MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-031N02
Chromosome	4 (Build37)
Map Location	113,061,338 - 113,062,313
singlet/doublet	singlet
Overlap gene	LOC100040607
Upstream gene	A030013N09Rik, LOC665949, LOC630887, OTTMUSG00000008540, LOC100040581, A030001H23Rik, LOC433745, LOC545668, LOC230622
Downstream gene	LOC242627, LOC100040625, A630098G03Rik
Link	Open Mouse BAC browser

Click to get alignment info.

name	A030013N09Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:329918 MGI:3045341
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC665949 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665949
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	LOC630887 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:630887
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 Proteins pseudo : _no_value

name	OTTMUSG00000008540 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:329919 MGI:3649629
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040581 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040581
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	A030001H23Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:230613 MGI:2685416
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC433745 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:433745
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 40 mRNAs, 2754 ESTs, 17 Proteins

name	LOC545668 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:545668
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 49 ESTs, 4 Proteins pseudo : _no_value

name	LOC230622 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:230622
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 4 Proteins

name	LOC100040607 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040607
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein pseudo : _no_value

name	LOC242627 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:242627
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 3 Proteins

name	LOC100040625 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040625
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	A630098G03Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:230623 MGI:2685415
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	A030013N09Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31342817 GeneID:329918 MGI:3045341
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA A030013N09 gene transcript_id : NM_177864.2

name	OTTMUSG00000008540 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142378009 GeneID:329919 MGI:3649629
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, OTTMUSG00000008540 transcript_id : NM_177865.3

name	A030001H23Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126157500 GeneID:230613 MGI:2685416
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA A030001H23 gene transcript_id : NM_177668.2

name	LOC433745 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252851 GeneID:433745
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 1665 ESTs, 4 Proteins product : similar to ribosomal protein L3 transcript_id : XM_001475733.1

name	LOC230622 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252856 GeneID:230622
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 4 Proteins product : hypothetical LOC230622 transcript_id : XM_144000.8

name	LOC242627 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252859 GeneID:242627
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 3 Proteins product : hypothetical protein LOC242627 transcript_id : XM_144002.6

name	A630098G03Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802937 GeneID:230623 MGI:2685415
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA A630098G03 gene transcript_id : NM_177669.2

name	A030013N09Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29244462 GeneID:329918 MGI:3045341
definition	codon_start : 1 product : butyrophilin-like protein protein_id : NP_808532.1

name	OTTMUSG00000008540 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29244464 GeneID:329919 MGI:3649629
definition	codon_start : 1 note : novel protein containing an Immunoglobulin domain product : hypothetical protein LOC329919 protein_id : NP_808533.1

name	A030001H23Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46810291 GeneID:230613 MGI:2685416
definition	codon_start : 1 product : hypothetical protein LOC230613 protein_id : NP_808336.1

name	LOC433745 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149252852 GeneID:433745
definition	codon_start : 1 product : similar to ribosomal protein L3 protein_id : XP_001475783.1

name	LOC230622 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149252857 GeneID:230622
definition	codon_start : 1 product : hypothetical protein protein_id : XP_144000.8

name	LOC242627 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149252860 GeneID:242627
definition	codon_start : 1 product : hypothetical protein protein_id : XP_144002.6

name	A630098G03Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46849801 GeneID:230623 MGI:2685415
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC230623 protein_id : NP_808337.1

name	LOC665949 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665949
definition	number : 1 pseudo : _no_value

name	LOC630887 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:630887
definition	number : 1 pseudo : _no_value

name	LOC630887 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:630887
definition	number : 2 pseudo : _no_value

name	LOC630887 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:630887
definition	number : 3 pseudo : _no_value

name	LOC630887 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:630887
definition	number : 4 pseudo : _no_value

name	LOC630887 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:630887
definition	number : 5 pseudo : _no_value

name	LOC630887 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:630887
definition	number : 6 pseudo : _no_value

name	LOC630887 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:630887
definition	number : 7 pseudo : _no_value

name	LOC630887 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:630887
definition	number : 8 pseudo : _no_value

name	LOC630887 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:630887
definition	number : 9 pseudo : _no_value

name	LOC100040581 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040581
definition	number : 1 pseudo : _no_value

name	LOC100040581 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040581
definition	number : 2 pseudo : _no_value

name	LOC100040625 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040625
definition	number : 1 pseudo : _no_value

name	LOC545668 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149252855 GeneID:545668
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 49 ESTs, 4 Proteins product : similar to Minpp1 protein pseudo : _no_value transcript_id : XR_032007.1

name	LOC100040607 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149252858 GeneID:100040607
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein product : hypothetical protein LOC100040607 pseudo : _no_value transcript_id : XR_032022.1

clone name	MSMg01-304O22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-353E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-424B01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440I11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-117B01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-529E24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389F18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-328F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-078M23
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-527G17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-306F12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-328J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-211O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-496F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-356I15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-524E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-074J16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-151E19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-048K05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-142K10
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-302F03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-334G15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-090G03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-526N21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-211O12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-384I11
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-396I05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-309D21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-422P19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-091E22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-353J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-328J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-535G08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-406A17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-360G11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-429I01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-545P16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-296D10
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-534N22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-353H02
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-548P07
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-345K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-513P08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-346I06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-526N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-086O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-105G20
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-487K08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-300E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-121L06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-129L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-319J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156P13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-336C11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018O17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-334B21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-225K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072P03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144C17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-140G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202M18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-237H17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285G07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-106P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092E21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-043O13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185D10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-184D12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-116E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-165A14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-099G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274H13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177H19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-265N19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300A19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182K08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-298C15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266H18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231F14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-157B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348G21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046L06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-172L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-203M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307B09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061N24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-271M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125F02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161G07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081C14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-162A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-271P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-173D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-342L17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-229I15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240K24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-345O19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-250J16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-310O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255N11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-178G24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-239P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-268O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315C11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-077N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284F17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-163O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209F16
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-031N02.b	B6Ng01-031N02.g
ACC	DH861328	DH861329
length	956	979
definition	DH861328\|Mus musculus domesticus DNA, BAC clone: B6Ng01-031N02, 5' end.	DH861329\|Mus musculus domesticus DNA, BAC clone: B6Ng01-031N02, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattcctctacaacctttattgcctagtacttgatagaaagtgattaaa aaactgattttgtagtaccttttatactaagaaagacaaataatatttta ctttattgtacctacttactacaaaaaaaagatgttatgttaagatattc tgagagttatgttaaatagtataaatctataaatatttgtgcgagaaaag tctttgcacaataaccactagaaatgattcataaaaattatccaatcatt tagatttattaaatggatgataattgtttagaagattttgataaagattc ctcagagaaaaactttaagctgggtggtgatgatgaatgcttttcatccc agcttttgggagggagaggcaggcaaactaatgagtttaggccagcctag tctacagagtgagtacactgtgtaaataaatataccacaatttctgtatc cattcctctgttgagggacatctggcttctgtccagcttctggctactat aaataaggatgctatgaacatagtagtgcatgtgtccttcttaccagttg gtccatattctgggtatatgcctaggaggagtattgctgaatcctctggt agtactatgtccaattttctgaggaatcaccagacttatttccagagtgg ttctacaagcttgcaatagcgccaacaatggaggaatgttcctctttctc cacatcctcaccagcatctgcttcacctgaattttttatcttagccattc tgactcgtgtgaggtgaaatctcagggttgttttgattttcatttacctg atgattaaggatgctgaacattttttcaggtgcttctcagcattcatatt cctcaagtgagaattcttttgtttagcactgagcccatttttaaagggta tttattttgggagtcaacttctgtgttctttattatatggaatcagtccc gaactg	gaattcattttctgtatataaaaactgactgtcttaaaaataatgtgctt gtagaaatatttgcaaaaatttggcttaaacaagatgttacctttcattc aggtatatatatatattttttgttattgtcagtttcactgcttaagacac tgtttcaggaagtctaggcatgacatccttgatcattttctcagttctga atctgtaaaattgtgtaaataagtccttttaacttggaagaatgacttga tgttcagaacattcttgcttcagggtacagtcctgctgttgtgactttat ttggggaatgaactagaaggctttgctgctcgtagaaccccaggattggg gaaaaattactatatttttcagttttccatgagtaacttgtgcaaaaaca taagtcaataaaagtcatgaagatgttatatgaaaacagatgtaccagac ctttatgctgtcagttagggagccaaagtgatagtttggataagggttta tctgtcttgttgatttttttcaaagaaccaacactttctttcattgattt tttttctcttcttttattgaattcagccctgcgtttgattatttcttgcc attttctttttattctagagttttcagttgtacagttaagtttctagcat aagatctctgtatatttcatataagaacttaatactatgaactttcctca gcaagactttccttgtgtcccaaatgtttgggtgggctgtatattcattt tcattgattctagaaagtccttaacattttttttttatttctgttttgac acagttttcattcagtagaaagttgcttcgtttccttgcaatagtagact ttctgttgtttctccctcttgtgaacactagtgttattgtggttgtctga tatgatgcagtggatatttcatcttatctatttaggcatactttgtgagc aagtatatggcaaatttggagaagttcat
quality values	Open. Hide. 61 43 43 30 61 61 61 61 61 61 50 47 24 61 61 61 61 61 61 61 61 61 59 61 61 59 59 43 55 59 59 61 61 61 59 61 61 61 61 61 59 59 59 61 55 59 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 59 61 61 59 61 61 61 61 61 61 59 59 55 59 59 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 55 59 61 59 44 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 59 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 61 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 45 61 59 55 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 40 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 47 52 61 61 61 61 61 61 61 61 50 61 53 61 61 61 61 61 61 61 61 53 53 50 61 61 53 61 61 61 53 61 61 32 61 61 39 61 61 47 61 61 52 61 61 61 53 50 61 61 61 61 61 61 61 45 61 52 52 53 50 57 53 57 57 53 57 39 32 57 47 57 47 57 53 53 53 57 32 53 47 47 38 52 50 47 52 53 45 57 45 53 53 48 41 57 57 45 47 32 47 57 38 45 57 47 28 53 52 36 28 47 30 57 53 53 53 53 53 33 52 52 47 52 32 52 36 53 52 28 52 43 18 50 50 52 53 52 45 23 31 50 28 40 22 48 39 53 42 42 41 57 52 42 40 38 38 23 36 23 52 32 35 34 31 29 33 31 34 23 34 22 39 40 34 46 24 38 34 32 33 33 52 42 37 28 15 12 53 57 57 57 24 33 42 52 24 33 41 25 48 42 27 51 22 29 29 28 37 35 44 48 32 18 41 16 33 29 6 46 10 36 33 57 53 30 29 32 32 29 21 45 34 47 36 33 12 46 51 46 31 32 48 51 51 34 29 29 38 51 29 16 36 31 30 35 29 23 33 35 31 10 9 10 14 14 17 7 23 21 30 14 18 33 33 22 18 46 47 48 51 34 28 26 33 29 15 29 28 28 29 28 27 28 14 5 30 22 34 20 27 11 12 7 10 36 24 26 28 11 8 7 16 19 29 29 11 36 28 24 15 23 18 29 31 7 16 36 30 29 14 23 28 17 26 38 26 29 23 43 31 36 14 21 41 51 41 31 18 41 23 20 36 14 34 7 9 46 33 14 5 19 19 23 14 17 19 18 8 8 10 10 5 14 32 16 10 32 5 6 12 18 7 32 30 28 5 13 13 7 6 7 11 14 8 7 23 6 20 5 6 5 12 32 26 16 5 9 8 8 7 7	Open. Hide. 61 61 49 59 61 49 38 59 59 59 59 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 59 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 50 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 45 61 61 61 52 61 61 61 61 61 61 47 39 61 61 53 57 40 47 53 40 57 57 57 57 57 57 57 57 57 57 57 53 45 57 57 57 40 47 57 57 57 57 57 57 53 57 53 57 53 53 53 53 57 57 57 53 53 57 57 57 53 43 57 53 50 45 57 57 57 53 57 53 53 57 53 52 47 52 33 52 50 53 57 57 57 47 57 52 32 38 39 57 57 57 53 53 39 57 57 57 52 45 40 53 57 50 57 40 57 50 53 41 23 57 52 32 48 41 52 53 41 40 53 42 53 37 38 31 57 43 57 57 47 53 38 36 37 41 40 50 53 53 38 52 39 53 52 50 50 53 44 42 50 40 50 51 52 38 38 42 50 37 16 57 24 57 38 33 42 33 33 37 38 33 42 33 53 53 48 39 46 43 39 57 35 40 38 37 40 33 25 37 39 53 35 52 24 53 57 37 33 40 25 46 45 30 47 36 33 57 36 29 47 53 24 57 24 57 33 57 57 48 32 40 57 47 36 33 53 27 37 37 33 41 39 38 35 38 51 51 32 29 27 40 32 44 29 25 51 34 30 40 24 48 51 39 31 25 23 30 18 47 38 36 28 28 25 51 51 46 47 51 51 46 47 29 29 37 51 43 29 32 46 29 51 46 34 27 32 29 20 29 28 29 30 51 46 36 28 31 28 41 29 26 18 24 33 8 33 51 34 23 20 39 29 28 27 7 17 14 34 51 29 33 32 20 30 34 21 34 24 22 29 23 31 33 13 29 22 38 51 28 29 21 43 18 19 34 28 46 23 35 20 8 51 7 11 29 18 20 36 14 23 39 7 7 39 17 24 28 20 12 34 8 25 31 11 20 28 8 27 33 13 19 30 20 33 26 31 28 22 21 28 27 28 21 28 16 36 24 18 20 25 29 25 19 29 51 34 18 38 29 31 31 34 34 34 34 22 26 28 51 20 9 14 26 27 19 28 26 29 25 51 23 22 12 23 26 9 14 17 18 14 17 15 22 23 23 19 26 15 22 35 14 32 44 35 8 10 35 9 34 33 15 26 14 35 8 20

Alignment Information

BAC End 1

BAC End 2

seq1: chr4_113061338_113062313
seq2: B6Ng01-031N02.g_66_1038

seq1  GAATTCATTTTCTGTATATAAAAACTGACTGTCTTAAAAATAATGTGCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTTCTGTATATAAAAACTGACTGTCTTAAAAATAATGTGCTT  50

seq1  GTAGAAATATTTGCAAAAATTTGGCTTAAACAAGATGTTACCTTTCATTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAAATATTTGCAAAAATTTGGCTTAAACAAGATGTTACCTTTCATTC  100

seq1  AGGTATATATATATATTTTTTGTTATTGTCAGTTTCACTGCTTAAGACAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTATATATATATATTTTTTGTTATTGTCAGTTTCACTGCTTAAGACAC  150

seq1  TGTTTCAGGAAGTCTAGGCATGACATCCTTGATCATTTTCTCAGTTCTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCAGGAAGTCTAGGCATGACATCCTTGATCATTTTCTCAGTTCTGA  200

seq1  ATCTGTAAAATTGTGTAAATAAGTCCTTTTAACTTGGAAGAATGACTTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTAAAATTGTGTAAATAAGTCCTTTTAACTTGGAAGAATGACTTGA  250

seq1  TGTTCAGAACATTCTTGCTTCAGGGTACAGTCCTGCTGTTGTGACTTTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCAGAACATTCTTGCTTCAGGGTACAGTCCTGCTGTTGTGACTTTAT  300

seq1  TTGGGGAATGAACTAGAAGGCTTTGCTGCTCGTAGAACCCCAGGATTGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGGAATGAACTAGAAGGCTTTGCTGCTCGTAGAACCCCAGGATTGGG  350

seq1  GAAAAATTACTATATTTTTCAGTTTTCCATGAGTAACTTGTGCAAAAACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAATTACTATATTTTTCAGTTTTCCATGAGTAACTTGTGCAAAAACA  400

seq1  TAAGTCAATAAAAGTCATGAAGATGTTATATGAAAACAGATGTACCAGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTCAATAAAAGTCATGAAGATGTTATATGAAAACAGATGTACCAGAC  450

seq1  CTTTATGCTGTCAGTTAGGGAGCCAAAGTGATAGTTTGGATAAGGGTTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATGCTGTCAGTTAGGGAGCCAAAGTGATAGTTTGGATAAGGGTTTA  500

seq1  TCTGTCTTGTTGATTTTTTTCAAAGAACCAACACTTTCTTTCATTGATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCTTGTTGATTTTTTTCAAAGAACCAACACTTTCTTTCATTGATTT  550

seq1  TTTTTCTCTTCTTTTATTGAATTCAGCCCTGCGTTTGATTATTTCTTGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTCTTCTTTTATTGAATTCAGCCCTGCGTTTGATTATTTCTTGCC  600

seq1  ATTTTCTTTTTATTCTAGAGTTTTCAGTTGTACAGTTAAGTTTCTAGCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCTTTTTATTCTAGAGTTTTCAGTTGTACAGTTAAGTTTCTAGCAT  650

seq1  AAGATCTCTGTATATTTCATATAAGAACTTAATACTATGAACTTTCCTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATCTCTGTATATTTCATATAAGAACTTAATACTATGAACTTTCCTCA  700

seq1  GCAAGACTTTCCTTGTGTCCCAAATGTTTGGGTGGGCTGTATATTCATTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGACTTTCCTTGTGTCCCAAATGTTTGGGTGGGCTGTATATTCATTT  750

seq1  TCATTGATTCTAGAAAGTCCTTAACA-TTTTTTTTTATTTCTGTTTTGAC  799
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TCATTGATTCTAGAAAGTCCTTAACATTTTTTTTTTATTTCTGTTTTGAC  800

seq1  ACAGTTTTCATTCAGTAGAAAGTTGCTTCGTTTCCTTGCAATAGTAGACT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTTTCATTCAGTAGAAAGTTGCTTCGTTTCCTTGCAATAGTAGACT  850

seq1  TTCTGTTGTTTCT-CCTCTTGTGAACAACTAGTGTTAATTGTGGTTGTCT  898
      ||||||||||||| |||||||||||| ||||||||| |||||||||||||
seq2  TTCTGTTGTTTCTCCCTCTTGTGAAC-ACTAGTGTT-ATTGTGGTTGTCT  898

seq1  GATATGATGCAAGTGGATATTTCAATCTTATCTATTTAGGCATACTTTGT  948
      |||||||||| |||||||||||| ||||||||||||||||||||||||||
seq2  GATATGATGC-AGTGGATATTTC-ATCTTATCTATTTAGGCATACTTTGT  946

seq1  GAGCAAGTATATGGCAAATTTTGGAGAA  976
      |||||||||||||||||| |||||||||
seq2  GAGCAAGTATATGGCAAA-TTTGGAGAA  973

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information