BAC Information

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BAC

Clone NameB6Ng01-034O07
Chromosome4 (Build37)
Map Location 30,172,421 - 30,173,484
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC665185, LOC619906, LOC100040864
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-034O07.bB6Ng01-034O07.g
ACCDH863512DH863513
length1,043906
definitionDH863512|Mus musculus domesticus DNA, BAC clone: B6Ng01-034O07, 5' end.DH863513|Mus musculus domesticus DNA, BAC clone: B6Ng01-034O07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctcccattttcataatattaaaagtaaagaatgaaataatatta
aaagtaattcaaagctttggtggagcataaagccaaattggaagaaacat
ttcggttatgattattttgaatttcagcaacaagtattggaatattttat
ataatacttttttcttgatattgatgtgtcattaatatgttttcctcaaa
gtatgtttgaaattcactaggttttacaatggcatgataattacttggaa
aataagaagcaggttgcaaagatactaataaatctttagaaaaactattt
atgatgtcaacacatgaatctaatcatatggttagtgttgatcccaaaag
taaatctccatttctgtcatagtctgagtgttaatattgaacacacaaag
cctagttccactttcaatatttaattgaaagtcaaagtatgtcttccatc
tgcatggagaaaatgaatagatttaggaacatacatgcttacatctggtc
ttcaaatactaacagaggaatttcctaacaaacataaagtatgtaattct
ttaataagaacttattgtgatttatttattaatttttaaaaattttattg
ctcctattagtttaagacagaagactttgttatatgttatatatgtgttt
ttccaaattttgattgaacaccactgaattttggaatggaaagtatacct
taattataatcttgtttgctacttcgtcttattttttgtcgtacaaactt
attcttttctttaatagtaaacattttaaatgttttcaagtctatgtatg
tgcagcatgtgttgcctggtgcttgcagagctgagaaggcattgtatccc
ctgagccttgtgttatggaatattgtgagccatatgtgggtgatgagaat
gagacagggccttgccaacagcagcagtgctctttactgtgtgctattac
tcagcccttcaagtctttaaatcagctttttggatcattgcaaatatcat
acactttggtatgttgcaatgagtgtcaaacgtcaaggaaaaa

gaattctgaaagagacagacagtggaggcctggatccgtgctttcagagg
agattcatactcaaatcagaatggaactagaagccattcatgctatacta
tgggaagaatatgtatgagtttccctgtgtcttcaaaccccatccatgag
tgaacttagcatagtaaacaaacttatgagcttgtttaatatagggaatg
tcaagacaggatacttttcaaattgagacatggatgctgttctctgttgc
cataaatctcttcacaaatatgccctggcaaatgaaaacacaacacagtt
aatatgattacatgctgtgtacctagactgggcagatctacggctacact
accatcttccacagcctatgagaccccttagaacttgcagtttctccagg
ccatgtgcttctgctctgattttctccttcttcctcctcttctgtgtcct
ctccctcttccattttatcctccttctctccttttcttttctctttcctc
tccttttctctttcctttcctttcactccaccttcccttttatctgccca
atcatcagctctcctttattttacaaattaagatgggaagcaggtttaca
ggaaatcacctgagtgctgactcattctttgttcacaaccactcacagga
gaaaggaattaacatcaaatataattcgccccaggctattaataacagtt
ctctaccactattcaagagccagaaacacagtgcaaaaaaataagaaaaa
gaaagtataaatacgtcatatggaaagaaataaaggtagttaattttgaa
aatgatattaagaaagtggctgcaagatcatatgccccagtacagggtat
gccagggacaggaagcaggagtgggtgggttggggagcagggcaagggga
gggcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_30172421_30173484
seq2: B6Ng01-034O07.b_45_1087 (reverse)

seq1  TTTTATCCTTGACGATTTTGACAAACTCATTGCAACATTACCAAAAGTTG  50
       ||| |||||||||  ||||||  ||||||||||||| |||||||   ||
seq2  -TTTTTCCTTGACG--TTTGAC--ACTCATTGCAACA-TACCAAA--GTG  42

seq1  TATGATATTTGCATAGAATCCAAAAAGGCTGAATTAAAAAGACTTGAAAA  100
      ||||||||||||| |  ||||||||| ||||| ||  |||||||||  ||
seq2  TATGATATTTGCA-ATGATCCAAAAA-GCTGATTT--AAAGACTTG--AA  86

seq1  GGGCTGGAGTAATAGCACACAGGTAAAGAGCACTTGCTGCTGTTGGCAAG  150
      ||||| ||||||||||||||| ||||||||||| ||||||||||||||||
seq2  GGGCT-GAGTAATAGCACACA-GTAAAGAGCAC-TGCTGCTGTTGGCAAG  133

seq1  GCCCTGTTCTCATTCCTCATCACCCACATATGGCTCACAATATTCCATAA  200
      |||||| ||||||| |||||||||||||||||||||||||||||||||||
seq2  GCCCTG-TCTCATT-CTCATCACCCACATATGGCTCACAATATTCCATAA  181

seq1  CACAAGGCTCAGGGGATACAATGCCCTTCTCAGCTCTGCAAGCACCAGGC  250
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  CACAAGGCTCAGGGGATACAATG-CCTTCTCAGCTCTGCAAGCACCAGGC  230

seq1  AACACATGCTGCACATACATAGACTTGAAAACATTTTAAAATGTTTACTA  300
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  AACACATGCTGCACATACATAGACTTGAAAACA-TTTAAAATGTTTACTA  279

seq1  TTAAAGAAAAGAATAAGTTTGTACGACAAAAAATAAGACGAAGTAGCAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGAAAAGAATAAGTTTGTACGACAAAAAATAAGACGAAGTAGCAAA  329

seq1  CAAGATTATAATTAAGGTATACTTTCCATTCCAAAATTCAGTGGTGTTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATTATAATTAAGGTATACTTTCCATTCCAAAATTCAGTGGTGTTCA  379

seq1  ATCAAAATTTGGAAAAACACATATATAACATATAACAAAGTCTTCTGTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAAATTTGGAAAAACACATATATAACATATAACAAAGTCTTCTGTCT  429

seq1  TAAACTAATAGGAGCAATAAAATTTTTAAAAATTAATAAATAAATCACAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTAATAGGAGCAATAAAATTTTTAAAAATTAATAAATAAATCACAA  479

seq1  TAAGTTCTTATTAAAGAATTACATACTTTATGTTTGTTAGGAAATTCCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTCTTATTAAAGAATTACATACTTTATGTTTGTTAGGAAATTCCTC  529

seq1  TGTTAGTATTTGAAGACCAGATGTAAGCATGTATGTTCCTAAATCTATTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAGTATTTGAAGACCAGATGTAAGCATGTATGTTCCTAAATCTATTC  579

seq1  ATTTTCTCCATGCAGATGGAAGACATACTTTGACTTTCAATTAAATATTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCTCCATGCAGATGGAAGACATACTTTGACTTTCAATTAAATATTG  629

seq1  AAAGTGGAACTAGGCTTTGTGTGTTCAATATTAACACTCAGACTATGACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGGAACTAGGCTTTGTGTGTTCAATATTAACACTCAGACTATGACA  679

seq1  GAAATGGAGATTTACTTTTGGGATCAACACTAACCATATGATTAGATTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGGAGATTTACTTTTGGGATCAACACTAACCATATGATTAGATTCA  729

seq1  TGTGTTGACATCATAAATAGTTTTTCTAAAGATTTATTAGTATCTTTGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTGACATCATAAATAGTTTTTCTAAAGATTTATTAGTATCTTTGCA  779

seq1  ACCTGCTTCTTATTTTCCAAGTAATTATCATGCCATTGTAAAACCTAGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGCTTCTTATTTTCCAAGTAATTATCATGCCATTGTAAAACCTAGTG  829

seq1  AATTTCAAACATACTTTGAGGAAAACATATTAATGACACATCAATATCAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCAAACATACTTTGAGGAAAACATATTAATGACACATCAATATCAA  879

seq1  GAAAAAAGTATTATATAAAATATTCCAATACTTGTTGCTGAAATTCAAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAAGTATTATATAAAATATTCCAATACTTGTTGCTGAAATTCAAAA  929

seq1  TAATCATAACCGAAATGTTTCTTCCAATTTGGCTTTATGCTCCACCAAAG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCATAACCGAAATGTTTCTTCCAATTTGGCTTTATGCTCCACCAAAG  979

seq1  CTTTGAATTACTTTTAATATTATTTCATTCTTTACTTTTAATATTATGAA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAATTACTTTTAATATTATTTCATTCTTTACTTTTAATATTATGAA  1029

seq1  AATGGGAGGAATTC  1064
      ||||||||||||||
seq2  AATGGGAGGAATTC  1043


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