MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-030E02
Chromosome	4 (Build37)
Map Location	60,448,159 - 60,449,128
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC634731, Rod1, Hsdl2, E130308A19Rik, LOC100041592, 1110054O05Rik, Snx30, Slc46a2, LOC100041656, Mup4, LOC620807, LOC100041658, LOC620846, Mup2, LOC620882, LOC100041687, LOC667221, LOC100038948
Downstream gene	LOC620997, Mup1, LOC620942, LOC100039008, LOC100039028, LOC620982, LOC100039054, LOC100039063, LOC667234, LOC100039089, LOC667239, LOC100039116, LOC667242, LOC100039150, LOC100039019, LOC100039177, LOC621093, LOC100039206, LOC621127, LOC100039228, LOC384021, LOC100039247
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC634731 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:634731
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 1 Protein

name	Rod1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:230257 MGI:1923334
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Hsdl2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72479 MGI:1919729
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	E130308A19Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:230259 MGI:2442164
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC100041592 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041592
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 Proteins pseudo : _no_value

name	1110054O05Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66209 MGI:1913459
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Snx30 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:209131 MGI:2443882
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc46a2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:30936 MGI:1353616
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041656 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041656
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Mup4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17843 MGI:97236
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC620807 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:620807
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041658 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041658
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 585 ESTs, 1 Protein

name	LOC620846 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:620846
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 21 Proteins pseudo : _no_value

name	Mup2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17841 MGI:97234
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC620882 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:620882
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 16 Proteins pseudo : _no_value

name	LOC100041687 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041687
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 574 ESTs, 1 Protein

name	LOC667221 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667221
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 2 Proteins pseudo : _no_value

name	LOC100038948 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100038948
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 586 ESTs, 1 Protein

name	LOC620997 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:620997
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 14 Proteins pseudo : _no_value

name	Mup1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17840 MGI:97233
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC620942 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:620942
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 17 Proteins pseudo : _no_value

name	LOC100039008 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039008
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 592 ESTs, 1 Protein

name	LOC100039028 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039028
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 565 ESTs, 1 Protein

name	LOC620982 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:620982
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 21 Proteins pseudo : _no_value

name	LOC100039054 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039054
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 578 ESTs, 1 Protein

name	LOC100039063 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039063
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 17 Proteins pseudo : _no_value

name	LOC667234 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667234
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 16 Proteins pseudo : _no_value

name	LOC100039089 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039089
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 570 ESTs, 1 Protein

name	LOC667239 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667239
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 16 Proteins pseudo : _no_value

name	LOC100039116 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039116
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 588 ESTs, 1 Protein

name	LOC667242 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667242
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 15 Proteins pseudo : _no_value

name	LOC100039150 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039150
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 586 ESTs, 1 Protein

name	LOC100039019 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039019
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 21 Proteins pseudo : _no_value

name	LOC100039177 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039177
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 564 ESTs, 1 Protein

name	LOC621093 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:621093
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 24 Proteins pseudo : _no_value

name	LOC100039206 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039206
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 556 ESTs, 1 Protein

name	LOC621127 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:621127
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 15 Proteins pseudo : _no_value

name	LOC100039228 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039228
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 568 ESTs, 1 Protein

name	LOC384021 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:384021
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 15 Proteins pseudo : _no_value

name	LOC100039247 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039247
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 596 ESTs, 1 Protein

name	LOC634731 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252426 GeneID:634731
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 1 Protein product : similar to sushi domain containing 1 transcript_id : XM_988632.2

name	Rod1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142389023 GeneID:230257 MGI:1923334
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ROD1 regulator of differentiation 1 (S. pombe) transcript_id : NM_178164.2

name	Rod1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21450284 GeneID:230257 MGI:1923334
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ROD1 regulator of differentiation 1 (S. pombe) transcript_id : NM_144904.1

name	Hsdl2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125656149 GeneID:72479 MGI:1919729
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hydroxysteroid dehydrogenase like 2 transcript_id : NM_024255.2

name	E130308A19Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:62821810 GeneID:230259 MGI:2442164
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA E130308A19 gene transcript_id : NM_001015681.1

name	E130308A19Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142370765 GeneID:230259 MGI:2442164
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA E130308A19 gene transcript_id : NM_153158.2

name	1110054O05Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:62526127 GeneID:66209 MGI:1913459
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1110054O05 gene transcript_id : NM_001013577.1

name	Snx30 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84781798 GeneID:209131 MGI:2443882
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sorting nexin family member 30 transcript_id : NM_172468.2

name	Slc46a2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142386973 GeneID:30936 MGI:1353616
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 46, member 2 transcript_id : NM_021053.3

name	Mup4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6678967 GeneID:17843 MGI:97236
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : major urinary protein 4 transcript_id : NM_008648.1

name	LOC620807 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:124486864 GeneID:620807
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : novel member of the major urinary protein (Mup) gene family transcript_id : NM_001081285.1

name	LOC100041658 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252428 GeneID:100041658
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 585 ESTs, 1 Protein product : similar to major urinary protein 1 transcript_id : XM_001476969.1

name	Mup2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113930711 GeneID:17841 MGI:97234
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : major urinary protein 2 transcript_id : NM_008647.3

name	Mup2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113930713 GeneID:17841 MGI:97234
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : major urinary protein 2 transcript_id : NM_001045550.1

name	LOC100041687 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252431 GeneID:100041687
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 574 ESTs, 1 Protein product : similar to major urinary protein 1 transcript_id : XM_001477004.1

name	LOC100038948 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252529 GeneID:100038948
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 586 ESTs, 1 Protein product : similar to major urinary protein 1 transcript_id : XM_001471958.1

name	Mup1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:13654244 GeneID:17840 MGI:97233
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : major urinary protein 1 transcript_id : NM_031188.1

name	LOC100039008 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252532 GeneID:100039008
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 592 ESTs, 1 Protein product : similar to major urinary protein 1 transcript_id : XM_001472055.1

name	LOC100039028 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252535 GeneID:100039028
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 565 ESTs, 1 Protein product : similar to major urinary protein 1 transcript_id : XM_001472078.1

name	LOC100039054 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252539 GeneID:100039054
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 578 ESTs, 1 Protein product : similar to major urinary protein 1 transcript_id : XM_001472149.1

name	LOC100039089 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252542 GeneID:100039089
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 570 ESTs, 1 Protein product : similar to major urinary protein 1 transcript_id : XM_001472190.1

name	LOC100039116 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252546 GeneID:100039116
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 588 ESTs, 1 Protein product : similar to major urinary protein 1 transcript_id : XM_001472209.1

name	LOC100039150 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252551 GeneID:100039150
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 586 ESTs, 1 Protein product : similar to major urinary protein 1 transcript_id : XM_001472263.1

name	LOC100039177 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252553 GeneID:100039177
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 564 ESTs, 1 Protein product : similar to major urinary protein 1 transcript_id : XM_001472299.1

name	LOC100039206 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252556 GeneID:100039206
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 556 ESTs, 1 Protein product : similar to major urinary protein 1 transcript_id : XM_001472354.1

name	LOC100039228 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252558 GeneID:100039228
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 568 ESTs, 1 Protein product : similar to major urinary protein 1 transcript_id : XM_001472374.1

name	LOC100039247 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252561 GeneID:100039247
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 596 ESTs, 1 Protein product : similar to major urinary protein 1 transcript_id : XM_001472422.1

name	LOC634731 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149252427 GeneID:634731
definition	codon_start : 1 product : hypothetical protein protein_id : XP_993726.2

name	Rod1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21450285 CCDS:CCDS18220.1 GeneID:230257 MGI:1923334
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA] GO_function : GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0006397 - mRNA processing [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : ROD1 regulator of differentiation 1 isoform 1 protein_id : NP_659153.1

name	Rod1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30039680 CCDS:CCDS18221.1 GeneID:230257 MGI:1923334
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA] GO_function : GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0006397 - mRNA processing [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : ROD1 regulator of differentiation 1 isoform 2 protein_id : NP_835458.1

name	Hsdl2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:125656150 GeneID:72479 MGI:1919729
definition	GO_component : GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0008152 - metabolism [Evidence IEA] codon_start : 1 note : hydroxysteroid dehydrogenase-like 2 protein product : hydroxysteroid dehydrogenase like 2 protein_id : NP_077217.2

name	E130308A19Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:62821811 CCDS:CCDS18223.1 GeneID:230259 MGI:2442164
definition	codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : hypothetical protein LOC230259 isoform 2 protein_id : NP_001015681.1

name	E130308A19Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:24233509 CCDS:CCDS18224.1 GeneID:230259 MGI:2442164
definition	codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : hypothetical protein LOC230259 isoform 1 protein_id : NP_694798.1

name	1110054O05Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:62526128 CCDS:CCDS18225.1 GeneID:66209 MGI:1913459
definition	codon_start : 1 product : hypothetical protein LOC66209 protein_id : NP_001013595.1

name	Snx30 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33859789 CCDS:CCDS18226.1 GeneID:209131 MGI:2443882
definition	GO_function : GO:0035091 - phosphoinositide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] codon_start : 1 note : novel PX domain containing protein product : sorting nexin family member 30 protein_id : NP_766056.1

name	Slc46a2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560331 CCDS:CCDS18227.1 GeneID:30936 MGI:1353616
definition	GO_component : GO:0009986 - cell surface [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0015520 - tetracycline:hydrogen antiporter activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0015904 - tetracycline transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation note : putative thymic stromal co-transporter TSCOT; thymic stromal cotransporter product : solute carrier family 46, member 2 protein_id : NP_066395.2

name	Mup4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678968 CCDS:CCDS18228.1 GeneID:17843 MGI:97236
definition	GO_function : GO:0005488 - binding [Evidence IEA]; GO:0005550 - pheromone binding [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 product : major urinary protein 4 protein_id : NP_032674.1

name	LOC620807 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:124486865 GeneID:620807
definition	codon_start : 1 product : similar to Major urinary protein 4 precursor (MUP 4) protein_id : NP_001074754.1

name	LOC100041658 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149252429 GeneID:100041658
definition	codon_start : 1 product : similar to major urinary protein 1 protein_id : XP_001477019.1

name	Mup2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113930714 GeneID:17841 MGI:97234
definition	GO_function : GO:0005488 - binding [Evidence IEA]; GO:0005550 - pheromone binding [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 note : 2610016E04Rik; novel member of the major urinary protein (Mup) gene family product : major urinary protein 2 protein_id : NP_001039015.1

name	Mup2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113930712 CCDS:CCDS18230.1 GeneID:17841 MGI:97234
definition	GO_function : GO:0005488 - binding [Evidence IEA]; GO:0005550 - pheromone binding [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 note : 2610016E04Rik; novel member of the major urinary protein (Mup) gene family product : major urinary protein 2 protein_id : NP_032673.3

name	LOC100041687 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149252432 GeneID:100041687
definition	codon_start : 1 product : similar to major urinary protein 1 protein_id : XP_001477054.1

name	LOC100038948 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149252530 GeneID:100038948
definition	codon_start : 1 product : similar to major urinary protein 1 protein_id : XP_001472008.1

name	Mup1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13654245 CCDS:CCDS18231.1 GeneID:17840 MGI:97233
definition	GO_function : GO:0005488 - binding [Evidence IEA]; GO:0005550 - pheromone binding [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation product : major urinary protein 1 protein_id : NP_112465.1

name	LOC100039008 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149252533 GeneID:100039008
definition	codon_start : 1 product : similar to major urinary protein 1 protein_id : XP_001472105.1

name	LOC100039028 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149252536 GeneID:100039028
definition	codon_start : 1 product : similar to major urinary protein 1 protein_id : XP_001472128.1

name	LOC100039054 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149252540 GeneID:100039054
definition	codon_start : 1 product : similar to major urinary protein 1 protein_id : XP_001472199.1

name	LOC100039089 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149252543 GeneID:100039089
definition	codon_start : 1 product : similar to major urinary protein 1 protein_id : XP_001472240.1

name	LOC100039116 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149252547 GeneID:100039116
definition	codon_start : 1 product : similar to major urinary protein 1 protein_id : XP_001472259.1

name	LOC100039150 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149252552 GeneID:100039150
definition	codon_start : 1 product : similar to major urinary protein 1 protein_id : XP_001472313.1

name	LOC100039177 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149252554 GeneID:100039177
definition	codon_start : 1 product : similar to major urinary protein 1 protein_id : XP_001472349.1

name	LOC100039206 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149252557 GeneID:100039206
definition	codon_start : 1 product : similar to major urinary protein 1 protein_id : XP_001472404.1

name	LOC100039228 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149252559 GeneID:100039228
definition	codon_start : 1 product : similar to major urinary protein 1 protein_id : XP_001472424.1

name	LOC100039247 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149252562 GeneID:100039247
definition	codon_start : 1 product : similar to major urinary protein 1 protein_id : XP_001472472.1

name	LOC100041592 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041592
definition	number : 1 pseudo : _no_value

name	LOC100041656 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041656
definition	number : 1 pseudo : _no_value

name	LOC100041656 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041656
definition	number : 2 pseudo : _no_value

name	LOC100041656 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041656
definition	number : 3 pseudo : _no_value

name	LOC620846 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:620846
definition	number : 1 pseudo : _no_value

name	LOC620846 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:620846
definition	number : 2 pseudo : _no_value

name	LOC620846 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:620846
definition	number : 3 pseudo : _no_value

name	LOC620846 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:620846
definition	number : 4 pseudo : _no_value

name	LOC620846 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:620846
definition	number : 5 pseudo : _no_value

name	LOC620846 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:620846
definition	number : 6 pseudo : _no_value

name	LOC620997 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:620997
definition	number : 1 pseudo : _no_value

name	LOC620997 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:620997
definition	number : 2 pseudo : _no_value

name	LOC620997 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:620997
definition	number : 3 pseudo : _no_value

name	LOC620997 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:620997
definition	number : 4 pseudo : _no_value

name	LOC620997 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:620997
definition	number : 5 pseudo : _no_value

name	LOC620997 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:620997
definition	number : 6 pseudo : _no_value

name	LOC667234 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667234
definition	number : 1 pseudo : _no_value

name	LOC667234 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667234
definition	number : 2 pseudo : _no_value

name	LOC667234 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667234
definition	number : 3 pseudo : _no_value

name	LOC667234 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667234
definition	number : 4 pseudo : _no_value

name	LOC667234 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667234
definition	number : 5 pseudo : _no_value

name	LOC667234 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667234
definition	number : 6 pseudo : _no_value

name	LOC620882 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149252430 GeneID:620882
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 16 Proteins product : similar to novel member of the major urinary protein (Mup) gene family pseudo : _no_value transcript_id : XR_032925.1

name	LOC667221 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149252433 GeneID:667221
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 2 Proteins product : similar to novel member of the major urinary protein (Mup) gene family pseudo : _no_value transcript_id : XR_035681.1

name	LOC620942 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149252531 GeneID:620942
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 17 Proteins product : similar to novel member of the major urinary protein (Mup) gene family pseudo : _no_value transcript_id : XR_030536.1

name	LOC620982 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149252537 GeneID:620982
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 21 Proteins product : similar to novel member of the major urinary protein (Mup) gene family pseudo : _no_value transcript_id : XR_030572.1

name	LOC100039063 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149252541 GeneID:100039063
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 17 Proteins product : similar to novel member of the major urinary protein (Mup) gene family pseudo : _no_value transcript_id : XR_030591.1

name	LOC667239 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:94371886 GeneID:667239
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 16 Proteins product : similar to novel member of the major urinary protein (Mup) gene family pseudo : _no_value transcript_id : XR_001996.1

name	LOC667242 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149252548 GeneID:667242
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 15 Proteins product : similar to novel member of the major urinary protein (Mup) gene family pseudo : _no_value transcript_id : XR_030627.1

name	LOC100039019 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149252534 GeneID:100039019
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 21 Proteins product : similar to Predicted gene, OTTMUSG00000007485 pseudo : _no_value transcript_id : XR_030567.1

name	LOC621093 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149252555 GeneID:621093
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 24 Proteins product : similar to novel member of the major urinary protein (Mup) gene family pseudo : _no_value transcript_id : XR_030662.1

name	LOC621127 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149252538 GeneID:621127
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 15 Proteins product : similar to Predicted gene, OTTMUSG00000007485 pseudo : _no_value transcript_id : XR_030587.1

name	LOC384021 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149252560 GeneID:384021
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 15 Proteins product : similar to novel member of the major urinary protein (Mup) gene family pseudo : _no_value transcript_id : XR_030697.1

clone name	MSMg01-130L09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351G03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-489E05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-349G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324J05
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-402J05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-154F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-466E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354L04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-421K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-379M16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-403F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-297L01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-138O15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-447P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-135M06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444H16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-111J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-218C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-299I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-352P10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-359N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-264D07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-092H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-092K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-420I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072A11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072B11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-495D04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-327K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017A14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-106C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201O15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003E12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-071E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-243L22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-224N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-105J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326A06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-076H06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-105F19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027P13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-286H10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246N17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230K01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257B04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-309F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-228G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-135C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159G02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-229F12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030E02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-183A07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-265H24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096J22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135J08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-296D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-118H02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334G13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-265M22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137J10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191D21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-136L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-178I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211H05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023A10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-050L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-283H20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272H12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-106E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-294L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138A13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-053F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-255K05
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-030E02.b	B6Ng01-030E02.g
ACC	DH860217	DH860218
length	970	1,068
definition	DH860217\|Mus musculus domesticus DNA, BAC clone: B6Ng01-030E02, 5' end.	DH860218\|Mus musculus domesticus DNA, BAC clone: B6Ng01-030E02, 3' end.
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattcaagaaggaggcaagtactagatacacttcatttcaactttacat cagctttatatggtatgtactattttatttttcttaccatagtattagtt aagactcagaaagattaagtaactgtataaggttatatagtcagtcaatg tgagaacttagatttaaacccaagactctctaactcaggagcctttgttc ttattgatgccactatacaggtctggatgttttttaccatgaaaggagga tgattaataggagaaagaagaataaacactgctgtacagcttcagacatt ttggactggccggtagtagcaaagaaactgcacatgggtttctttaaaat atggaggagttggtgtggttcaagactgaatgaggcatgacaactgtctc tctcttggtctacaagtgtttggtggatactaggggaatatcacgatctt ccctcctcttacttctcctccttctcctcctcctccttcttttccttacc attttcctccttcttctcttctttccctcattgttttttgttgttgttgt tgattatggtgtctgcctacctgttcacatgcttatgcctttcctagtat atgcagaagtcagaacaggaaaccaatatatccctctatctctttttact tcatccccttgagacagggtctccctctgaatctgagaattagtgtgttt cagataggctgcctatccactaggtctcagcaatgctccagtctctgcca tctacctagtgttggggttaaaagcagacatgaccagctttctaatgtga gctgaggtgggcttgagcttacactgagatttgaatggtcttctatctct ggctatcctcctgctccaccctcctgatctcttgggattatggggtggta gccctcatctggctatgaactattggttttccagtatggaactagaagtt gcttctacggctaaagcaac	gaattcctaatgactgaggagcaactaaagaaatgttcaacatccttagt catcagggaaatgcaaatcaaaacaaccctgagattctcacaccactcag aatagcgaagatcaaaatttcaggtgccagcagatgctggtgaggatgta gagaaagagcaacactcctccactgctggtgggattgcaagctggtacaa ccactctggaactcactctggaagtttctcagaaaactgtacatagcatt acctgaggacccagctaaaacactactgggcacctacccaaaagattcgc caacataaaactaggacacatgttccactacattcataacagtctttttt tataaaagccagaagctggaaagaacccagttgtccctcaacagaggaat gaatacagaaaatatggtacattaacacagtggagtactactcagatatt aaaaacaatgaatatataattcttaggaaaatgtttggaactagaaaata tcatcctaagtgaggtaattcaatcacaatagaacacacatagtatgcac tcactgataattggatagtagcccagaagctcaaaatatccaagatacaa ttcacagaccacatgaagctcaagaagaagtaagactaaagtttggatac tttggccctttcttagagggggaacaaaagacccataggaggagttcaga gacaaagtgtagaacagagattgaaggaaaggccattcagagactgcccc tcctggcatctatcccaaatacagtcaccaaatccagacactactgtgga tgccaacaggtgtttgctgacagaggctctaacagtgcctgacaaataca gaattaagtgtctcattcaccattggtattgaacaagtgtcccgaatgga ggagttagatatagtaccaagggatctgaagggtttgcaactcccaggag aacaactatatgaaacatgtgtaccccgagggcatagtactaaacccaac caaatagtactcttggaggaccctggtcctgcccattatgtagctgatga tggtctcgctgtgcacta
quality values	Open. Hide. 47 61 21 26 61 38 27 35 50 61 55 55 61 61 55 49 52 52 43 59 59 49 59 59 49 37 59 49 43 52 39 52 52 59 40 43 59 59 59 44 40 52 59 61 61 59 59 61 59 61 59 59 52 59 61 61 61 61 61 59 59 59 34 59 59 59 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 59 59 61 59 49 59 59 61 59 59 49 59 59 61 61 59 61 61 61 61 59 49 61 61 59 59 59 59 61 61 59 59 61 59 61 61 61 61 59 59 61 61 61 59 61 61 61 61 59 61 61 61 59 61 61 61 61 61 61 61 59 59 59 59 59 61 59 61 61 61 59 59 59 28 35 59 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 59 59 59 59 59 59 59 59 59 45 61 61 61 61 61 61 59 59 59 59 59 59 55 61 59 61 61 61 59 59 59 59 59 52 61 61 59 59 59 59 52 52 61 61 61 61 61 61 61 59 61 59 59 59 61 59 59 59 59 59 43 61 61 61 61 59 59 61 61 61 61 61 59 61 61 61 61 55 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 59 59 59 59 52 61 61 61 61 59 59 61 61 61 61 61 61 59 61 59 61 61 61 61 59 59 59 59 61 59 59 52 59 59 52 59 59 59 61 59 61 61 59 61 61 61 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 52 59 52 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 55 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 47 61 47 36 55 47 38 61 55 61 55 55 61 50 61 61 52 61 61 61 61 61 61 61 61 50 61 61 53 61 61 61 61 50 61 53 61 61 61 53 53 50 61 61 50 61 61 61 61 61 50 50 38 29 50 40 40 61 61 61 61 39 50 61 61 52 42 42 47 43 61 61 53 47 61 61 45 61 61 52 61 42 61 61 52 42 47 61 45 61 61 61 61 57 53 53 53 47 53 53 57 57 57 39 41 47 31 42 53 43 57 53 53 47 57 45 57 53 53 38 53 35 39 30 57 50 38 53 52 46 47 47 47 45 35 33 42 20 32 38 47 27 57 34 53 17 16 8 17 12 23 57 40 41 20 57 46 38 34 28 57 31 45 32 57 42 50 50 33 53 38 40 39 38 38 34 36 30 53 17 57 31 40 45 30 32 14 19 7 16 25 52 42 52 50 32 23 32 36 53 40 52 42 45 43 50 24 28 22 8 18 17 53 36 40 12 38 26 12 53 53 57 57 53 40 31 42 39 41 33 29 42 42 11 50 29 20 25 24 30 11 37 38 25 30 37 57 39 37 31 19 40 25 33 10 41 48 31 29 27 37 41 32 36 36 52 57 30 21 33 29 31 33 23 37 26 10 9 15 17 21 15 33 33 15 40 15 27 18 14 25 31 14 31 44 5 19 30 40 53 25 37 31 41 31 41 30 41 29 15 30 27 13 21 19 10 18 18 12 30 24 28 31 30 8 15 31 17 18 30 32 19 16 17 10 12 16 25 23 9 29 38 29 34 23 20 23 19 6 27 28 11 13 11 14 13 10 5 7 10 18 21 18 13 22 20 12 16 18 16 16 16 12 10 18 32 35 15 25 21 19 13 29 14 51 43 17 12 8 16 14 12 22 12 12 14 28 29 29 19 14 7 7 26 9 16 33 28 23 19 29 13 10 8 15 6 5 5 7 12 28 16 18 24 12 19 10	Open. Hide. 55 47 52 49 55 52 43 43 33 26 28 32 28 32 35 55 59 59 59 61 61 61 59 59 61 61 59 59 59 59 61 59 59 59 59 59 61 59 59 59 61 59 61 61 61 61 55 59 59 59 61 49 59 59 41 32 59 59 44 55 61 61 61 59 59 59 61 61 61 59 59 61 61 61 59 61 61 61 61 61 61 59 52 55 59 61 61 61 61 59 61 59 61 61 59 59 59 59 59 43 61 61 61 61 52 59 59 61 61 50 59 61 59 59 59 61 61 61 59 59 59 49 45 61 59 61 59 61 59 52 59 59 38 61 59 59 59 59 61 61 59 61 61 59 61 59 59 61 61 59 59 61 59 61 61 61 59 61 59 59 59 59 59 59 59 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 61 61 59 61 59 59 61 59 59 59 59 59 59 59 61 59 59 61 59 59 61 61 61 61 59 59 59 59 59 59 59 59 59 61 61 61 61 61 59 59 59 55 59 52 59 59 61 59 61 61 61 52 61 61 61 61 61 61 61 59 59 59 59 59 59 49 59 59 59 59 49 59 52 52 59 59 44 59 61 59 59 61 59 59 59 61 59 59 59 59 59 59 59 59 59 59 59 61 61 61 59 61 59 59 55 59 59 59 59 52 52 52 52 36 59 49 52 61 52 52 59 45 59 52 43 59 59 52 59 59 59 59 59 52 59 61 59 59 59 52 59 61 59 59 59 59 59 59 61 59 59 59 61 59 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 59 61 61 61 59 61 61 59 59 61 61 59 59 59 61 61 59 59 61 59 61 61 59 61 59 59 45 59 61 61 61 61 61 59 59 59 59 59 59 52 52 61 52 59 61 61 59 61 61 61 61 59 59 59 59 61 61 61 61 61 61 61 61 61 49 59 59 52 59 59 61 61 61 59 61 61 61 61 61 59 61 59 59 61 59 52 52 59 52 49 49 36 61 55 19 26 12 15 18 23 55 52 49 43 34 34 52 61 61 61 61 61 61 61 61 61 61 61 55 55 47 61 52 61 61 55 61 55 61 61 55 55 55 61 55 61 61 61 61 55 55 61 61 61 61 61 61 55 55 50 55 55 55 55 55 61 50 50 55 55 50 61 32 43 50 50 50 20 14 11 7 14 12 50 37 49 50 49 50 61 61 47 55 55 55 55 55 55 50 37 47 45 61 47 61 45 61 61 42 27 33 21 24 35 47 23 37 32 50 53 43 37 36 61 43 53 47 33 43 50 50 33 24 53 50 61 61 61 61 30 53 61 61 53 61 50 53 61 37 50 50 47 23 32 43 31 38 39 42 39 28 38 42 31 43 43 38 47 53 42 53 47 47 42 25 35 50 47 39 39 38 47 27 31 47 47 33 42 61 53 33 53 50 50 52 53 53 47 53 53 53 57 50 47 33 38 39 31 39 53 52 39 27 53 31 14 53 22 40 40 32 30 13 34 18 53 50 52 53 45 47 37 27 30 24 26 24 53 40 53 57 38 53 52 32 47 25 7 53 50 12 17 6 8 8 10 50 15 45 39 16 52 52 25 42 42 34 22 7 25 32 30 34 27 52 28 47 30 36 40 29 16 16 38 45 53 29 19 34 5 29 28 41 42 50 32 19 41 12 50 30 30 50 31 57 57 33 17 32 42 38 57 33 28 25 32 40 27 16 33 40 40 33 18 37 26 16 11 32 18 36 28 38 25 30 28 37 33 36 38 20 52 27 14 42 22 27 38 28 24 11 33 50 30 35 26 24 23 14 8 26 10 37 26 23 6 27 10 26 9 33 16 37 31 37 37 36 20 37 8 22 21 37 12 37 30 39 40 25 25 25 31 28 38 14 24 16 14 31 19 33 37 22 26 14 30 12 14 32 32 19 29 7 12 22 8 10 7 6 10 20 12 13 10 8 30 8 15 9 14 31 20 14 8 18 8 9 12 21 10 12 5 4 5 6 27 20 39 44 32 10 30 18 21 18 22 30 11 12 21 6 24 28 24 5 29 8 26 6 30 26 20 20 16 22 11 9 15 37 24 21 25 16 14 22 31 9 27 29 26 14 29 15 12 21 14 14 12 5 10 10 12 7 16 12 14 28 7 29 20 29 14 26 11 9 21 13 17 13 21 30 11 7 20 10 9 16 14 17 10 13 22 25 12 4 10 6 29 11 7 6 9 6 10 6 15 5 7 11 14 9 30 21 27 10 14 23 31 16 29 28 14 23 15 30 12 16 12 18 9 8 20 17 7 5 20 13 10 5 7 10 29 22 36 7 26 14 13 18 26 25 13 8 8 8 15 7 14 19 9 17 16 5 13 6 9 8 6 14 17 10 23 20 11 5 11 5 5 25 5 6 5 9 6 10

Alignment Information

BAC End 1

BAC End 2

seq1: chr4_60448159_60449128
seq2: B6Ng01-030E02.b_42_1011 (reverse)

seq1  GTTGCTTTCTGCTGTAGAAGCAACTTCTAGTTCATTACTAGAAAAACAAT  50
      ||||||||  || ||||||||||||||||||||  |||| ||||| ||||
seq2  GTTGCTTT-AGCCGTAGAAGCAACTTCTAGTTCCATACTGGAAAACCAAT  49

seq1  AGTTCATAGCCAGATGAGGTGCTA-CAACCCATAATCCC-AGAGATCAGG  98
      ||||||||||||||||||| |||| || ||||||||||| ||||||||||
seq2  AGTTCATAGCCAGATGAGG-GCTACCACCCCATAATCCCAAGAGATCAGG  98

seq1  AGGGTGGAGCAGGAGGATAGCCAGAGATAGAAGACCATTCAAATCTCAGT  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTGGAGCAGGAGGATAGCCAGAGATAGAAGACCATTCAAATCTCAGT  148

seq1  GTAAGCTCAAGCCCACCTCAGCTCACATTAGAAAGCTGGTCATGTCTGCT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGCTCAAGCCCACCTCAGCTCACATTAGAAAGCTGGTCATGTCTGCT  198

seq1  TTTAACCCCAACACTAGGTAGATGGCAGAGACTGGAGCATTGCTGAGACC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACCCCAACACTAGGTAGATGGCAGAGACTGGAGCATTGCTGAGACC  248

seq1  TAGTGGATAGGCAGCCTATCTGAAACACACTAATTCTCAGATTCAGAGGG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGGATAGGCAGCCTATCTGAAACACACTAATTCTCAGATTCAGAGGG  298

seq1  AGACCCTGTCTCAAGGGGATGAAGTAAAAAGAGATAGAGGGATATATTGG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCCTGTCTCAAGGGGATGAAGTAAAAAGAGATAGAGGGATATATTGG  348

seq1  TTTCCTGTTCTGACTTCTGCATATACTAGGAAAGGCATAAGCATGTGAAC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTGTTCTGACTTCTGCATATACTAGGAAAGGCATAAGCATGTGAAC  398

seq1  AGGTAGGCAGACACCATAATCAACAACAACAACAAAAAACAATGAGGGAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAGGCAGACACCATAATCAACAACAACAACAAAAAACAATGAGGGAA  448

seq1  AGAAGAGAAGAAGGAGGAAAATGGTAAGGAAAAGAAGGAGGAGGAGGAGA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAGAAGAAGGAGGAAAATGGTAAGGAAAAGAAGGAGGAGGAGGAGA  498

seq1  AGGAGGAGAAGTAAGAGGAGGGAAGATCGTGATATTCCCCTAGTATCCAC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGAGAAGTAAGAGGAGGGAAGATCGTGATATTCCCCTAGTATCCAC  548

seq1  CAAACACTTGTAGACCAAGAGAGAGACAGTTGTCATGCCTCATTCAGTCT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACACTTGTAGACCAAGAGAGAGACAGTTGTCATGCCTCATTCAGTCT  598

seq1  TGAACCACACCAACTCCTCCATATTTTAAAGAAACCCATGTGCAGTTTCT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCACACCAACTCCTCCATATTTTAAAGAAACCCATGTGCAGTTTCT  648

seq1  TTGCTACTACCGGCCAGTCCAAAATGTCTGAAGCTGTACAGCAGTGTTTA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTACTACCGGCCAGTCCAAAATGTCTGAAGCTGTACAGCAGTGTTTA  698

seq1  TTCTTCTTTCTCCTATTAATCATCCTCCTTTCATGGTAAAAAACATCCAG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCTTTCTCCTATTAATCATCCTCCTTTCATGGTAAAAAACATCCAG  748

seq1  ACCTGTATAGTGGCATCAATAAGAACAAAGGCTCCTGAGTTAGAGAGTCT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTATAGTGGCATCAATAAGAACAAAGGCTCCTGAGTTAGAGAGTCT  798

seq1  TGGGTTTAAATCTAAGTTCTCACATTGACTGACTATATAACCTTATACAG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTTAAATCTAAGTTCTCACATTGACTGACTATATAACCTTATACAG  848

seq1  TTACTTAATCTTTCTGAGTCTTAACTAATACTATGGTAAGAAAAATAAAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTAATCTTTCTGAGTCTTAACTAATACTATGGTAAGAAAAATAAAA  898

seq1  TAGTACATACCATATAAAGCTGATGTAAAGTTGAAATGAAGTGTATCTAG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTACATACCATATAAAGCTGATGTAAAGTTGAAATGAAGTGTATCTAG  948

seq1  TACTTGCCTCCTTCTTGAATTC  970
      ||||||||||||||||||||||
seq2  TACTTGCCTCCTTCTTGAATTC  970

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information