BAC Information

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BAC

Clone NameB6Ng01-031N15
Chromosome4 (Build37)
Map Location 37,269,056 - 37,270,072
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042132, LOC545600, LOC621458
Downstream geneLOC277771, LOC100039448
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-031N15.bB6Ng01-031N15.g
ACCDH861352DH861353
length1,2181,008
definitionDH861352|Mus musculus domesticus DNA, BAC clone: B6Ng01-031N15, 5' end.DH861353|Mus musculus domesticus DNA, BAC clone: B6Ng01-031N15, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctaccagtccctcagagaagacctgataccaatattcttcaaatt
attctacaaaatagaaacagaaggaacactacctaacttgatctgtgaag
ccacaattactctgatgcctaaaccacacaagggcccaactaaaaagaag
aacttctgatcaatcttgcttatgaatatggatgcaaaaatacttgatga
atatatttcaaacctaattcaagaacacatcaaaacatcattctcaatgg
ccaagtaggcttcatcacagggatgcaaggttggatcaatatatgaaaat
ctgttaaagtaacccactatataaacaaatttaaaaaatcagacaaccat
ctccttatatgcagaaaaaaatgacaaagtacaacacgccttcatgataa
aagtattgcagagatcagtaattcaaggcacatacattaacataataaaa
gcaatttactgcaaaccaacagccaatatcaaattaaatggaggcatact
tgaagtaaccacactaaaattggggacaagacaaggttgcccaatttccc
catatctattcaatataatactttaagtgcttggtagaataataacacaa
caaaaagagatcaagatgatacaaattggcaaagaagaattaaagttatc
actgtttgcagatgataggatagttacatatgccacccgcaaaattctac
cagagaacgtctcaagttgataaacaactttagcaaagtatccagataaa
attaactcaaataaaacagtaaccttcctttatacaaatgataaacaaag
aactcaaaaaagttaacaggaccatgggcccaattgaggacgccttagtc
ccacttgcaagggagaagaaagcaatcacaagtgggaagtaagagagacc
tgggagggaacctagatggaggtcagagctgggagagggaaactatctgg
tatgtgtgaaagaaagactgagactgaggccagcagaagaatggaacagc
acttgatatagatgtacggggatcctcagaaatacagagacttggaggtg
gagattcttagcttatagagaactgaatgattgctgacataggagagtac
ttatagtcacctccgacagagaccgcctcaagtaggagggttgcctccct
agctaaagatctagttcgtcaacttcgatgatgaacgagaaccgtggcaa
aaggactcgtgtacggtc
gaattcacatctagcctgactaactgaatacacctaaattggaaaaatta
aaataaaaataaaatgatttaaaaatattatagaaagaaattaggtagac
tagttttctagaaagtagaagatcctagattcagccctgataccaaggca
gaaatgaaaggaaaaaagaaaaattggttaaaaagacagggggaaataaa
aaaggaagggagggagaagcaaggaagagaagtaattcctactaggcata
attcacagaaacacttgtaatggacttcttagaagaagaaagctaagcat
caaaagcaatgttggcaatactctataccatgtgaaattttaaattatcg
ctgtttaaagtgtgtgtgtgtgtgtgtgtgtgtgtgtgcacgtgtgtgca
tgtgagtgcacatgtgttcgtgtatatgacaaaaaacaaactgtcaaatt
caattatttcttttgctcaatacaaacatccatcctcatgtcctacacaa
tgatcaaaactaatacagagtagaaattgccagctgtctagagcacacta
cccaaatgtgattgaaagtagaaaaggattcagcagcctagatttagagt
accattttcccttgttacatgtaccttacattgtcttagttattgattac
cacaaacaggtgaatgcttgtatcttcacagatacttgccatattgatgg
tttttaatgatgtcacagatgttagaactattacttgttttcctcatctg
gtaacttcaatagtactttctagaatagaaatagaatttctggaatagct
accagaatgcaagaaggacttccagttggatgtagacgaaccatcagagt
cctgtgtcatatgtgcaagattccttgaagcaacagtacttacttttttt
tttttaataggtattttctcattaaatttcaaatgctatcccaaaagtcc
ccaatagcccctttcctcccctacccaccatctccaattctggcctggca
tccctgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_37269056_37270072
seq2: B6Ng01-031N15.g_69_1076 (reverse)

seq1  TACAGGGGAATGCCAGGGCCAAGAATTGGGAGATGGTGGGTAGGGGAGTG  50
      |||||||  ||||||||  | |||||| |||||||||||||||||||| |
seq2  TACAGGG--ATGCCAGG--CCAGAATT-GGAGATGGTGGGTAGGGGAG-G  44

seq1  AAAGGGGGCTATGGGGGACTTTTGGGATAGCATTTGAAATGTAAATGAAG  100
      ||| |||||||| ||||||||||||||||||||||||||| | |||| ||
seq2  AAA-GGGGCTATTGGGGACTTTTGGGATAGCATTTGAAAT-TTAATG-AG  91

seq1  AAAATACCTAATTAAAAAAAAAAAGTAAGTAACTGTTGC-TCAAGGAATC  149
      |||||||||| | ||||||||||||||||| |||||||| ||||||||||
seq2  AAAATACCTATTAAAAAAAAAAAAGTAAGT-ACTGTTGCTTCAAGGAATC  140

seq1  TTGCACATATGACACAGGACTCTGATGGTTCGTCTACATCCAACTGGAAG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCACATATGACACAGGACTCTGATGGTTCGTCTACATCCAACTGGAAG  190

seq1  TCCTTCTTGCATTCTGGTAGCTATTCCAGAAATTCTATTTCTATTCTAGA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCTTGCATTCTGGTAGCTATTCCAGAAATTCTATTTCTATTCTAGA  240

seq1  AAGTACTATTGAAGTTACCAGATGAGGAAAACAAGTAATAGTTCTAACAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTACTATTGAAGTTACCAGATGAGGAAAACAAGTAATAGTTCTAACAT  290

seq1  CTGTGACATCATTAAAAACCATCAATATGGCAAGTATCTGTGAAGATACA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGACATCATTAAAAACCATCAATATGGCAAGTATCTGTGAAGATACA  340

seq1  AGCATTCACCTGTTTGTGGTAATCAATAACTAAGACAATGTAAGGTACAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTCACCTGTTTGTGGTAATCAATAACTAAGACAATGTAAGGTACAT  390

seq1  GTAACAAGGGAAAATGGTACTCTAAATCTAGGCTGCTGAATCCTTTTCTA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACAAGGGAAAATGGTACTCTAAATCTAGGCTGCTGAATCCTTTTCTA  440

seq1  CTTTCAATCACATTTGGGTAGTGTGCTCTAGACAGCTGGCAATTTCTACT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCAATCACATTTGGGTAGTGTGCTCTAGACAGCTGGCAATTTCTACT  490

seq1  CTGTATTAGTTTTGATCATTGTGTAGGACATGAGGATGGATGTTTGTATT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATTAGTTTTGATCATTGTGTAGGACATGAGGATGGATGTTTGTATT  540

seq1  GAGCAAAAGAAATAATTGAATTTGACAGTTTGTTTTTTGTCATATACACG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAAAAGAAATAATTGAATTTGACAGTTTGTTTTTTGTCATATACACG  590

seq1  AACACATGTGCACTCACATGCACACACGTGCACACACACACACACACACA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACATGTGCACTCACATGCACACACGTGCACACACACACACACACACA  640

seq1  CACACACACTTTAAACAGCGATAATTTAAAATTTCACATGGTATAGAGTA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACTTTAAACAGCGATAATTTAAAATTTCACATGGTATAGAGTA  690

seq1  TTGCCAACATTGCTTTTGATGCTTAGCTTTCTTCTTCTAAGAAGTCCATT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCAACATTGCTTTTGATGCTTAGCTTTCTTCTTCTAAGAAGTCCATT  740

seq1  ACAAGTGTTTCTGTGAATTATGCCTAGTAGGAATTACTTCTCTTCCTTGC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTGTTTCTGTGAATTATGCCTAGTAGGAATTACTTCTCTTCCTTGC  790

seq1  TTCTCCCTCCCTTCCTTTTTTATTTCCCCCTGTCTTTTTAACCAATTTTT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCCTCCCTTCCTTTTTTATTTCCCCCTGTCTTTTTAACCAATTTTT  840

seq1  CTTTTTTCCTTTCATTTCTGCCTTGGTATCAGGGCTGAATCTAGGATCTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTTCCTTTCATTTCTGCCTTGGTATCAGGGCTGAATCTAGGATCTT  890

seq1  CTACTTTCTAGAAAACTAGTCTACCTAATTTCTTTCTATAATATTTTTAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTTCTAGAAAACTAGTCTACCTAATTTCTTTCTATAATATTTTTAA  940

seq1  ATCATTTTATTTTTATTTTAATTTTTCCAATTTAGGTGTATTCAGTTAGT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTTTATTTTTATTTTAATTTTTCCAATTTAGGTGTATTCAGTTAGT  990

seq1  CAGGCTAGATGTGAATTC  1017
      ||||||||||||||||||
seq2  CAGGCTAGATGTGAATTC  1008