BAC Information

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BAC

Clone NameB6Ng01-029K11
Chromosome4 (Build37)
Map Location 90,472,174 - 90,473,374
singlet/doubletsinglet
Overlap genenone
Upstream geneZfp352, LOC619842, LOC435792
Downstream genePpia-ps4_804.1, LOC664840, LOC664848, LOC100042274, Elavl2, LOC664864, LOC620016
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-029K11.bB6Ng01-029K11.g
ACCDH859796DH859797
length1,1811,213
definitionDH859796|Mus musculus domesticus DNA, BAC clone: B6Ng01-029K11, 5' end.DH859797|Mus musculus domesticus DNA, BAC clone: B6Ng01-029K11, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttaatctttctcttagctctaggattttacctggcatttcagta
cattacttgctaaagtaagtcttgattcagtggcaggatgagtcctttga
tttatgtatgagttcaaaatagttctgaaatttaatatgtactttatggt
aaaagtgcttacagtagaggcaaacaagtaagtaaagggaaatttgtgtc
aactgctttctaaaaatttgtttttactttgtaataagcctttaagtttc
cactaatttaaatggaatctttggactcatatttaatggatatgtcaggg
ttctgttgcagtttttgtggaaatggtagcctgggtgtactttggaatgc
cttgaaagtttgccaatggtctttgggataaaaagatgttacttttatca
ctaaaagggtattattcctacctaataatgacaacagtaattttatgctt
ggtataataaatgtccataaaacatttcacaaatatttttgtataactga
ggatattgtaagtaatacatttgcagtactgatttttcttaagacaaagt
gatatgtatataactatataaataagcctaaaaaactactgcagagatct
aagtctatttgtaaatggtataagttttattgaaatacaattttaattaa
tggaatatttttgcattgttaaaatattttaaggatgtttaaaggtttaa
tacttcagacacataaaaaaaagtaaaactaagaatgctaaagaaaatta
ttttggtggagaattttaagccaccattctaagctccatgaggaatttca
ttgcctaaccttctattctaaatacttccttaaatgttcaagctagacaa
ctaagttacccagctaatgaaaagtagccagaggagcaagttacctaggt
agtgaaaagtaacctctggtctacctctctcatgacctaggacctagtat
actacaagtcaaacacaataacttggctcttttattttctttctgcctgc
aacagtgagaaagagaaagtaggtgattgtcttactgtacagaagtcaaa
cttcttccaggtgggtgttttgtaggaagagggaagagagacagtatgtc
acttagaacttattctgagacacagtgtctggaggtggctcacagcagca
ctttccattgaccatacacatggaaactttg
gaattcctgatctttccagaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattaaggatttttgc
atcgatgttcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagaataccttctacttctatcttgtgaaaaagtttgtgcagaactgg
agttagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgggctttttttggctgggagactattaataactgcttctatttct
ttaggggatatgggactgtttagaaggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttaat
taggattttgtccctgtgccctttagtgagtctagctaaggggtttatct
atcttgttgattttctcaaagaaccaactcctcgtttggttaattcttga
atagttcttcttgtttccacttggttgatttcacccctgagtttgattat
ttcctgccgtctactcctcttgggtgaatttgcttccttttttctagagc
ttttagatgtgttgtcaagctgctagtatgtgctctcttccgtttttctt
ggagcactcatagctatgagtttcctctagaaaatgctttcatttggtcc
caaggttggggtacgttgtggctttcttttcattaactcttaaaagctct
tagttcttccttatcctcctgacaagtatctatgaaagaggtgttagatc
tgtgcagttgggctttcgtatttatttgtttgagatcacctaagtcagga
ttgagagtccgcaattacaattgaacgtcagcttggtgtcctttggccta
tgtaggtacggac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_90472174_90473374
seq2: B6Ng01-029K11.b_42_1222

seq1  GAATTCTTAATCTTTCTCTTAGCTCTAGGATTTTACCTGGCATTTCAGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAATCTTTCTCTTAGCTCTAGGATTTTACCTGGCATTTCAGTA  50

seq1  CATTACTTGCTAAAGTAAGTCTTGATTCAGTGGCAGGATGAGTCCTTTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTACTTGCTAAAGTAAGTCTTGATTCAGTGGCAGGATGAGTCCTTTGA  100

seq1  TTTATGTATGAGTTCAAAATAGTTCTGAAATTTAATATGTACTTTATGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGTATGAGTTCAAAATAGTTCTGAAATTTAATATGTACTTTATGGT  150

seq1  AAAAGTGCTTACAGTAGAGGCAAACAAGTAAGTAAAGGGAAATTTGTGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTGCTTACAGTAGAGGCAAACAAGTAAGTAAAGGGAAATTTGTGTC  200

seq1  AACTGCTTTCTAAAAATTTGTTTTTACTTTGTAATAAGCCTTTAAGTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGCTTTCTAAAAATTTGTTTTTACTTTGTAATAAGCCTTTAAGTTTC  250

seq1  CACTAATTTAAATGGAATCTTTGGACTCATATTTAATGGATATGTCAGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAATTTAAATGGAATCTTTGGACTCATATTTAATGGATATGTCAGGG  300

seq1  TTCTGTTGCAGTTTTTGTGGAAATGGTAGCCTGGGTGTACTTTGGAATGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTTGCAGTTTTTGTGGAAATGGTAGCCTGGGTGTACTTTGGAATGC  350

seq1  CTTGAAAGTTTGCCAATGGTCTTTGGGATAAAAAGATGTTACTTTTATCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAAAGTTTGCCAATGGTCTTTGGGATAAAAAGATGTTACTTTTATCA  400

seq1  CTAAAAGGGTATTATTCCTACCTAATAATGACAACAGTAATTTTATGCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAAGGGTATTATTCCTACCTAATAATGACAACAGTAATTTTATGCTT  450

seq1  GGTATAATAAATGTCCATAAAACATTTCACAAATATTTTTGTATAACTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATAATAAATGTCCATAAAACATTTCACAAATATTTTTGTATAACTGA  500

seq1  GGATATTGTAAGTAATACATTTGCAGTACTGATTTTTCTTAAGACAAAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATATTGTAAGTAATACATTTGCAGTACTGATTTTTCTTAAGACAAAGT  550

seq1  GATATGTATATAACTATATAAATAAGCCTAAAAAACTACTGCAGAGATCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATGTATATAACTATATAAATAAGCCTAAAAAACTACTGCAGAGATCT  600

seq1  AAGTCTATTTGTAAATGGTATAAGTTTTATTGAAATACAATTTTAATTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTATTTGTAAATGGTATAAGTTTTATTGAAATACAATTTTAATTAA  650

seq1  TGGAATATTTTTGCATTGTTAAAATATTTTAAGGATGTTTAAAGGTTTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATATTTTTGCATTGTTAAAATATTTTAAGGATGTTTAAAGGTTTAA  700

seq1  TACTTCAGACACATAAAAAAAAGTAAAACTAAGAATGCTAAAGAAAATTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTCAGACACATAAAAAAAAGTAAAACTAAGAATGCTAAAGAAAATTA  750

seq1  TTTTGGTGGAGAATTTTAAGCCACCATTCTAAGCTCCATGAGGAATTTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGTGGAGAATTTTAAGCCACCATTCTAAGCTCCATGAGGAATTTCA  800

seq1  TTGCCTAACCTTCTATTCTAAATACTTCCTTAAATGTTCAAGCTAGACAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTAACCTTCTATTCTAAATACTTCCTTAAATGTTCAAGCTAGACAA  850

seq1  CTAAGTTACCCAGCTAATGAAAAGTAGCCAGAGGAGCAAGTTACCTAGGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGTTACCCAGCTAATGAAAAGTAGCCAGAGGAGCAAGTTACCTAGGT  900

seq1  AGTGAAAAGTAACCTCTGGTCTACCTCTCTCATGACCTAGGACCTAGTAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAAAAGTAACCTCTGGTCTACCTCTCTCATGACCTAGGACCTAGTAT  950

seq1  ACTACAAGTCAAACACAATAACTTGGTCTCTTTTATTTTCTTTCTGCCTG  1000
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  ACTACAAGTCAAACACAATAACTTGG-CTCTTTTATTTTCTTTCTGCCTG  999

seq1  CAAACAGTGAGAAAGAGACAGTAGGTGATTGTCTTTACTGTACAGAAGTC  1050
      | |||||||||||||||| |||||||||||||| ||||||||||||||||
seq2  C-AACAGTGAGAAAGAGAAAGTAGGTGATTGTC-TTACTGTACAGAAGTC  1047

seq1  AAAACTTCTTCCAGGTGGGTGTTTTGTAGGAAAGAGGGAGAGAG-GACAG  1099
       ||||||||||||||||||||||||||||| |||||||| |||| |||||
seq2  -AAACTTCTTCCAGGTGGGTGTTTTGTAGG-AAGAGGGA-AGAGAGACAG  1094

seq1  TTAATGTCATCTAGAACTTATTCTGAGACACAGTGTCTGAAGTTGG-TCA  1148
      |  ||||||  |||||||||||||||||||||||||||| || ||| |||
seq2  T--ATGTCACTTAGAACTTATTCTGAGACACAGTGTCTGGAGGTGGCTCA  1142

seq1  AAGCAAGCATACCTTTCAAAATGAGAACAAAATAAACAAACATGGAAACT  1198
       ||| ||||   |||||  | |||           | | |||||||||||
seq2  CAGC-AGCA---CTTTC-CATTGA---------CCATACACATGGAAACT  1178

seq1  TTG  1201
      |||
seq2  TTG  1181