BAC Information

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BAC

Clone NameB6Ng01-032N14
Chromosome4 (Build37)
Map Location 61,864,766 - 62,019,786
singlet/doubletdoublet
Overlap geneZfp37, Slc31a2, Fkbp15
Upstream geneLOC100039089, LOC667239, LOC100039116, LOC667242, LOC100039150, LOC100039019, LOC100039177, LOC621093, LOC100039206, LOC621127, LOC100039228, LOC384021, LOC100039247, LOC667278, Mup5, LOC435785, LOC667295, LOC100039305, LOC546832, OTTMUSG00000007485, Mup3, LOC100039345, OTTMUSG00000000231
Downstream geneSlc31a1, Cdc26, Prpf4, Rnf183, Wdr31, Bspry, Hdhd3, Alad, Pole3, 4933430I17Rik, Rgs3, Zfp618, Ambp, Kif12, Col27a1, Orm1, Orm-ps, Orm3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-032N14.bB6Ng01-032N14.g
ACCDH862066DH862067
length1,143819
definitionDH862066|Mus musculus domesticus DNA, BAC clone: B6Ng01-032N14, 5' end.DH862067|Mus musculus domesticus DNA, BAC clone: B6Ng01-032N14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(62,018,638 - 62,019,786)(61,864,766 - 61,865,584)
sequence
gaattctttatatagaccaagctgaccttgaactcacaggattctgcctg
tcttccccctggatgatgggattaaaaaagcatgtgccatcacacccagt
ctcaaggtatattttaatttcataatctttagtatgtgagaatatttgaa
gacagtttatgaaggtattttaaggcttccaactttcatgcatcaaagaa
tctgctgctgacgaggcagacagtgacagtcatgtgctcttctgattcct
tacccaaggaatcaatctcctttcccaggaaggcttaactaagaattgaa
gatactttacacatatgattgtgggtcctaggcatagaaaacagacaatt
tgatgataaaagactcaacagagaaagctacacacagatacatttttgtc
ccctgtagtagctaggaaaaaataaattttgttcccggtagtagctagga
aaacagaatcaaacttaagagtaagactaggaaaaatgagttggagaggt
agcttggtggttgagagcactggaggaattggatttgattcccagcaccc
acatggtggctcacaacagtctgtaactccagtccctggaaatccgagac
catcttctggctttttggggtaccaggcatacaaatggtgtttaggcata
catacagacaaaacactaacacataaaataaaatgaagaaaagaagacca
gagaaagttttgtgtgcattctctgatttggctgttcctccattggtttt
gtaaggaagtagaacatctgacagtgaacactgcagctctttccagttcc
ccttttataaatgtggtttactttaaaactgcttccctaagtttgactta
accttctgactttcttgttcctactcaggctattgagggctaactgaagc
atcctaagtccaggatggctgttttcagtgactgataatctgctgttcag
ttcccgggcctcttttgtttatttacttgcttgtttgtttttgagacatg
atcttactggtgtagcttctggtgtcctggtactcacatgtatactagac
tgaactctgactccaaaatctacttgcttctttcctctagtgctgagact
aaaggcataagccactcggacatgccaagttctccacttaaag
gaattcattaagagaaaatatgacacattagggaactggtgtgcaggtag
aagacagggacaattgaggattcttttttagatttggtaaacagaaacga
gattgagagttaagagctcagcgatgggcatacaggatggaaaggggttg
gggaaggagctgggcacgtcgggctgctgagccctggacttcagctttcc
ccctatcacagagtggtggctgattgtacttttgctctttatgaaagtac
atgcatcactagctcctcagaagcatggcatttggaattgcagcacctct
cctatgaagagattatgcatgcctaccctctgagccagatgcttaaatgt
agctacagtggagctaccacatccaagcagtgattcatacaaggattaat
taagtggtttcatttacccttttttttttcttctccataagagcttgtca
tgagcctctcatgtggacaggtttatagaaaaaggagatattagaatctc
caaagaaaacatctgtactttgaattccttttctcctgagagattctggt
tgttttgttttgttttttgttttttttgtttttgtttttgttttttctac
tagttcctggttaaaaaaagaaaacctaggacttttaagaaaaaaaattt
ttttttccatattgggaattaaatctaggtccttgtgagaaatcactcta
ttctgagctgtattcccagctctaataaaattttacaaattactctttga
agaattccatacttaccgccaagaaacgaaaaacttacttgcacttgtcc
tgctgtcttgggccttgct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_62018638_62019786
seq2: B6Ng01-032N14.b_47_1189 (reverse)

seq1  CTTTAAGGTTGGAGAACTTGGCCATG-CCTGGTGGCTCATGCCTTTAGTC  49
      |||||||  |||||||||||| |||| ||  |||||| ||||||||||||
seq2  CTTTAAG--TGGAGAACTTGG-CATGTCCGAGTGGCTTATGCCTTTAGTC  47

seq1  TCAGCACTCAGGAGGAAGAAGCAAGTAGATTTCTGAGTCAGAGGTCAGTC  99
      |||||||| ||  | |||||||||||||||||  ||||||||| ||||||
seq2  TCAGCACT-AGAGGAAAGAAGCAAGTAGATTTTGGAGTCAGAGTTCAGTC  96

seq1  TAGTATACATTGTGAGTACCAGGACAACCAG-AGCTACA-CAGTAAGATC  147
      ||||||||| ||||||||||||||| ||||| ||||||| ||||||||||
seq2  TAGTATACA-TGTGAGTACCAGGAC-ACCAGAAGCTACACCAGTAAGATC  144

seq1  ATGTCTCAAAAACAAACAAGCAAGTAAATAAACAAAAAGAGGCCCGGGAA  197
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  ATGTCTCAAAAACAAACAAGCAAGTAAATAAAC-AAAAGAGGCCCGGGAA  193

seq1  CTTGAACAGCAGATTATCAGTCACTGAAAACAGCCATCCTGGACTTTAGG  247
      | |||||||||||||||||||||||||||||||||||||||||| |||||
seq2  C-TGAACAGCAGATTATCAGTCACTGAAAACAGCCATCCTGGAC-TTAGG  241

seq1  ATGCTTCAGTTAGCCCTCAATAGCCTGAGTAGGAACAAGAAAGTCAGAAG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTCAGTTAGCCCTCAATAGCCTGAGTAGGAACAAGAAAGTCAGAAG  291

seq1  GTTAAGTCAAACTTAGGGAAGCAGTTTTAAAGTAAACCACATTTATAAAA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAGTCAAACTTAGGGAAGCAGTTTTAAAGTAAACCACATTTATAAAA  341

seq1  GGGGAACTGGAAAGAGCTGCAGTGTTCACTGTCAGATGTTCTACTTCCTT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAACTGGAAAGAGCTGCAGTGTTCACTGTCAGATGTTCTACTTCCTT  391

seq1  ACAAAACCAATGGAGGAACAGCCAAATCAGAGAATGCACACAAAACTTTC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAACCAATGGAGGAACAGCCAAATCAGAGAATGCACACAAAACTTTC  441

seq1  TCTGGTCTTCTTTTCTTCATTTTATTTTATGTGTTAGTGTTTTGTCTGTA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTCTTCTTTTCTTCATTTTATTTTATGTGTTAGTGTTTTGTCTGTA  491

seq1  TGTATGCCTAAACACCATTTGTATGCCTGGTACCCCAAAAAGCCAGAAGA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGCCTAAACACCATTTGTATGCCTGGTACCCCAAAAAGCCAGAAGA  541

seq1  TGGTCTCGGATTTCCAGGGACTGGAGTTACAGACTGTTGTGAGCCACCAT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTCGGATTTCCAGGGACTGGAGTTACAGACTGTTGTGAGCCACCAT  591

seq1  GTGGGTGCTGGGAATCAAATCCAATTCCTCCAGTGCTCTCAACCACCAAG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGTGCTGGGAATCAAATCCAATTCCTCCAGTGCTCTCAACCACCAAG  641

seq1  CTACCTCTCCAACTCATTTTTCCTAGTCTTACTCTTAAGTTTGATTCTGT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCTCTCCAACTCATTTTTCCTAGTCTTACTCTTAAGTTTGATTCTGT  691

seq1  TTTCCTAGCTACTACCGGGAACAAAATTTATTTTTTCCTAGCTACTACAG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTAGCTACTACCGGGAACAAAATTTATTTTTTCCTAGCTACTACAG  741

seq1  GGGACAAAAATGTATCTGTGTGTAGCTTTCTCTGTTGAGTCTTTTATCAT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACAAAAATGTATCTGTGTGTAGCTTTCTCTGTTGAGTCTTTTATCAT  791

seq1  CAAATTGTCTGTTTTCTATGCCTAGGACCCACAATCATATGTGTAAAGTA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTGTCTGTTTTCTATGCCTAGGACCCACAATCATATGTGTAAAGTA  841

seq1  TCTTCAATTCTTAGTTAAGCCTTCCTGGGAAAGGAGATTGATTCCTTGGG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAATTCTTAGTTAAGCCTTCCTGGGAAAGGAGATTGATTCCTTGGG  891

seq1  TAAGGAATCAGAAGAGCACATGACTGTCACTGTCTGCCTCGTCAGCAGCA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGAATCAGAAGAGCACATGACTGTCACTGTCTGCCTCGTCAGCAGCA  941

seq1  GATTCTTTGATGCATGAAAGTTGGAAGCCTTAAAATACCTTCATAAACTG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTTTGATGCATGAAAGTTGGAAGCCTTAAAATACCTTCATAAACTG  991

seq1  TCTTCAAATATTCTCACATACTAAAGATTATGAAATTAAAATATACCTTG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAAATATTCTCACATACTAAAGATTATGAAATTAAAATATACCTTG  1041

seq1  AGACTGGGTGTGATGGCACATGCTTTTTTAATCCCATCATCCAGGGGGAA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGGGTGTGATGGCACATGCTTTTTTAATCCCATCATCCAGGGGGAA  1091

seq1  GACAGGCAGAATCCTGTGAGTTCAAGGTCAGCTTGGTCTATATAAAGAAT  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGCAGAATCCTGTGAGTTCAAGGTCAGCTTGGTCTATATAAAGAAT  1141

seq1  TC  1149
      ||
seq2  TC  1143

seq1: chr4_61864766_61865584
seq2: B6Ng01-032N14.g_68_886

seq1  GAATTCATTAAGAGAAAATATGACACATTAGGGAACTGGTGTGCAGGTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTAAGAGAAAATATGACACATTAGGGAACTGGTGTGCAGGTAG  50

seq1  AAGACAGGGACAATTGAGGATTCTTTTTTAGATTTGGTAAACAGAAACGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAGGGACAATTGAGGATTCTTTTTTAGATTTGGTAAACAGAAACGA  100

seq1  GATTGAGAGTTAAGAGCTCAGCGATGGGCATACAGGATGGAAAGGGGTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGAGAGTTAAGAGCTCAGCGATGGGCATACAGGATGGAAAGGGGTTG  150

seq1  GGGAAGGAGCTGGGCACGTCGGGCTGCTGAGCCCTGGACTTCAGCTTTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGGAGCTGGGCACGTCGGGCTGCTGAGCCCTGGACTTCAGCTTTCC  200

seq1  CCCTATCACAGAGTGGTGGCTGATTGTACTTTTGCTCTTTATGAAAGTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTATCACAGAGTGGTGGCTGATTGTACTTTTGCTCTTTATGAAAGTAC  250

seq1  ATGCATCACTAGCTCCTCAGAAGCATGGCATTTGGAATTGCAGCACCTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATCACTAGCTCCTCAGAAGCATGGCATTTGGAATTGCAGCACCTCT  300

seq1  CCTATGAAGAGATTATGCATGCCTACCCTCTGAGCCAGATGCTTAAATGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATGAAGAGATTATGCATGCCTACCCTCTGAGCCAGATGCTTAAATGT  350

seq1  AGCTACAGTGGAGCTACCACATCCAAGCAGTGATTCATACAAGGATTAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTACAGTGGAGCTACCACATCCAAGCAGTGATTCATACAAGGATTAAT  400

seq1  TAAGTGGTTTCATTTACCCTTTTTTTTTTCTTCTCCATAAGAGCTTGTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGGTTTCATTTACCCTTTTTTTTTTCTTCTCCATAAGAGCTTGTCA  450

seq1  TGAGCCTCTCATGTGGACAGGTTTATAGAAAAAGGAGATATTAGAATCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCCTCTCATGTGGACAGGTTTATAGAAAAAGGAGATATTAGAATCTC  500

seq1  CAAAGAAAACATCTGTACTTTGAATTCCTTTTCTCCTGAGAGATTCTGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGAAAACATCTGTACTTTGAATTCCTTTTCTCCTGAGAGATTCTGGT  550

seq1  TGTTTTGTTTTGTTTTTTGTTTTTTTTGTTTTTGTTTTTGTTTTTTCTAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTGTTTTGTTTTTTGTTTTTTTTGTTTTTGTTTTTGTTTTTTCTAC  600

seq1  TAGTTCCTGGTTAAAAAAAGAAAACCTAGGACTTTTAAGAAAAAAAA-TT  649
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TAGTTCCTGGTTAAAAAAAGAAAACCTAGGACTTTTAAGAAAAAAAATTT  650

seq1  TTTTTTCCATATTGGGAATTAAATCTAGGTCCTTGTGAGAAATCACTCTA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCCATATTGGGAATTAAATCTAGGTCCTTGTGAGAAATCACTCTA  700

seq1  TTCTGAGCTGTATTCCCAGCTCTAATAAAAGTTTACAAATTACTCTTTGA  749
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TTCTGAGCTGTATTCCCAGCTCTAATAAAATTTTACAAATTACTCTTTGA  750

seq1  AGAATTCCAAACTTACCGCCAAGAAACGAAAAACTTACTTGCACTTGTTC  799
      ||||||||| ||||||||||||||||||||||||||||||||||||| ||
seq2  AGAATTCCATACTTACCGCCAAGAAACGAAAAACTTACTTGCACTTG-TC  799

seq1  CTGCTGTCTTGGGCCTTGCT  819
      ||||||||||||||||||||
seq2  CTGCTGTCTTGGGCCTTGCT  819