BAC Information

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BAC

Clone NameB6Ng01-031F03
Chromosome4 (Build37)
Map Location 54,484,156 - 54,485,277
singlet/doubletsinglet
Overlap genenone
Upstream geneSlc44a1, Fsd1l, LOC666483, Fcmd, Tal2, LOC435784, Tmem38b, LOC670124, LOC100041280
Downstream geneLOC666901, LOC100041303, LOC384018, EG666920, Zfp462, LOC670211, Rad23b, LOC666953, LOC100041348
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-031F03.bB6Ng01-031F03.g
ACCDH860975DH860976
length1,1121,139
definitionDH860975|Mus musculus domesticus DNA, BAC clone: B6Ng01-031F03, 5' end.DH860976|Mus musculus domesticus DNA, BAC clone: B6Ng01-031F03, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcacttctgaaccaggggctgatgaaagtgtctgggctcctcac
agcctgaggccttcacttatgtgagaagccttgtggtggtgagagggaag
agtgggagctgagtggtttgcagatgttcagcagagctctgctgctccac
agctgtatgccctagcatcttctttcactttctcacagaatgtaagatgg
gcaagcagtatgctttccacaaggttggtgtgaagtcacaattcctccat
tttccggtgataccactggtttgtcagagatgctgtccaccatggtccta
aattgttatcgtagactttcaggtatttctttggcttctgctctcccctt
atctccaagctaagctcactgctgaatccagatggaaattcaggtatttc
taagtcttgaggtcaatatgtcaaatcctaataaggagatacaggttctc
tctgtggaacttctccatgttctgcttctagctacagtccaaagagcttg
caaccaccaagccctcactcccctagaagacagaaaaagaagaaaagcca
cacattcattctcttcaaagacttaccgggaaatgaccagcatcacgttg
tagtgacctgaacttaattctatgactatattctttcccaaggtggccat
gactgtgctaaatatacttaccatagaagaaagaggtggacatttggggc
agttggcattctcttccagagggctcacaggaattgttccagaaatgcaa
gtggaaaagaatggtgttggctctgaaggatagaagtaaggaaattacaa
tacagttgattataaaatctgtctatgtctgcttgaattattgaagatgt
ggctatgtggctcactttgttaatgtgctaatatcagaaacagaagcaat
aggctggctctctaatggcctagtaaaattgacttctatctacaaccaca
gtcaggttacgcataccccttatgctttttctctgtcttctaatgaattc
cccttggcctcacaaaaagataacaattatgatatgaatggaatgctcct
gagagtgaactgcagacaagaaggccttagtcaaggtgccttgcataaga
ttttatgaacaa
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattattggtg
ggattgcaggcttgtacaaccactctggaaatccgtctggcggttcctca
gaaaattggacatagtactaccagaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gtccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggttacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccttggaaaggagttacagagacaaagtttggagctgagatg
aaaggatggaccatgtagagactgccatatccagggatccaccccataat
cagcatccaaacgctgacaccattgcatacactagcaagatttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acacaagtggatgctcacagtcagctatggatggatcacagggctcccaa
tggaggagctagagaaagtacccaggagctaagggatctgcaaccctata
gtggatcacatatgactaccagtacccggagctctctgactctagctgat
ttgtactaagatggcctagtcggcctcactggaaagagcccatggaacac
aactttaatgccgaacggacgccaggccaaatgaatgcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_54484156_54485277
seq2: B6Ng01-031F03.b_44_1155

seq1  GAATTCTCACTTCTGAACCAGGGGCTGATGAAAGTGTCTGGGCTCCTCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACTTCTGAACCAGGGGCTGATGAAAGTGTCTGGGCTCCTCAC  50

seq1  AGCCTGAGGCCTTCACTTATGTGAGAAGCCTTGTGGTGGTGAGAGGGAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGAGGCCTTCACTTATGTGAGAAGCCTTGTGGTGGTGAGAGGGAAG  100

seq1  AGTGGGAGCTGAGTGGTTTGCAGATGTTCAGCAGAGCTCTGCTGCTCCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGAGCTGAGTGGTTTGCAGATGTTCAGCAGAGCTCTGCTGCTCCAC  150

seq1  AGCTGTATGCCCTAGCATCTTCTTTCACTTTCTCACAGAATGTAAGATGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTATGCCCTAGCATCTTCTTTCACTTTCTCACAGAATGTAAGATGG  200

seq1  GCAAGCAGTATGCTTTCCACAAGGTTGGTGTGAAGTCACAATTCCTCCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGCAGTATGCTTTCCACAAGGTTGGTGTGAAGTCACAATTCCTCCAT  250

seq1  TTTCCGGTGATACCACTGGTTTGTCAGAGATGCTGTCCACCATGGTCCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCGGTGATACCACTGGTTTGTCAGAGATGCTGTCCACCATGGTCCTA  300

seq1  AATTGTTATCGTAGACTTTCAGGTATTTCTTTGGCTTCTGCTCTCCCCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTTATCGTAGACTTTCAGGTATTTCTTTGGCTTCTGCTCTCCCCTT  350

seq1  ATCTCCAAGCTAAGCTCACTGCTGAATCCAGATGGAAATTCAGGTATTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCCAAGCTAAGCTCACTGCTGAATCCAGATGGAAATTCAGGTATTTC  400

seq1  TAAGTCTTGAGGTCAATATGTCAAATCCTAATAAGGAGATACAGGTTCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTCTTGAGGTCAATATGTCAAATCCTAATAAGGAGATACAGGTTCTC  450

seq1  TCTGTGGAACTTCTCCATGTTCTGCTTCTAGCTACAGTCCAAAGAGCTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGGAACTTCTCCATGTTCTGCTTCTAGCTACAGTCCAAAGAGCTTG  500

seq1  CAACCACCAAGCCCTCACTCCCCTAGAAGACAGAAAAAGAAGAAAAGCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCACCAAGCCCTCACTCCCCTAGAAGACAGAAAAAGAAGAAAAGCCA  550

seq1  CACATTCATTCTCTTCAAAGACTTACCGGGAAATGACCAGCATCACGTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTCATTCTCTTCAAAGACTTACCGGGAAATGACCAGCATCACGTTG  600

seq1  TAGTGACCTGAACTTAATTCTATGACTATATTCTTTCCCAAGGTGGCCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGACCTGAACTTAATTCTATGACTATATTCTTTCCCAAGGTGGCCAT  650

seq1  GACTGTGCTAAATATACTTACCATAGAAGAAAGAGGTGGACATTTGGGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGTGCTAAATATACTTACCATAGAAGAAAGAGGTGGACATTTGGGGC  700

seq1  AGTTGGCATTCTCTTCCAGAGGGCTCACAGGAATTGTTCCAGAAATGCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGGCATTCTCTTCCAGAGGGCTCACAGGAATTGTTCCAGAAATGCAA  750

seq1  GTGGAAAAGAATGGTGTTGGCTCTGAAGGATAGAAGTAAGGAAATTACAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAAAAGAATGGTGTTGGCTCTGAAGGATAGAAGTAAGGAAATTACAA  800

seq1  TACAGTTGATTATAAAATCTGTCTATGTCTGCTTGAATTATTGAAGATGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTTGATTATAAAATCTGTCTATGTCTGCTTGAATTATTGAAGATGT  850

seq1  GGCTATGTGGCTCACTTTGTTAATGTGCTAATATCAGAAACAGAAGCAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTATGTGGCTCACTTTGTTAATGTGCTAATATCAGAAACAGAAGCAAT  900

seq1  AGGCCTGGCTCTCTAATGGCCTAGTAAAATTGACTTCTATCTACAACCAC  950
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGG-CTGGCTCTCTAATGGCCTAGTAAAATTGACTTCTATCTACAACCAC  949

seq1  AGTCAGGTTACGCATACCCCTTATGCTTTTTCCTCTGTCCTTCTAATGAA  1000
      ||||||||||||||||||||||||||||||| |||||| |||||||||||
seq2  AGTCAGGTTACGCATACCCCTTATGCTTTTT-CTCTGT-CTTCTAATGAA  997

seq1  TTCCCCTTGGCCTCACAAATAGATAACAATTATTGAATTAATGAATGAGA  1050
      ||||||||||||||||||| |||||||||||| |||    |||||||  |
seq2  TTCCCCTTGGCCTCACAAAAAGATAACAATTA-TGA---TATGAATGGAA  1043

seq1  TGCT-CTGAGAGTGAACTGCAGGACAAGGAAGGCCTTAGTCAAGGTGCCA  1099
      |||| |||||||||||||||| ||||| ||||||||||||||||||||| 
seq2  TGCTCCTGAGAGTGAACTGCA-GACAA-GAAGGCCTTAGTCAAGGTGCCT  1091

seq1  TGCATAAGTATTTTCATGAACAA  1122
      |||||||| ||||| ||||||||
seq2  TGCATAAG-ATTTT-ATGAACAA  1112