BAC Information

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BAC

Clone NameB6Ng01-030K19
Chromosome4 (Build37)
Map Location 136,507,595 - 136,631,692
singlet/doubletdoublet
Overlap geneEpha8, Zbtb40
Upstream geneHmgcl, Gale, Lypla2, 1110049F12Rik, LOC669445, Tceb3, Rpl11, Id3, E2f2, Ddefl1, Tcea3, Zfp46, Hnrpr, Htr1d, LOC100042540, Luzp1, Aof2, LOC667080, LOC433770, 4930549C01Rik, BC029684, Ephb2, C1qb, C1qc, C1qa
Downstream geneWnt4, Cdc42, LOC665533, LOC242711, Ela3, 1700013G24Rik, Hspg2, Ldlrad2, Usp48, Rap1gap, Akp2, Ece1, LOC100040558, Eif4g3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-030K19.bB6Ng01-030K19.g
ACCDH860506DH860507
length673517
definitionDH860506|Mus musculus domesticus DNA, BAC clone: B6Ng01-030K19, 5' end.DH860507|Mus musculus domesticus DNA, BAC clone: B6Ng01-030K19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(136,631,018 - 136,631,692)(136,507,595 - 136,508,117)
sequence
gaattctatatgttgtgtgaaccaaagcttgctcttcccttgcagccgtt
gtcccgtgatagcatcttctctgtaggcaccaacaggaggttgtctaggt
tctcccttttctgtggtctcatgagctgcttcagaagtccatcctctgcc
tttttacagatcccccaccccactcagccatctctctctctctctctctc
tctctctctctctctctctctctctctctcccgggccagattaggcctcc
ttgggtctctcctgggctagattagggtttactctgcctcactgggtcca
cctttcaactgccatactgctgctagggtcatgatcttaactcctctcca
caccccactctgaaacacacttacacacacacacacacacacacacgcgc
gcacacacacacacactcacacacacacacacacacacacacacacacac
acagtgctctgtgtaccttgtacctccacctgtcattccctccactcttc
tgtactccctccccagtaccagtctgatggcttcagtcaccctcctgcat
gcccaccccacaggacagctcttccactctacctggcacacttcctggcc
agtggacctgggatagtgaggcatagagagagagagagagagagagacag
aaaaatatagagagagagagaag
acttctcggagcctttgcttccttttgatcagtgtgatgctaagattcgc
aactccaaccacacaactccatcactcaccccatgagcgggatacgtgag
ccagccccagtctccgtggatggttgatgtatccaacaagttcactgtaa
aacacaagacaagggggcattaggaccctgggaccctttcccagtcagag
ccagctgcattggtcactcttagctgtcccttcccaggagctcacagttc
ccagcccaggacgcctgtctttgctagcctatctggtttgaagtctaagc
cccacctctttcttgacagtgcccatcaaccctcagccaacatccgggtc
accgtgccactactaatgcacatactgcccgggtcctgggatgctggacc
agctggacgtacagagctgggtctgggtgctcctgcaggcataggctggc
atcctggttctgcctcttcacctctctaagtcccagcttcctcctctatg
gaatgggggtggtagtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_136631018_136631692
seq2: B6Ng01-030K19.b_44_716 (reverse)

seq1  CTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  50
      ||||||||||||||| | | | ||| ||||||||||||||||||||||| 
seq2  CTTCTCTCTCTCTCTATATTTTTCTGTCTCTCTCTCTCTCTCTCTCTCTA  50

seq1  TGCCATCACTCTCCCAGGTCCACTGGCCAGGAAGTGTGCCAGGTAGAGTG  100
      |||| ||||| |||||||||||||||||||||||||||||||||||||| 
seq2  TGCC-TCACTATCCCAGGTCCACTGGCCAGGAAGTGTGCCAGGTAGAGT-  98

seq1  GGAAGAGCTGTCCTGTGGGGTGGGCCTGCAGGAGGGTGACTGCTGCCATC  150
      ||||||||||||||||||||||||| ||||||||||||||||  ||||||
seq2  GGAAGAGCTGTCCTGTGGGGTGGGCATGCAGGAGGGTGACTGAAGCCATC  148

seq1  AGGCTGGTACTGGGGAGGGAGTAAAGAAGAGTGGAGGGAATGACAGGTGG  200
      || |||||||||||||||||||| ||||||||||||||||||||||||||
seq2  AGACTGGTACTGGGGAGGGAGTACAGAAGAGTGGAGGGAATGACAGGTGG  198

seq1  AGGTACAAGGTCCACAGAGCACTGTGTGTGTGTGTGTGTGTGTGTGTGTG  250
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  AGGTACAAGGTACACAGAGCACTGTGTGTGTGTGTGTGTGTGTGTGTGTG  248

seq1  TGTGTGTGTGTGTGTGTGTGTGTGCGCGCGTGTGTGTGTGTGTGTGTGTG  300
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGAGTGTGTGTGTGTGTGCGCGCGTGTGTGTGTGTGTGTGTGTG  298

seq1  TGTAAGTGTGTTTCAGAGTGGGGTGTGGAGAGGAGTTAAGATCATGACCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAGTGTGTTTCAGAGTGGGGTGTGGAGAGGAGTTAAGATCATGACCC  348

seq1  TAGCAGCAGTATGGCAGTTGAAAGGTGGACCCAGTGAGGCAGAGTAAACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGCAGTATGGCAGTTGAAAGGTGGACCCAGTGAGGCAGAGTAAACC  398

seq1  CTAATCTAGCCCAGGAGAGACCCAAGGAGGCCTAATCTGGCCCTGGAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CTAATCTAGCCCAGGAGAGACCCAAGGAGGCCTAATCTGGCCCGGGAGAG  448

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATGGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATGGCT  498

seq1  GAGTGGGGTGGGGGATCTGTAAAAAGGCAGAGGATGGACTTCTGAAGCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGGGGTGGGGGATCTGTAAAAAGGCAGAGGATGGACTTCTGAAGCAG  548

seq1  CTCATGAGACCACAGAAAAGGGAGAACCTAGACAACCTCCTGTTGGTGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGAGACCACAGAAAAGGGAGAACCTAGACAACCTCCTGTTGGTGCC  598

seq1  TACAGAGAAGATGCTATCACGGGACAACGGCTGCAAGGGAAGAGCAAGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAGAAGATGCTATCACGGGACAACGGCTGCAAGGGAAGAGCAAGCT  648

seq1  TTGGTTCACACAACATATAGAATTC  675
      |||||||||||||||||||||||||
seq2  TTGGTTCACACAACATATAGAATTC  673

seq1: chr4_136507595_136508117
seq2: B6Ng01-030K19.g_67_589

seq1  GAATTCACTTCTCGGAGCCTTTGCTTCCTTTTGATCAGTGTGATGCTAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTCTCGGAGCCTTTGCTTCCTTTTGATCAGTGTGATGCTAAG  50

seq1  ATTCGCAACTCCAACCACACAACTCCATCACTCACCCCATGAGCGGGATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCGCAACTCCAACCACACAACTCCATCACTCACCCCATGAGCGGGATA  100

seq1  CGTGAGCCAGCCCCAGTCTCCGTGGATGGTTGATGTATCCAACAAGTTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGAGCCAGCCCCAGTCTCCGTGGATGGTTGATGTATCCAACAAGTTCA  150

seq1  CTGTAAAACACAAGACAAGGGGGCATTAGGACCCTGGGACCCTTTCCCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAAAACACAAGACAAGGGGGCATTAGGACCCTGGGACCCTTTCCCAG  200

seq1  TCAGAGCCAGCTGCATTGGTCACTCTTAGCTGTCCCTTCCCAGGAGCTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGCCAGCTGCATTGGTCACTCTTAGCTGTCCCTTCCCAGGAGCTCA  250

seq1  CAGTTCCCAGCCCAGGACGCCTGTCTTTGCTAGCCTATCTGGTTTGAAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCCCAGCCCAGGACGCCTGTCTTTGCTAGCCTATCTGGTTTGAAGT  300

seq1  CTAAGCCCCACCTCTTTCTTGACAGTGCCCATCAACCCTCAGCCAACATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGCCCCACCTCTTTCTTGACAGTGCCCATCAACCCTCAGCCAACATC  350

seq1  CGGGTCACCGTGCCACTACTAATGCACATACTGCCCGGGTCCTGGGATGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGTCACCGTGCCACTACTAATGCACATACTGCCCGGGTCCTGGGATGC  400

seq1  TGGACCAGCTGGACGTACAGAGCTGGGTCTGGGTGCTCCTGCAGGCATAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACCAGCTGGACGTACAGAGCTGGGTCTGGGTGCTCCTGCAGGCATAG  450

seq1  GCTGGCATCCTGGTTCTGCCTCTTCACCTCTCTAAGTCCCAGCTTCCTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGCATCCTGGTTCTGCCTCTTCACCTCTCTAAGTCCCAGCTTCCTCC  500

seq1  TCTATGGAATGGGGGTGGTAGTG  523
      |||||||||||||||||||||||
seq2  TCTATGGAATGGGGGTGGTAGTG  523