BAC Information

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BAC

Clone NameB6Ng01-032F18
Chromosome4 (Build37)
Map Location 145,710,594 - 145,711,707
singlet/doubletsinglet
Overlap genenone
Upstream geneVps13d, Tnfrsf1b, Tnfrsf8, LOC666282, 9230115A19Rik, LOC195576, LOC622846, LOC666314, LOC545701, OTTMUSG00000010965, LOC666334, LOC545703, LOC384081, LOC100041379, LOC666349, LOC666351, LOC545704, 1700029I01Rik, LOC236069, LOC384084, LOC666386, LOC666390, LOC100041433
Downstream geneLOC433790, LOC433791, Rex2, LOC100043012, LOC100041461, LOC630093, OTTMUSG00000010105, LOC666445, MGC117846, OTTMUSG00000010694, LOC626480, LOC666474, LOC666482, LOC434514, LOC626288, LOC666498, LOC100043034, LOC666514, LOC100041561, LOC100041570, OTTMUSG00000010657, LOC384087, LOC666546, LOC666557, LOC545716, LOC666574, LOC666581
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-032F18.bB6Ng01-032F18.g
ACCDH861721DH861722
length1,112989
definitionDH861721|Mus musculus domesticus DNA, BAC clone: B6Ng01-032F18, 5' end.DH861722|Mus musculus domesticus DNA, BAC clone: B6Ng01-032F18, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctgtgtacaaatacagatacttccaaggatctaagaggttattt
tagaaaaatattctggggctggagagatggctcagtggttaagagcactg
attgctcttccgaaggtcctgagttcaaatcccagcaaccgcatgatggc
tcacaaccatctgtaatgagatctgacgccctcttctggtgtatctaaaa
gacagctacagtgtacttagatataataataaataaatcttttaaaaaaa
tagaaaaatattctggaacttataaaattaattaaaatatcaccaaaaac
cccaggttcatagtatctcaaacttctccaaaatggtaagatatccatga
cagaattgtgagagtggcaggagaaaatacacccctgcccacacccctgt
tcttctcctgcccatttcccagcccaacagctgctctgaccttgaagttg
aaagtactagctgctgaatattctgtgagtaaggcacagcaactgcagct
taaggaggtaccacaaatactctgactactctcccactaccacttcctga
ccatgatgcagccgagatacattgtcttttatatatgaaggacaagcccc
cttcaatttagaaattgcctttcctctaatggacatgttcaacttcattc
tatgcttcttggtcatatacatgaaggtaaggattagtttaatttcttaa
caaaagcttgttggttttcctatgaagataacttagcaagatcttacatt
acaaatcaccattgcactcagaaaactggtcctgcattcctgcaaagctg
ttagctcagcttgggtatttaacccctgatgagcctatatccctgggatt
taaaacagacaaatgttacacatgtcctgtcttttcgaaagtttgccttt
atgcctgtatgtatgtatgcttaattctcattgttatttatgccttggcc
taacctggggaaagtttcaaaaatatgatacagtatttgtttcattagtt
tataatgccaaggcctcaaaatcagaaaaataccatgtttaacataaaac
gcgtaataaattaatgtttgactcttaaatttcttatgtccactgacatt
actataaataca
gaattctctgtttaggtattgtactggctagttttgtgtcaacttgacac
aactggagttatcacagagaaaggagcttcagttgaggaaatttctccat
gagatccaactgtaaggcattttctcaattagtgatcaagggggaaaggc
ccttgtggttgggaccatctcagggctggtagtcttggttctataagaaa
gcaggctgagcaagccaggggaggcaagccagtacagaacatccctccat
ggcctctgcatcagctcctgctccctgacctgcttgagttccagtcctga
cttcctttggtgatgaacagcagtatggaagtgtaagccaaataaaccct
ttcctccccaacttgcttcttggtcatgatgtttgtgcaggaatagaaac
cctgactaagacaaattggtaccagcagagtggggtattcctgtgacaac
ctgaccatgttttggggaggactgtggaaggactttggaactttgggctt
gaagatccatccattgttaagagctctgtcggatgttgtgtaggagcttg
gaagatactgttgagaacactgcagaagatggaggtctggtttgtgaaat
ttcagagggaaaattaaagactcttttcagggccattgctgttttgaatg
tgaagattctgtagttctggttagctggggctgaagaatcagttgtgatt
aacaagataccagaactactgaagcaaaaactttgcattactgggactat
tgatgctggttagctggagctaagaaattagtggtgattaagaagagacc
agcatcattgaggtgacatcttctgggaagtgttttttgaaagcacaaag
aggctgttgttccagagatggccaaggttgtactcctgctgcagcaagac
tttggtatatgtaggtcacccaaggtggtactgttttgaggcatgagggt
cacgcaaagcacctgaggctcggcatgtgagaggccatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_145710594_145711707
seq2: B6Ng01-032F18.b_46_1157

seq1  GAATTCCTGTGTACAAATACAGATACTTCCAAGGATCTAAGAGGTTATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGTGTACAAATACAGATACTTCCAAGGATCTAAGAGGTTATTT  50

seq1  TAGAAAAATATTCTGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAAATATTCTGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTG  100

seq1  ATTGCTCTTCCGAAGGTCCTGAGTTCAAATCCCAGCAACCGCATGATGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTCTTCCGAAGGTCCTGAGTTCAAATCCCAGCAACCGCATGATGGC  150

seq1  TCACAACCATCTGTAATGAGATCTGACGCCCTCTTCTGGTGTATCTAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAACCATCTGTAATGAGATCTGACGCCCTCTTCTGGTGTATCTAAAA  200

seq1  GACAGCTACAGTGTACTTAGATATAATAATAAATAAATCTTTTAAAAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGCTACAGTGTACTTAGATATAATAATAAATAAATCTTTTAAAAAAA  250

seq1  TAGAAAAATATTCTGGAACTTATAAAATTAATTAAAATATCACCAAAAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAAATATTCTGGAACTTATAAAATTAATTAAAATATCACCAAAAAC  300

seq1  CCCAGGTTCATAGTATCTCAAACTTCTCCAAAATGGTAAGATATCCATGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGTTCATAGTATCTCAAACTTCTCCAAAATGGTAAGATATCCATGA  350

seq1  CAGAATTGTGAGAGTGGCAGGAGAAAATACACCCCTGCCCACACCCCTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATTGTGAGAGTGGCAGGAGAAAATACACCCCTGCCCACACCCCTGT  400

seq1  TCTTCTCCTGCCCATTTCCCAGCCCAACAGCTGCTCTGACCTTGAAGTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTCCTGCCCATTTCCCAGCCCAACAGCTGCTCTGACCTTGAAGTTG  450

seq1  AAAGTACTAGCTGCTGAATATTCTGTGAGTAAGGCACAGCAACTGCAGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTACTAGCTGCTGAATATTCTGTGAGTAAGGCACAGCAACTGCAGCT  500

seq1  TAAGGAGGTACCACAAATACTCTGACTACTCTCCCACTACCACTTCCTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGAGGTACCACAAATACTCTGACTACTCTCCCACTACCACTTCCTGA  550

seq1  CCATGATGCAGCCGAGATACATTGTCTTTTATATATGAAGGACAAGCCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGATGCAGCCGAGATACATTGTCTTTTATATATGAAGGACAAGCCCC  600

seq1  CTTCAATTTAGAAATTGCCTTTCCTCTAATGGACATGTTCAACTTCATTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAATTTAGAAATTGCCTTTCCTCTAATGGACATGTTCAACTTCATTC  650

seq1  TATGCTTCTTGGTCATATACATGAAGGTAAGGATTAGTTTAATTTCTTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCTTCTTGGTCATATACATGAAGGTAAGGATTAGTTTAATTTCTTAA  700

seq1  CAAAAGCTTGTTGGTTTTCCTATGAAGATAACTTAGCAAGATCTTACATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGCTTGTTGGTTTTCCTATGAAGATAACTTAGCAAGATCTTACATT  750

seq1  ACAAATCACCATTGCACTCAGAAAACTGGTCCTGCATTCCTGCAAAGCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATCACCATTGCACTCAGAAAACTGGTCCTGCATTCCTGCAAAGCTG  800

seq1  TTAGCTCAGCTTGGGTATTTAACCCCTGATGAGCCTATATCCCTGGGATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTCAGCTTGGGTATTTAACCCCTGATGAGCCTATATCCCTGGGATT  850

seq1  TAAAACAGACAAATGTTACACATGTCCTGTCTTTTCGAAAGTTTGCCTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACAGACAAATGTTACACATGTCCTGTCTTTTCGAAAGTTTGCCTTT  900

seq1  ATGCCTGTATGTATGTATGCTTAATTCTCATTGTTATTTATGCCTTGGCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCTGTATGTATGTATGCTTAATTCTCATTGTTATTTATGCCTTGGCC  950

seq1  TAACCTGGGGAAAGTTTCAAAAATATGATACAGTATTTGTTTCATTAGTT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCTGGGGAAAGTTTCAAAAATATGATACAGTATTTGTTTCATTAGTT  1000

seq1  TATAATGCCAAGGCCTCAAAATCAG-AAAATACCATTGTTTAAACATAAA  1049
      ||||||||||||||||||||||||| ||||||||| ||||| ||||||||
seq2  TATAATGCCAAGGCCTCAAAATCAGAAAAATACCA-TGTTT-AACATAAA  1048

seq1  ACGCGTATTAAAATTAATGTTTGACTCTT-AATTTCTTATAGTCCACTGA  1098
      ||||||| | ||||||||||||||||||| |||||||||| |||||||||
seq2  ACGCGTAAT-AAATTAATGTTTGACTCTTAAATTTCTTAT-GTCCACTGA  1096

seq1  CATTACCTAT-AATACA  1114
      ||||| |||| ||||||
seq2  CATTA-CTATAAATACA  1112