgagccaggta
agactgacatcgccagtccctgctgccttccatgggagctactatgcttt
gcctggggcttgggcagtagcttgcaagggagagagccctggggtgcggc
ccacccattccaatttggctcctctcccttctgcagctggacaacctggt
cctgattaacaagatcaaagagcagctgatggctgaaaagatccggccac
ctcacctgccacccacctcagcctcatcgcagcagccactgctagtccct
cccgcgcccgccgagagcagccaggcggtcatgtcgctgcccaagctgca
gcaggtgcccgggctgcacccgcagtccgtgccgcagcccgacgtggcac
tgcacgcgaggccggccaccagtactgtcacaggtaacctgagtgggcag
ggctggaggtggtaggggaagtgggtggggcctagggagtgggcggggct
ggcaaggttgttaataatgttcgggcggaatctagtccagtagaattttg
ctgtttg
gaattcctggcaacaaggctgggtcgtagtcatctctgtagctgcagcat
gcaggaagggccacccactttaggctgaagggttgaatggatgagcaaat
gaacagagatggacagtttagtgagactgtttgtggcgagggaaaaatac
gtaagctaaacactgtgtctcagataacccagactggcttcaaactcact
gtacagataagaatgcccttgaacttctcaccctcctgcctctgtctccc
aagtgctgggactataagtgtgtataggtgtcctcttttaggtagttcta
gggatcaaacccagggcttcatgaatgttaggtgagcactctaccatctg
agccccagccccagtcccagccctgaagacagttttgacgtcttcattag
aacaatttctaagattccactggaagcagtgaagtttgatattaatttct
tgaagcttattacggtttgaatgtgtccctccccccacccctgcattctt
ggactgaaaactgcaaatccatgttactggtattcaaaggcagagccttg
agaaagtacgatttgaaaaaatagtgagggggggggctctctatagaagg
aaagggagagatagatccaagctagcagacttgctctgtcttgtcatggg
aagtcctctgccatgctaagatgtatcagaaagaccctcaacagaggaga
gatgctggcatcccgcccttagacgtcctagcctccaaaaaggtaagcta
aacagagctcctttataaactacctcatagtagcatgagaagacagatta
aggcacagccaccaaactaagacccgatttagggtcacaccttgtcatct
agagccagctgagacccagagcgattaaccagctctagcttcgaatgagg
agttaacagcaaagcctgacgcagctctaagcctgctgagtttagtcgca
gcctcctcctctcttctacacctacagctgatcctaaacttaatcctgga
atcttccttcggctgtatcagcaaacatatatcataagttagactt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_128466982_128467690
seq2: B6Ng01-028M15.b_48_754 (reverse)

seq1  CAAACAGTCAAGTTCTACCTGGACTAGATTCCGCCCCAACATTCTTAACA  50
      |||||||  || ||||| |||||||||||||||||| |||||| ||||||
seq2  CAAACAGCAAAATTCTA-CTGGACTAGATTCCGCCCGAACATTATTAACA  49

seq1  GACCTTGCCAGCCCCGCCCACTCCCTAGGCCCCACCCACTTCCCCTACCA  100
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -ACCTTGCCAGCCCCGCCCACTCCCTAGGCCCCACCCACTTCCCCTACCA  98

seq1  CCTCCAGCCCTGCCCACTCAGGTTACCTGTGACAGTACTGGTGGCCGGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCAGCCCTGCCCACTCAGGTTACCTGTGACAGTACTGGTGGCCGGCC  148

seq1  TCGCGTGCAGTGCCACGTCGGGCTGCGGCACGGACTGCGGGTGCAGCCCG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCGTGCAGTGCCACGTCGGGCTGCGGCACGGACTGCGGGTGCAGCCCG  198

seq1  GGCACCTGCTGCAGCTTGGGCAGCGACATGACCGCCTGGCTGCTCTCGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACCTGCTGCAGCTTGGGCAGCGACATGACCGCCTGGCTGCTCTCGGC  248

seq1  GGGCGCGGGAGGGACTAGCAGTGGCTGCTGCGATGAGGCTGAGGTGGGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCGCGGGAGGGACTAGCAGTGGCTGCTGCGATGAGGCTGAGGTGGGTG  298

seq1  GCAGGTGAGGTGGCCGGATCTTTTCAGCCATCAGCTGCTCTTTGATCTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGTGAGGTGGCCGGATCTTTTCAGCCATCAGCTGCTCTTTGATCTTG  348

seq1  TTAATCAGGACCAGGTTGTCCAGCTGCAGAAGGGAGAGGAGCCAAATTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATCAGGACCAGGTTGTCCAGCTGCAGAAGGGAGAGGAGCCAAATTGG  398

seq1  AATGGGTGGGCCGCACCCCAGGGCTCTCTCCCTTGCAAGCTACTGCCCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGTGGGCCGCACCCCAGGGCTCTCTCCCTTGCAAGCTACTGCCCAA  448

seq1  GCCCCAGGCAAAGCATAGTAGCTCCCATGGAAGGCAGCAGGGACTGGCGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCAGGCAAAGCATAGTAGCTCCCATGGAAGGCAGCAGGGACTGGCGA  498

seq1  TGTCAGTCTTACCTGGCTCGGCATGGTGGGAGGAGGGGGCCAGAAGTACG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGTCTTACCTGGCTCGGCATGGTGGGAGGAGGGGGCCAGAAGTACG  548

seq1  GGTTGTTAAATCGAGGTTCGGCCATCCTGCAGGAAGGGAGAGCACCTGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGTTAAATCGAGGTTCGGCCATCCTGCAGGAAGGGAGAGCACCTGTC  598

seq1  ACTATCAGCTATGAGACCTCTTTACCCCGTGAGACCCAAATTCCTCAGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATCAGCTATGAGACCTCTTTACCCCGTGAGACCCAAATTCCTCAGCC  648

seq1  AAATGGGCCTTCCACGGAGTCCAGAGACCCATATTCCCAGGCTGAAAAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGGCCTTCCACGGAGTCCAGAGACCCATATTCCCAGGCTGAAAAGT  698

seq1  CAGGAATTC  709
      |||||||||
seq2  CAGGAATTC  707

seq1: chr4_128319928_128320980
seq2: B6Ng01-028M15.g_68_1113

seq1  GAATTCCTGGCAACAAGGCTGGGTCGTAGTCATCTCTGTAGCTGCAGCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGGCAACAAGGCTGGGTCGTAGTCATCTCTGTAGCTGCAGCAT  50

seq1  GCAGGAAGGGCCACCCACTTTAGGCTGAAGGGTTGAATGGATGAGCAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGAAGGGCCACCCACTTTAGGCTGAAGGGTTGAATGGATGAGCAAAT  100

seq1  GAACAGAGATGGACAGTTTAGTGAGACTGTTTGTGGCGAGGGAAAAATAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAGAGATGGACAGTTTAGTGAGACTGTTTGTGGCGAGGGAAAAATAC  150

seq1  GTAAGCTAAACACTGTGTCTCAGATAACCCAGACTGGCTTCAAACTCACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGCTAAACACTGTGTCTCAGATAACCCAGACTGGCTTCAAACTCACT  200

seq1  GTACAGATAAGAATGCCCTTGAACTTCTCACCCTCCTGCCTCTGTCTCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAGATAAGAATGCCCTTGAACTTCTCACCCTCCTGCCTCTGTCTCCC  250

seq1  AAGTGCTGGGACTATAAGTGTGTATAGGTGTCCTCTTTTAGGTAGTTCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGCTGGGACTATAAGTGTGTATAGGTGTCCTCTTTTAGGTAGTTCTA  300

seq1  GGGATCAAACCCAGGGCTTCATGAATGTTAGGTGAGCACTCTACCATCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATCAAACCCAGGGCTTCATGAATGTTAGGTGAGCACTCTACCATCTG  350

seq1  AGCCCCAGCCCCAGTCCCAGCCCTGAAGACAGTTTTGACGTCTTCATTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCCAGCCCCAGTCCCAGCCCTGAAGACAGTTTTGACGTCTTCATTAG  400

seq1  AACAATTTCTAAGATTCCACTGGAAGCAGTGAAGTTTGATATTAATTTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATTTCTAAGATTCCACTGGAAGCAGTGAAGTTTGATATTAATTTCT  450

seq1  TGAAGCTTATTACGGTTTGAATGTGTCCCTCCCCCCACCCCTGCATTCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCTTATTACGGTTTGAATGTGTCCCTCCCCCCACCCCTGCATTCTT  500

seq1  GGACTGAAAACTGCAAATCCATGTTACTGGTATTCAAAGGCAGAGCCTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTGAAAACTGCAAATCCATGTTACTGGTATTCAAAGGCAGAGCCTTG  550

seq1  AGAAAGTACGATTTGAAAAAATAGTGAGGGGGGGGGCTCTCTATAGAAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGTACGATTTGAAAAAATAGTGAGGGGGGGGGCTCTCTATAGAAGG  600

seq1  AAAGGGAGAGATAGATCCAAGCTAGCAGACTTGCTCTGTCTTGTCATGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGAGAGATAGATCCAAGCTAGCAGACTTGCTCTGTCTTGTCATGGG  650

seq1  AAGTCCTCTGCCATGCTAAGATGTATCAGAAAGACCCTCAACAGAGGAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCCTCTGCCATGCTAAGATGTATCAGAAAGACCCTCAACAGAGGAGA  700

seq1  GATGCTGGCATCCCGCCCTTAGACGTCCTAGCCTCCAAAAAGGTAAGCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTGGCATCCCGCCCTTAGACGTCCTAGCCTCCAAAAAGGTAAGCTA  750

seq1  AACAGAGCTCCTTTATAAACTACCTCATAGTAGCATGAGAAGACAGATTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAGCTCCTTTATAAACTACCTCATAGTAGCATGAGAAGACAGATTA  800

seq1  AGGCACAGCCACCAAACTAAGACCCGATTTAGGGTCACACCTTGTCATCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCACAGCCACCAAACTAAGACCCGATTTAGGGTCACACCTTGTCATCT  850

seq1  AGAGCCAGCTGAGACCCAGAGCGATTAACCAGCTCTAGCTTCGAATGAGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCAGCTGAGACCCAGAGCGATTAACCAGCTCTAGCTTCGAATGAGG  900

seq1  AGTTAACAGCAAAGCCCTGACGCAGGCCCTAAGCCTGCTGAGTTTAGTCG  950
      |||||||||||||| ||||||||| || ||||||||||||||||||||||
seq2  AGTTAACAGCAAAG-CCTGACGCA-GCTCTAAGCCTGCTGAGTTTAGTCG  948

seq1  CAGCCCTCCCCTCTCTTCCTACACCCTACAGGCTGATCCTAAACTTAATC  1000
      |||||  | |||||||| ||||| |||||| |||||||||||||||||||
seq2  CAGCCTCCTCCTCTCTT-CTACA-CCTACA-GCTGATCCTAAACTTAATC  995

seq1  CTGGATTCCTTCCCTCTGCTGTTATCAGCAAAACATATA-CATAAGTTAG  1049
      ||||| | ||||| || |||| ||||||| ||||||||| ||||||||||
seq2  CTGGAAT-CTTCCTTCGGCTG-TATCAGC-AAACATATATCATAAGTTAG  1042

seq1  ACTT  1053
      ||||
seq2  ACTT  1046