BAC Information

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BAC

Clone NameB6Ng01-032O22
Chromosome4 (Build37)
Map Location 12,914,380 - 13,010,864
singlet/doubletdoublet
Overlap genenone
Upstream geneTmem67, C430048L16Rik, LOC230010, LOC623671, LOC100039958, Rbm12b, 6720467C03Rik, LOC545592, OTTMUSG00000004461
Downstream geneLOC100039988, Runx1t1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-032O22.bB6Ng01-032O22.g
ACCDH862128DH862129
length1,1041,019
definitionDH862128|Mus musculus domesticus DNA, BAC clone: B6Ng01-032O22, 5' end.DH862129|Mus musculus domesticus DNA, BAC clone: B6Ng01-032O22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(12,914,380 - 12,915,495)(13,009,839 - 13,010,864)
sequence
gaattcttcatctctatttttcagagagtgttaagagggaagagactcat
tgagttacttaaaggttaaaacacctactgagcatgtttccaatttttta
ttgtctttcttaacagttattaagtatctattaggtattaagtatgtctt
gtcagccttcacctttcctctggagaagtataagggctgaaatagtttta
ctattttcacagtgacaaagtcatttattatttacacacaacctatctat
tgttctgaatcccactaactgtgctttgtgctcacaagaaggaaaaaaaa
ggccaatacttatatactggtatttttcaaaacctagtttaataagtgta
cttaaatgctttaacctcccttctatcggaacagaggtagtagaaaggaa
aggttaatagatcaaaggaggatgtgaacctgtttagatccattcacaaa
caccattcaagaatcagcaacgagagtttgatccagaagaaactatgagg
ctctgtcaatcagccagagtcagcagaagcagcaagaagctgcaggaaca
ccaccagaagttctttggtgcatttctctatatgaagtaagaacaaagaa
tgatcagcaaagagtggcaaggtgaaccaataccacacagcattgcctac
tgtctgttgggctatacttatactcttcccaaacatcacttgttctctca
agcatcctctttagcaaaatatcacatgacctttttccaggcagcttcca
gaaaaacaccacatgtctgttcttaacaaaacatcctcccatgtgcctgc
ttcagcaaaaacatcctctcacaagtcagtttccagaaaatcatcacatg
atgcaactgagtctacaaagaaaccagaatattcaaatattttttttatt
tttctccaaaaacaatttttattagatattttcttcatttacattcaaat
gctatcctgaaagtcccctatacactcccctgccatgctcccaacccacc
acttcccctcctgctctggcattccctataactgcagcatatatctcaca
gaccagggcctctctctcccattgagggcactaggcatcttctgctacta
tgct
gaattcaaatcagtgtgataagaacacataatgcttttcaaggtttatta
tggttttctaatggaagacattccaaaattcacccaacatagagagcaga
aaactagctagaaaggaaaataagaaactgtatcgaaattactgattctt
ttttctctcaaatgacattattagaactagaaagacaaaacctttgttat
aaacaagcatgcaatgaaatgtggagagtttatagtatgggtgaagggga
caggatgatagcaggtgacaaatcaggatcctagtatgttgactaatgag
gctatgatctggctggtcagagagatgtttgaaaggagcagccaattaca
gtattggctgctacagtcccgtagataaactatgactgaatttagtgcat
tgcttgccttttgctatttcacaagacacttcaatgctcaaatatcaatt
ttttttcactcctgtgtctgaaacttgactggaactagttgatgtggatt
ggacgctgcttcaattaactttattttgcagactgaaacgtccctggtcc
catgggtaaattgagatgtggatatgaactttatacaactatggcaataa
gaggatcaaacaggggcaactgatagttgtaaggccaagatagagctggt
atacatcaattgtgtacatagtttagtggccaaaggcaacgccatgttca
aacttaaaatcagttggataggggtatatacttcacatccagaagatact
gtgaaatggcatagtgaaggccaaatacatgccaatttaggtttgtgaat
tagtgtgtaaatgtttgtggcaataagaaaaacatatttcatcttgaaat
gtttaaagttcttaaattgataactcctcagtttcagtctatactagatc
actaagtaatatatccagttctggatatcgatgcaaggggaataaagact
ggggacactaatgatctaccatggaagaaacactatgtatagcattgtct
tcgtctgatgcagcaatga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_12914380_12915495
seq2: B6Ng01-032O22.b_48_1151

seq1  GAATTCTTCATCTCTATTTTTCAGAGAGTGTTAAGAGGGAAGAGACTCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCATCTCTATTTTTCAGAGAGTGTTAAGAGGGAAGAGACTCAT  50

seq1  TGAGTTACTTAAAGGTTAAAACACCTACTGAGCATGTTTCCAATTTTTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTACTTAAAGGTTAAAACACCTACTGAGCATGTTTCCAATTTTTTA  100

seq1  TTGTCTTTCTTAACAGTTATTAAGTATCTATTAGGTATTAAGTATGTCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTTTCTTAACAGTTATTAAGTATCTATTAGGTATTAAGTATGTCTT  150

seq1  GTCAGCCTTCACCTTTCCTCTGGAGAAGTATAAGGGCTGAAATAGTTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGCCTTCACCTTTCCTCTGGAGAAGTATAAGGGCTGAAATAGTTTTA  200

seq1  CTATTTTCACAGTGACAAAGTCATTTATTATTTACACACAACCTATCTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTTCACAGTGACAAAGTCATTTATTATTTACACACAACCTATCTAT  250

seq1  TGTTCTGAATCCCACTAACTGTGCTTTGTGCTCACAAGAAGGAAAAAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTGAATCCCACTAACTGTGCTTTGTGCTCACAAGAAGGAAAAAAAA  300

seq1  GGCCAATACTTATATACTGGTATTTTTCAAAACCTAGTTTAATAAGTGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAATACTTATATACTGGTATTTTTCAAAACCTAGTTTAATAAGTGTA  350

seq1  CTTAAATGCTTTAACCTCCCTTCTATCGGAACAGAGGTAGTAGAAAGGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAATGCTTTAACCTCCCTTCTATCGGAACAGAGGTAGTAGAAAGGAA  400

seq1  AGGTTAATAGATCAAAGGAGGATGTGAACCTGTTTAGATCCATTCACAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTAATAGATCAAAGGAGGATGTGAACCTGTTTAGATCCATTCACAAA  450

seq1  CACCATTCAAGAATCAGCAACGAGAGTTTGATCCAGAAGAAACTATGAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATTCAAGAATCAGCAACGAGAGTTTGATCCAGAAGAAACTATGAGG  500

seq1  CTCTGTCAATCAGCCAGAGTCAGCAGAAGCAGCAAGAAGCTGCAGGAACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTCAATCAGCCAGAGTCAGCAGAAGCAGCAAGAAGCTGCAGGAACA  550

seq1  CCACCAGAAGTTCTTTGGTGCATTTCTCTATATGAAGTAAGAACAAAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCAGAAGTTCTTTGGTGCATTTCTCTATATGAAGTAAGAACAAAGAA  600

seq1  TGATCAGCAAAGAGTGGCAAGGTGAACCAATACCACACAGCATTGCCTAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCAGCAAAGAGTGGCAAGGTGAACCAATACCACACAGCATTGCCTAC  650

seq1  TGTCTGTTGGGCTATACTTATACTCTTCCCAAACATCACTTGTTCTCTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGTTGGGCTATACTTATACTCTTCCCAAACATCACTTGTTCTCTCA  700

seq1  AGCATCCTCTTTAGCAAAATATCACATGACCTTTTTCCAGGCAGCTTCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCCTCTTTAGCAAAATATCACATGACCTTTTTCCAGGCAGCTTCCA  750

seq1  GAAAAACACCACATGTCTGTTCTTAACAAAACATCCTCCCATGTGCCTGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAACACCACATGTCTGTTCTTAACAAAACATCCTCCCATGTGCCTGC  800

seq1  TTCAGCAAAAACATCCTCTCACAAGTCAGTTTCCAGAAAATCATCACATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCAAAAACATCCTCTCACAAGTCAGTTTCCAGAAAATCATCACATG  850

seq1  ATGCAACTGAGTCTACAAAGAAACCAGAATATTCAAATATTTTTTTTATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAACTGAGTCTACAAAGAAACCAGAATATTCAAATATTTTTTTTATT  900

seq1  TTTCTCCAAAAACAATTTTTATTAGATATTTTCTTCATTTACATTTCAAA  950
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TTTCTCCAAAAACAATTTTTATTAGATATTTTCTTCATTTACA-TTCAAA  949

seq1  TGCTATCCTGAAAGTCCCCTATACACTCCCCCTGCCATGCTCCCCAACCC  1000
      ||||||||||||||||||||||||||| ||||||||||||| ||||||||
seq2  TGCTATCCTGAAAGTCCCCTATACACT-CCCCTGCCATGCT-CCCAACCC  997

seq1  ACCCACTCCCCCTCCTGGCTCTGGCATTCCCCTAT-ACTGCAGCATATAA  1049
      | ||||| |||||||| ||||||||||| |||||| |||||||||||| |
seq2  A-CCACTTCCCCTCCT-GCTCTGGCATT-CCCTATAACTGCAGCATAT-A  1043

seq1  TCTTCACAAGACCAAGGGCCTCTC-CTCCCAATGAGGGCCAACTAGGCCA  1098
      || |||| ||||| |||||||||| |||||| |||||||  |||||| ||
seq2  TC-TCAC-AGACC-AGGGCCTCTCTCTCCCATTGAGGGC--ACTAGG-CA  1087

seq1  TCTTCTGCTACATATGCT  1116
      ||||||||||| ||||||
seq2  TCTTCTGCTAC-TATGCT  1104

seq1: chr4_13009839_13010864
seq2: B6Ng01-032O22.g_69_1087 (reverse)

seq1  TCATTGCTGCAATCATGAGCAAGACAATGCTATACATAGTGTCTCTTCCA  50
      |||||||||| |||| ||  |||||||||||||||||||||| |||||||
seq2  TCATTGCTGC-ATCA-GACGAAGACAATGCTATACATAGTGTTTCTTCCA  48

seq1  TGGTAGATTCATTAGTTGTCCCCAGTCTTTATTCCCCTTTGCATCGATAT  100
      ||||||| ||||||| ||||||||||||||||||||| ||||||||||||
seq2  TGGTAGA-TCATTAG-TGTCCCCAGTCTTTATTCCCC-TTGCATCGATAT  95

seq1  CCAGAACTGGATATATTACTTGTTGAATCTAGTATAGACTGAAACTGAGG  150
      |||||||||||||||||||||  || ||||||||||||||||||||||||
seq2  CCAGAACTGGATATATTACTTAGTG-ATCTAGTATAGACTGAAACTGAGG  144

seq1  AGTTATCAATTTAAGAAACTTTAAACATTTCAAGATTGAAATATGTTTTT  200
      ||||||||||||||| ||||||||||||||||||| ||||||||||||||
seq2  AGTTATCAATTTAAG-AACTTTAAACATTTCAAGA-TGAAATATGTTTTT  192

seq1  CTTATTGCCACAAACATTTACACACTAATTCACAAACCT-AATTGGCATG  249
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CTTATTGCCACAAACATTTACACACTAATTCACAAACCTAAATTGGCATG  242

seq1  TATTTGGCCTTCACTATGCCATTTCACAGTATCTTCTGGATGTGAAGTAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGGCCTTCACTATGCCATTTCACAGTATCTTCTGGATGTGAAGTAT  292

seq1  ATACCCCTATCCAACTGATTTTAAGTTTGAACATGGCGTTGCCTTTGGCC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCCCTATCCAACTGATTTTAAGTTTGAACATGGCGTTGCCTTTGGCC  342

seq1  ACTAAACTATGTACACAATTGATGTATACCAGCTCTATCTTGGCCTTACA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAACTATGTACACAATTGATGTATACCAGCTCTATCTTGGCCTTACA  392

seq1  ACTATCAGTTGCCCCTGTTTGATCCTCTTATTGCCATAGTTGTATAAAGT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATCAGTTGCCCCTGTTTGATCCTCTTATTGCCATAGTTGTATAAAGT  442

seq1  TCATATCCACATCTCAATTTACCCATGGGACCAGGGACGTTTCAGTCTGC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATCCACATCTCAATTTACCCATGGGACCAGGGACGTTTCAGTCTGC  492

seq1  AAAATAAAGTTAATTGAAGCAGCGTCCAATCCACATCAACTAGTTCCAGT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAAGTTAATTGAAGCAGCGTCCAATCCACATCAACTAGTTCCAGT  542

seq1  CAAGTTTCAGACACAGGAGTGAAAAAAAATTGATATTTGAGCATTGAAGT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTTCAGACACAGGAGTGAAAAAAAATTGATATTTGAGCATTGAAGT  592

seq1  GTCTTGTGAAATAGCAAAAGGCAAGCAATGCACTAAATTCAGTCATAGTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTGTGAAATAGCAAAAGGCAAGCAATGCACTAAATTCAGTCATAGTT  642

seq1  TATCTACGGGACTGTAGCAGCCAATACTGTAATTGGCTGCTCCTTTCAAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTACGGGACTGTAGCAGCCAATACTGTAATTGGCTGCTCCTTTCAAA  692

seq1  CATCTCTCTGACCAGCCAGATCATAGCCTCATTAGTCAACATACTAGGAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCTCTGACCAGCCAGATCATAGCCTCATTAGTCAACATACTAGGAT  742

seq1  CCTGATTTGTCACCTGCTATCATCCTGTCCCCTTCACCCATACTATAAAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATTTGTCACCTGCTATCATCCTGTCCCCTTCACCCATACTATAAAC  792

seq1  TCTCCACATTTCATTGCATGCTTGTTTATAACAAAGGTTTTGTCTTTCTA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCACATTTCATTGCATGCTTGTTTATAACAAAGGTTTTGTCTTTCTA  842

seq1  GTTCTAATAATGTCATTTGAGAGAAAAAAGAATCAGTAATTTCGATACAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTAATAATGTCATTTGAGAGAAAAAAGAATCAGTAATTTCGATACAG  892

seq1  TTTCTTATTTTCCTTTCTAGCTAGTTTTCTGCTCTCTATGTTGGGTGAAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTATTTTCCTTTCTAGCTAGTTTTCTGCTCTCTATGTTGGGTGAAT  942

seq1  TTTGGAATGTCTTCCATTAGAAAACCATAATAAACCTTGAAAAGCATTAT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAATGTCTTCCATTAGAAAACCATAATAAACCTTGAAAAGCATTAT  992

seq1  GTGTTCTTATCACACTGATTTGAATTC  1026
      |||||||||||||||||||||||||||
seq2  GTGTTCTTATCACACTGATTTGAATTC  1019