BAC Information

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BAC

Clone NameB6Ng01-031F05
Chromosome4 (Build37)
Map Location 137,860,358 - 138,020,788
singlet/doubletdoublet
Overlap geneDdost, Pink1, Cda, LOC625638, LOC625646, 0610009K11Rik, Camk2n1
Upstream geneCdc42, LOC665533, LOC242711, Ela3, 1700013G24Rik, Hspg2, Ldlrad2, Usp48, Rap1gap, Akp2, Ece1, LOC100040558, Eif4g3, Hp1bp3, Kif17
Downstream geneLOC100040618, 4931403E03Rik, Ubxd3, Pla2g2c, Pla2g2f, Pla2g2d, Pla2g5, Pla2g2a, Pla2g2e, Otud3, Rnf186, Tmco4, Htr6, LOC665683, Nbl1, 2310028O11Rik, Hspe1-ps4, 9530077C14Rik, Capzb, Pqlc2, LOC100042808, Akr7a5, LOC625977, LOC626000, Mrto4, C230096C10Rik, Zubr1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-031F05.bB6Ng01-031F05.g
ACCDH860979DH860980
length1,066898
definitionDH860979|Mus musculus domesticus DNA, BAC clone: B6Ng01-031F05, 5' end.DH860980|Mus musculus domesticus DNA, BAC clone: B6Ng01-031F05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(138,019,712 - 138,020,788)(137,860,358 - 137,861,261)
sequence
gaattcttgtggccttggctgccaggaaagcacagtcccgggtgccactc
cccgcactgagggagggaagctccccggaactaccctggccaggcaacct
gcttgcctggcccacatctccgcccagccgtccccatggcaaccggttgg
cctggtccagggttcaccgcctagtagagccttggccttccctcccccac
cccacccccaaacccgcttgaggatgaacacttcacaatctatccctgag
ctccgggggctgggagcctcgcgtgtagataaataaacaaataataaaaa
gctagttgtgagaccccctccgtgcactggggttgcggggaccatgcgca
taagggaccaaacttagctggatttcagtcccagtgggaatgtaggcagg
tgcctttgctgctccgcgcctcattgttctgtatctgtagaatggggttg
taaacaataactacctaggagaattgctgaaaagatttagacatttaaat
ggggacaggacagagcaaccactggtctacaactagaaatgaggggaaag
attttattttattttattttttacatagagaaacgagtcccagagagaca
aaatatacttgctagggatggtggtcacacagccagccctggccgaaagg
aaggaaatcatgatctctttgtgaaactcaaaagctgggcgctggcagcg
atctccctgggactcccctagaggttgcctgcacttcccctgggcccacc
cccaccctcttgaaattcagtcattgaaaggtcacagaccagacactgtg
gtttctggaccggaaagggcctccctctagcaagcactgtctccccagtg
ccaagcacaagccccgcccctctctgcctgccagaaaaaaaaattgttga
tgaatatggacttaattaatgatttcactgagtcatctcctcataaaaca
ccctcccatggttaactctgaaacctttggccacccagctgcgttccaca
ggcatttctttccttgctgttccggttgtcgcggctgcttctccccccct
catcgactgccaaccc
gaattcacccctatctggtcctggtaatgacaactgcgtcctgggggaaa
aggggcggctgcctaggaaacggaaaatctggagacgctagaggagagtt
tgagagatgtggcgggagctagcctgggcggaggcaaagggcgcccggct
ttgttgattggcagcagctacggagctgtctctcttggattggccctttt
ccatgggggaggcggagcctcaagtgcgtttcgccaataaggtacagaga
ctcggcctccggagggccacttccggtggcgttccctgcttcttggtccg
tccccgcagcggcgtgggccgcggggccacggagtacccggaccgcttcc
aagtggtactccgccgctgcgagcggccattgggcggccgcgagggacgc
ttccggtgcccaggtgctggcctgggctgctgggagatgaagatggatcc
ccgcctcgccgtccgcgcctggcccctctgcgggctgctgctggccgtgc
tcggctgcgtctgcgccagcggcccccgcaccctcgtgctgctggacaac
ctgaacgtgcgggacacgcactcgctgttcttccgcagcctgaagggtga
gcgccgagcagagccgagggaatggcccgggttggggcggagacggcagc
cccctccgagggctgcagcagggattcctctcctgaccgggttccgggtt
tctttcctccagaccggggctttgagctcaccttcaagaccgcagatgac
cccagcttgtccctcattaagttactggagttcctctatgacaaccttat
catcttttcccgtcggtggaaagtaaggcgcgcgtcgcccctcgaatgga
ttgggggggctcaggagacgctgtctcttgttcctgggcatgttctgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_138019712_138020788
seq2: B6Ng01-031F05.b_43_1108 (reverse)

seq1  GGGTGGGCAGTCGATGAGGGGGGAGAAAGCAGACCGCGACAACCCGGATA  50
      |||| ||||||||||||||||||   |||||| ||||||||| ||||| |
seq2  GGGTTGGCAGTCGATGAGGGGGGGAGAAGCAG-CCGCGACAA-CCGGA-A  47

seq1  CAGCTAGGGAAAGAAATGCCCTGTGGGACGCAGCTGGGTGGCCAAGGGTT  100
      |||| | ||||||||||| ||||||| |||||||||||||||||| ||||
seq2  CAGC-AAGGAAAGAAATG-CCTGTGGAACGCAGCTGGGTGGCCAAAGGTT  95

seq1  TCAGGAGTTTACCCTGGGAGGGTGTTTTATGAAGGAGATGAACTCAGTGA  150
      ||| ||||| ||| ||||||||||||||||| |||||||| |||||||||
seq2  TCA-GAGTTAACCATGGGAGGGTGTTTTATG-AGGAGATG-ACTCAGTGA  142

seq1  ATTCATTAATTAAGTCCATATTCATTCAACAATTTTTTTTTTCTGGCAGG  200
      | |||||||||||||||||||||| ||||||| |||||||||||||||||
seq2  AATCATTAATTAAGTCCATATTCA-TCAACAA-TTTTTTTTTCTGGCAGG  190

seq1  CAGAGAGGGGGCGGGGCTTGTGCTTGGCACTGGGGAGACAGTGCTTGCTA  250
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGA-GGGGCGGGGCTTGTGCTTGGCACTGGGGAGACAGTGCTTGCTA  239

seq1  GAGGGAGGCCCTTTCCGGTCCAGAAACCACAGTGTCTGGTCTGTGACCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGAGGCCCTTTCCGGTCCAGAAACCACAGTGTCTGGTCTGTGACCTT  289

seq1  TCAATGACTGAATTTCAAGAGGGTGGGGGTGGGCCCAGGGGAAGTGCAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGACTGAATTTCAAGAGGGTGGGGGTGGGCCCAGGGGAAGTGCAGG  339

seq1  CAACCTCTAGGGGAGTCCCAGGGAGATCGCTGCCAGCGCCCAGCTTTTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCTCTAGGGGAGTCCCAGGGAGATCGCTGCCAGCGCCCAGCTTTTGA  389

seq1  GTTTCACAAAGAGATCATGATTTCCTTCCTTTCGGCCAGGGCTGGCTGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCACAAAGAGATCATGATTTCCTTCCTTTCGGCCAGGGCTGGCTGTG  439

seq1  TGACCACCATCCCTAGCAAGTATATTTTGTCTCTCTGGGACTCGTTTCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCACCATCCCTAGCAAGTATATTTTGTCTCTCTGGGACTCGTTTCTC  489

seq1  TATGTAAAAAATAAAATAAAATAAAATCTTTCCCCTCATTTCTAGTTGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTAAAAAATAAAATAAAATAAAATCTTTCCCCTCATTTCTAGTTGTA  539

seq1  GACCAGTGGTTGCTCTGTCCTGTCCCCATTTAAATGTCTAAATCTTTTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAGTGGTTGCTCTGTCCTGTCCCCATTTAAATGTCTAAATCTTTTCA  589

seq1  GCAATTCTCCTAGGTAGTTATTGTTTACAACCCCATTCTACAGATACAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATTCTCCTAGGTAGTTATTGTTTACAACCCCATTCTACAGATACAGA  639

seq1  ACAATGAGGCGCGGAGCAGCAAAGGCACCTGCCTACATTCCCACTGGGAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGAGGCGCGGAGCAGCAAAGGCACCTGCCTACATTCCCACTGGGAC  689

seq1  TGAAATCCAGCTAAGTTTGGTCCCTTATGCGCATGGTCCCCGCAACCCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATCCAGCTAAGTTTGGTCCCTTATGCGCATGGTCCCCGCAACCCCA  739

seq1  GTGCACGGAGGGGGTCTCACAACTAGCTTTTTATTATTTGTTTATTTATC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCACGGAGGGGGTCTCACAACTAGCTTTTTATTATTTGTTTATTTATC  789

seq1  TACACGCGAGGCTCCCAGCCCCCGGAGCTCAGGGATAGATTGTGAAGTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACGCGAGGCTCCCAGCCCCCGGAGCTCAGGGATAGATTGTGAAGTGT  839

seq1  TCATCCTCAAGCGGGTTTGGGGGTGGGGTGGGGGAGGGAAGGCCAAGGCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCCTCAAGCGGGTTTGGGGGTGGGGTGGGGGAGGGAAGGCCAAGGCT  889

seq1  CTACTAGGCGGTGAACCCTGGACCAGGCCAACCGGTTGCCATGGGGACGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTAGGCGGTGAACCCTGGACCAGGCCAACCGGTTGCCATGGGGACGG  939

seq1  CTGGGCGGAGATGTGGGCCAGGCAAGCAGGTTGCCTGGCCAGGGTAGTTC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCGGAGATGTGGGCCAGGCAAGCAGGTTGCCTGGCCAGGGTAGTTC  989

seq1  CGGGGAGCTTCCCTCCCTCAGTGCGGGGAGTGGCACCCGGGACTGTGCTT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGGAGCTTCCCTCCCTCAGTGCGGGGAGTGGCACCCGGGACTGTGCTT  1039

seq1  TCCTGGCAGCCAAGGCCACAAGAATTC  1077
      |||||||||||||||||||||||||||
seq2  TCCTGGCAGCCAAGGCCACAAGAATTC  1066

seq1: chr4_137860358_137861261
seq2: B6Ng01-031F05.g_68_965

seq1  GAATTCACCCCTATCTGGTCCTGGTAATGACAACTGCGTCCTGGGGGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCCCTATCTGGTCCTGGTAATGACAACTGCGTCCTGGGGGAAA  50

seq1  AGGGGCGGCTGCCTAGGAAACGGAAAATCTGGAGACGCTAGAGGAGAGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGCGGCTGCCTAGGAAACGGAAAATCTGGAGACGCTAGAGGAGAGTT  100

seq1  TGAGAGATGTGGCGGGAGCTAGCCTGGGCGGAGGCAAAGGGCGCCCGGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGATGTGGCGGGAGCTAGCCTGGGCGGAGGCAAAGGGCGCCCGGCT  150

seq1  TTGTTGATTGGCAGCAGCTACGGAGCTGTCTCTCTTGGATTGGCCCTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGATTGGCAGCAGCTACGGAGCTGTCTCTCTTGGATTGGCCCTTTT  200

seq1  CCATGGGGGAGGCGGAGCCTCAAGTGCGTTTCGCCAATAAGGTACAGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGGGGGAGGCGGAGCCTCAAGTGCGTTTCGCCAATAAGGTACAGAGA  250

seq1  CTCGGCCTCCGGAGGGCCACTTCCGGTGGCGTTCCCTGCTTCTTGGTCCG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGGCCTCCGGAGGGCCACTTCCGGTGGCGTTCCCTGCTTCTTGGTCCG  300

seq1  TCCCCGCAGCGGCGTGGGCCGCGGGGCCACGGAGTACCCGGACCGCTTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCGCAGCGGCGTGGGCCGCGGGGCCACGGAGTACCCGGACCGCTTCC  350

seq1  AAGTGGTACTCCGCCGCTGCGAGCGGCCATTGGGCGGCCGCGAGGGACGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGTACTCCGCCGCTGCGAGCGGCCATTGGGCGGCCGCGAGGGACGC  400

seq1  TTCCGGTGCCCAGGTGCTGGCCTGGGCTGCTGGGAGATGAAGATGGATCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCGGTGCCCAGGTGCTGGCCTGGGCTGCTGGGAGATGAAGATGGATCC  450

seq1  CCGCCTCGCCGTCCGCGCCTGGCCCCTCTGCGGGCTGCTGCTGGCCGTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCCTCGCCGTCCGCGCCTGGCCCCTCTGCGGGCTGCTGCTGGCCGTGC  500

seq1  TCGGCTGCGTCTGCGCCAGCGGCCCCCGCACCCTCGTGCTGCTGGACAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGCTGCGTCTGCGCCAGCGGCCCCCGCACCCTCGTGCTGCTGGACAAC  550

seq1  CTGAACGTGCGGGACACGCACTCGCTGTTCTTCCGCAGCCTGAAGGGTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAACGTGCGGGACACGCACTCGCTGTTCTTCCGCAGCCTGAAGGGTGA  600

seq1  GCGCCGAGCAGAGCCGAGGGAATGGCCCGGGTTGGGGCGGAGACGGCAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCCGAGCAGAGCCGAGGGAATGGCCCGGGTTGGGGCGGAGACGGCAGC  650

seq1  CCCCTCCGAGGGCTGCAGCAGGGATTCCTCTCCTGACCGGGTTCCGGGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTCCGAGGGCTGCAGCAGGGATTCCTCTCCTGACCGGGTTCCGGGTT  700

seq1  TCTTTCCTCCAGACCGGGGCTTTGAGCTCACCTTCAAGACCGCAGATGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCCTCCAGACCGGGGCTTTGAGCTCACCTTCAAGACCGCAGATGAC  750

seq1  CCCAGCTTGTCCCTCATTAAGTACGGGGAGTTCCTCTATGACAACCTTAT  800
      ||||||||||||||||||||||    ||||||||||||||||||||||||
seq2  CCCAGCTTGTCCCTCATTAAGTTACTGGAGTTCCTCTATGACAACCTTAT  800

seq1  CATCTTTTCCCCGTCGGTGGAAGGTAAGGGCGCGCGTCGCCCCTCGAAAT  850
      |||||||| ||||||||||||| |||| ||||||||||||||||||||  
seq2  CATCTTTT-CCCGTCGGTGGAAAGTAA-GGCGCGCGTCGCCCCTCGAA--  846

seq1  GGGATTGGGGGGGCTCAGGAGACGGCTGTCTTCTTGTTCCTGGGCATGTT  900
       |||||||||||||||||||||| |||||| |||||||||||||||||||
seq2  TGGATTGGGGGGGCTCAGGAGAC-GCTGTC-TCTTGTTCCTGGGCATGTT  894

seq1  CTGG  904
      ||||
seq2  CTGG  898