BAC Information

Click to search

BAC

Clone NameB6Ng01-034H16
Chromosome4 (Build37)
Map Location 105,027,866 - 105,028,479
singlet/doubletsinglet
Overlap genenone
Upstream geneDab1, C8b, C8a, 1700024P16Rik, Prkaa2, LOC100039513, Ppap2b
Downstream geneLOC433742, LOC665518, LOC434381, Ppia-ps4_954.1, Map1lc3, LOC384039, Usp24
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-034H16.bB6Ng01-034H16.g
ACCDH863222DH863223
length269618
definitionDH863222|Mus musculus domesticus DNA, BAC clone: B6Ng01-034H16, 5' end.DH863223|Mus musculus domesticus DNA, BAC clone: B6Ng01-034H16, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tttgatcgtctggtataaagctgtgttcgttttcagtcaacttgtcataa
ggtagggtcatctaagaagcaggaacttcagttgagaaaatgcccccatc
agattactctatgggtaaacctgggggagaatgattagtgattgatgagg
ggtagggggagctcactgtgggcagtgccattcctgggtaagtgatactg
ggttgtgtaagaaagcaggctgatcaagccatgggaagcgagccagtgag
attggttcctccaccgtct
gaattctgaagaaaatgagttgatggttctgcccagatctgactttggtg
gacttcactggaagttcaggggtcagttcttggacaaataagctggcact
tgctcatagagaactacactgctttgggctgcaggatgagggaagggagt
gaggaagtgggtttatcggtgaagtatggcagatacaactagatatacct
tgctgctgccacactcattacagaagaaacaccaaaaaacaggcagagac
agagacagtctacctcactccctttatatattacactatgtaccgtctta
cgacatactcagaggcaatagggatcctaggccagatttaggtgggctgc
ctaaggccaccagacaggaactagcagagctggaccagcttttgcctgtc
caaggccagcttccatgcactttgtcatttccatacctgtgtgtttgatg
taaatgtgggattaaacagaccagatcatctccacagggcctttggctct
tcagccttttctcaaaagcttcagccttctgttcctcctaattctctctg
cctccttctcagaaatgactctgcccccactgtagctcagacccttttcc
taatgggggggggggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_105027866_105028479
seq2: B6Ng01-034H16.g_66_683 (reverse)

seq1  CCCCCCCCCCCCCCATTAGG-AAAGGGTCTGAGCTACAGTGGGGGCAGAG  49
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CCCCCCCCCCCCCCATTAGGAAAAGGGTCTGAGCTACAGTGGGGGCAGAG  50

seq1  TCATTTCTGAGAAGGAGGCAGAGAGAATTAGGAGGAACAGAAGGCTGAAG  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTCTGAGAAGGAGGCAGAGAGAATTAGGAGGAACAGAAGGCTGAAG  100

seq1  C-TTTGAGAAAAGGCTGAAGAGCCAAAGGCCCTGTGGAGATGATCTGGTC  148
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGAGAAAAGGCTGAAGAGCCAAAGGCCCTGTGGAGATGATCTGGTC  150

seq1  TGTTTAATCCCACATTTACATCAAACACACAGGTATGGAAATGAC-AAGT  197
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TGTTTAATCCCACATTTACATCAAACACACAGGTATGGAAATGACAAAGT  200

seq1  GCATGGAAGCTGGCCTTGGACAGGC-AAAGCTGGTCCAGCTCTGCTAGTT  246
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GCATGGAAGCTGGCCTTGGACAGGCAAAAGCTGGTCCAGCTCTGCTAGTT  250

seq1  CCTGTCTGGTGGCCTTAGGCAGCCCACCTAAATCTGGCCTAGGATCCCTA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCTGGTGGCCTTAGGCAGCCCACCTAAATCTGGCCTAGGATCCCTA  300

seq1  TTGCCTCTGAGTATGTCGTAAGACGGTACATAGTGTAATATATAAAGGGA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTCTGAGTATGTCGTAAGACGGTACATAGTGTAATATATAAAGGGA  350

seq1  GTGAGGTAGACTGTCTCTGTCTCTGCCTGTTTTTTGGTGTTTCTTCTGTA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGGTAGACTGTCTCTGTCTCTGCCTGTTTTTTGGTGTTTCTTCTGTA  400

seq1  ATGAGTGTGGCAGCAGCAAGGTATATCTAGTTGTATCTGCCATACTTCAC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGTGTGGCAGCAGCAAGGTATATCTAGTTGTATCTGCCATACTTCAC  450

seq1  CGATAAACCCACTTCCTCACTCCCTTCCCTCATCCTGCAGCCCAAAGCAG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATAAACCCACTTCCTCACTCCCTTCCCTCATCCTGCAGCCCAAAGCAG  500

seq1  TGTAGTTCTCTATGAGCAAGTGCCAGCTTATTTGTCCAAGAACTGACCCC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTTCTCTATGAGCAAGTGCCAGCTTATTTGTCCAAGAACTGACCCC  550

seq1  TGAACTTCCAGTGAAGTCCACCAAAGTCAGATCTGGGCAGAACCATCAAC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTTCCAGTGAAGTCCACCAAAGTCAGATCTGGGCAGAACCATCAAC  600

seq1  TCATTTTCTTCAGAATTC  614
      ||||||||||||||||||
seq2  TCATTTTCTTCAGAATTC  618