BAC Information

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BAC

Clone NameB6Ng01-034A23
Chromosome4 (Build37)
Map Location 8,500,500 - 8,501,070
singlet/doubletsinglet
Overlap geneRab2
Upstream geneCar8, LOC100039494, LOC100039505, LOC100039478
Downstream geneEG666752, LOC666760, Chd7, LOC666782, LOC100039584, 4933402J24Rik, Asph
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-034A23.bB6Ng01-034A23.g
ACCDH862930DH862931
length277579
definitionDH862930|Mus musculus domesticus DNA, BAC clone: B6Ng01-034A23, 5' end.DH862931|Mus musculus domesticus DNA, BAC clone: B6Ng01-034A23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
acacagaaagaaaccctgatgttagaatacctaagagagaacaagactca
tagatgcaatatgaacgaaccagtaccccccagagctccttggaactata
ctaccaatcaaagaaaacacatggtggaacttttgtctctagctatatat
gtagcagaggatggcctagtcagtcatcaatgggaggagaggcccttagt
cctgtgaagactctatgcccatgccaggaccaggaatcacagtgggtggg
ttgaggagcatagagaggggggaaggg
gaattctcttcagagccaaggtgggaaactacagcaacggcccctggggc
ggggacaggggaggggcgagggggcttgagacccagtggcggccccttta
tgagctgatgccaaagccctctcctcggccggccgccgtggatccctctg
cctgggaggaagagccccaagctctgggcttgccaagcgccttactgtcc
cagagcccggggaggcacgggggtaggggtgggaagcgggcggtgccagc
gggatgggtccgccagagcgcagggtgggcccagggtgaggggcaggtcg
ggaggttcaggattggtgggcctgggaaggagggagggtcgcccctatga
gtacccttcaagctgatgcaggcgacagccccaattttaattttttaata
aagtactctttgtactaataacccattaaacgctaaagctttttatactg
gcccgttttaagcctgtagggggtttgaaagctgctgcattatggtattc
actgtaactttcacctctatgcatctaaaaaaaattcactaaaacaattt
tttaaaatatgaaatataggtttactgat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_8500500_8501070
seq2: B6Ng01-034A23.g_71_648 (reverse)

seq1  TCAGT-AACCTATTTTTCCTATTTT-AAAAATTGTTTTAGTGAA-TTTTT  47
      ||||| ||||||| |||| |||||| |||||||||||||||||| |||||
seq2  TCAGTAAACCTATATTTCATATTTTAAAAAATTGTTTTAGTGAATTTTTT  50

seq1  TTAGATGCATAGAGGTG-AAGTTACAGTGAATACCATAATGCAGCAGCTT  96
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TTAGATGCATAGAGGTGAAAGTTACAGTGAATACCATAATGCAGCAGCTT  100

seq1  TCAAACCCCCTACAGGCTTAAAACGGGCCAGT-TTAAGAGCTTTAGCGTT  145
      |||||||||||||||||||||||||||||||| | || ||||||||||||
seq2  TCAAACCCCCTACAGGCTTAAAACGGGCCAGTATAAAAAGCTTTAGCGTT  150

seq1  T-ATGGGTTATTAGTACAAAGAGTACTTTATT-AAAAATTAAAATTGGGG  193
      | |||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TAATGGGTTATTAGTACAAAGAGTACTTTATTAAAAAATTAAAATTGGGG  200

seq1  CTGTCGCCTGCATCAGCTTGTAGGGTACTCATAGGGGCGACCCTCCCTCC  243
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CTGTCGCCTGCATCAGCTTGAAGGGTACTCATAGGGGCGACCCTCCCTCC  250

seq1  TTCCCAGGCCCACCAATCCTGAACCTCCCGACCTGCCCCTCACCCTGGGC  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCAGGCCCACCAATCCTGAACCTCCCGACCTGCCCCTCACCCTGGGC  300

seq1  CCACCCTGCGCTCTGGCGGACCCATCCCGCTGGCACCGCCCGCTTCCCAC  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCTGCGCTCTGGCGGACCCATCCCGCTGGCACCGCCCGCTTCCCAC  350

seq1  CCCTACCCCCGTGCCTCCCCGGGCTCTGGGACAGTAAGGCGCTTGGCAAG  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTACCCCCGTGCCTCCCCGGGCTCTGGGACAGTAAGGCGCTTGGCAAG  400

seq1  CCCAGAGCTTGGGGCTCTTCCTCCCAGGCAGAGGGATCCACGGCGGCCGG  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGAGCTTGGGGCTCTTCCTCCCAGGCAGAGGGATCCACGGCGGCCGG  450

seq1  CCGAGGAGAGGGCTTTGGCATCAGCTCATAAAGGGGCCGCCACTGGGTCT  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAGGAGAGGGCTTTGGCATCAGCTCATAAAGGGGCCGCCACTGGGTCT  500

seq1  CAAGCCCCCTCGCCCCTCCCCTGTCCCCGCCCCAGGGGCCGTTGCTGTAG  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCCCCTCGCCCCTCCCCTGTCCCCGCCCCAGGGGCCGTTGCTGTAG  550

seq1  TTTCCCACCTTGGCTCTGAAGAGAATTC  571
      ||||||||||||||||||||||||||||
seq2  TTTCCCACCTTGGCTCTGAAGAGAATTC  578