BAC Information

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BAC

Clone NameB6Ng01-035P03
Chromosome4 (Build37)
Map Location 137,421,011 - 137,546,032
singlet/doubletdoublet
Overlap geneEce1
Upstream geneC1qb, C1qc, C1qa, Epha8, Zbtb40, Wnt4, Cdc42, LOC665533, LOC242711, Ela3, 1700013G24Rik, Hspg2, Ldlrad2, Usp48, Rap1gap, Akp2
Downstream geneLOC100040558, Eif4g3, Hp1bp3, Kif17, Ddost, Pink1, Cda, LOC625638, LOC625646, 0610009K11Rik, Camk2n1, LOC100040618, 4931403E03Rik, Ubxd3, Pla2g2c, Pla2g2f, Pla2g2d, Pla2g5, Pla2g2a, Pla2g2e, Otud3, Rnf186, Tmco4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-035P03.bB6Ng01-035P03.g
ACCDH864277DH864278
length787942
definitionDH864277|Mus musculus domesticus DNA, BAC clone: B6Ng01-035P03, 5' end.DH864278|Mus musculus domesticus DNA, BAC clone: B6Ng01-035P03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(137,545,247 - 137,546,032)(137,421,011 - 137,421,963)
sequence
gaattcacagtattcaattcatgaaaggctcttatttttattaaatagtg
gggaaggaggagttatgtgtttatgaatgctgatacccacggagaccaga
agaagagaccaactcccctggtgctggagttaacaggctttcgtgaagcc
accttaccttagtgctgggaattgaactcagggcttctgagttcataagc
tgtacacactctctaccacggagcagtctctccagcccctagagaacatt
tttaatctccgtgagcctaagttttcctcctctgtgaaacccgctccacc
tcctggggtttggggaataacagggaacacttacccagggattccctggc
acacagtaattttttttggtacactttacccattatgattcatttctgca
gagacatttcattgccctttaaaaatccctctgatgtggcaagcactcag
atgggctatgaaatttgaatgacttaattgtaaattgccagaggatttta
tgttaccccacaggaatccagacaacccaaggcctcaccacatagagagc
agggccagaatatcctagaacacgcacagcgcatgcccatgaggagtgcg
gtcgctttgggcggctgtctgctatacccagagcccacagcaacctgtgg
caaaaacctgaattccctatgagctgaaagtacactcatggatactctca
ggcattgctacattgctgctggagtaagtgtgaactggtactgggctcag
agggcccttacatttcttttgctttttctcttctctc
gaattcagggctacttccactctgaatcttaaatccagcttcccacccca
ccaacagagagcccacgctttccctctgtcccccagatccctaatggggt
tccttgctccgagcaggctgtttcctgttgttggcgctggatctccctgg
tactcccagctctccctccacccaggtccctaacctcttggcagaaaatc
agcaatattcttaatggcctcctgtcggaagccccccttcccatactcct
ccctctgtctgtccgccctcagcgcaagctgtaggatgaaggctcccaag
aggctttttatatctcctacctccagctgtcctcaaaccacccagcagca
ggcacagagatgggacggaggtgctcctggggcacagagctaggcggtgg
ggagaaggcatgagctgccagatgctaggcggactaaccaggcagagggg
ctgagggggagacagctcaaactcccacattgttctggttacggtatttt
gggagttagtccttcacattccgcactggggagggtgacagcgtttgggt
cactgctaaatggagggatatcgtcactggatggaggttgaagaccagac
ccaggacccaaattgaaatcctggtgtcccgtgagtttgctgtgtgactt
taggtcagcatcctccctctctgtgcttccttttttatcgtgtggataga
aagacgttttctggttttgaggatgtaattgtgagggtaccggcatagaa
acatgcagaacgttattaaaacaccaggacagcgttattattgagacagg
aggtgaggcgttcttgagagttatgtgacaccaccttgcctgggccaggc
ggggcttgtcctggaaactgggtttaactggatattccctgtgtctacgt
gtctacgtttggtcatgatgagtagcacgcagtatgtttgct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_137545247_137546032
seq2: B6Ng01-035P03.b_44_826 (reverse)

seq1  GAAGAGAAAAAAGCAAAAAGAAATGTAAGGGCCCTCTGAGCCCAGTACCA  50
      |||||| ||||||| |||||||||||||||||||||||||||||||||||
seq2  GAAGAG-AAAAAGC-AAAAGAAATGTAAGGGCCCTCTGAGCCCAGTACCA  48

seq1  GTTCACACTTACTCCAGCAGCAATGTAGCAATGCCCTGAGAGTATCCATG  100
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  GTTCACACTTACTCCAGCAGCAATGTAGCAATG-CCTGAGAGTATCCATG  97

seq1  AGTGTACTTTCAGCTCATAGGGAATTCAGGTTTTTGCCACAGGTTGCTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTACTTTCAGCTCATAGGGAATTCAGGTTTTTGCCACAGGTTGCTGT  147

seq1  GGGCTCTGGGTATAGCAGACAGCCGCCCAAAGCGACCGCACTCCTCATGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTCTGGGTATAGCAGACAGCCGCCCAAAGCGACCGCACTCCTCATGG  197

seq1  GCATGCGCTGTGCGTGTTCTAGGATATTCTGGCCCTGCTCTCTATGTGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGCGCTGTGCGTGTTCTAGGATATTCTGGCCCTGCTCTCTATGTGGT  247

seq1  GAGGCCTTGGGTTGTCTGGATTCCTGTGGGGTAACATAAAATCCTCTGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCCTTGGGTTGTCTGGATTCCTGTGGGGTAACATAAAATCCTCTGGC  297

seq1  AATTTACAATTAAGTCATTCAAATTTCATAGCCCATCTGAGTGCTTGCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTACAATTAAGTCATTCAAATTTCATAGCCCATCTGAGTGCTTGCCA  347

seq1  CATCAGAGGGATTTTTAAAGGGCAATGAAATGTCTCTGCAGAAATGAATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGAGGGATTTTTAAAGGGCAATGAAATGTCTCTGCAGAAATGAATC  397

seq1  ATAATGGGTAAAGTGTACCAAAAAAAATTACTGTGTGCCAGGGAATCCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGGGTAAAGTGTACCAAAAAAAATTACTGTGTGCCAGGGAATCCCT  447

seq1  GGGTAAGTGTTCCCTGTTATTCCCCAAACCCCAGGAGGTGGAGCGGGTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAAGTGTTCCCTGTTATTCCCCAAACCCCAGGAGGTGGAGCGGGTTT  497

seq1  CACAGAGGAGGAAAACTTAGGCTCACGGAGATTAAAAATGTTCTCTAGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAGGAGGAAAACTTAGGCTCACGGAGATTAAAAATGTTCTCTAGGG  547

seq1  GCTGGAGAGACTGCTCCGTGGTAGAGAGTGTGTACAGCTTATGAACTCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGAGAGACTGCTCCGTGGTAGAGAGTGTGTACAGCTTATGAACTCAG  597

seq1  AAGCCCTGAGTTCAATTCCCAGCACTAAGGTAAGGTGGCTTCACGAAAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCCTGAGTTCAATTCCCAGCACTAAGGTAAGGTGGCTTCACGAAAGC  647

seq1  CTGTTAACTCCAGCACCAGGGGAGTTGGTCTCTTCTTCTGGTCTCCGTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTAACTCCAGCACCAGGGGAGTTGGTCTCTTCTTCTGGTCTCCGTGG  697

seq1  GTATCAGCATTCATAAACACATAACTCCTCCTTCCCCACTATTTAATAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCAGCATTCATAAACACATAACTCCTCCTTCCCCACTATTTAATAAA  747

seq1  AATAAGAGCCTTTCATGAATTGAATACTGTGAATTC  786
      ||||||||||||||||||||||||||||||||||||
seq2  AATAAGAGCCTTTCATGAATTGAATACTGTGAATTC  783

seq1: chr4_137421011_137421963
seq2: B6Ng01-035P03.g_68_1009

seq1  GAATTCAGGGCTACTTCCACTCTGAATCTTAAATCCAGCTTCCCACCCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGGCTACTTCCACTCTGAATCTTAAATCCAGCTTCCCACCCCA  50

seq1  CCAACAGAGAGCCCACGCTTTCCCTCTGTCCCCCAGATCCCTAATGGGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACAGAGAGCCCACGCTTTCCCTCTGTCCCCCAGATCCCTAATGGGGT  100

seq1  TCCTTGCTCCGAGCAGGCTGTTTCCTGTTGTTGGCGCTGGATCTCCCTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGCTCCGAGCAGGCTGTTTCCTGTTGTTGGCGCTGGATCTCCCTGG  150

seq1  TACTCCCAGCTCTCCCTCCACCCAGGTCCCTAACCTCTTGGCAGAAAATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCCCAGCTCTCCCTCCACCCAGGTCCCTAACCTCTTGGCAGAAAATC  200

seq1  AGCAATATTCTTAATGGCCTCCTGTCGGAAGCCCCCCTTCCCATACTCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATATTCTTAATGGCCTCCTGTCGGAAGCCCCCCTTCCCATACTCCT  250

seq1  CCCTCTGTCTGTCCGCCCTCAGCGCAAGCTGTAGGATGAAGGCTCCCAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTGTCTGTCCGCCCTCAGCGCAAGCTGTAGGATGAAGGCTCCCAAG  300

seq1  AGGCTTTTTATATCTCCTACCTCCAGCTGTCCTCAAACCACCCAGCAGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTTTTATATCTCCTACCTCCAGCTGTCCTCAAACCACCCAGCAGCA  350

seq1  GGCACAGAGATGGGACGGAGGTGCTCCTGGGGCACAGAGCTAGGCGGTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACAGAGATGGGACGGAGGTGCTCCTGGGGCACAGAGCTAGGCGGTGG  400

seq1  GGAGAAGGCATGAGCTGCCAGATGCTAGGCGGACTAACCAGGCAGAGGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAAGGCATGAGCTGCCAGATGCTAGGCGGACTAACCAGGCAGAGGGG  450

seq1  CTGAGGGGGAGACAGCTCAAACTCCCACATTGTTCTGGTTACGGTATTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGGGGAGACAGCTCAAACTCCCACATTGTTCTGGTTACGGTATTTT  500

seq1  GGGAGTTAGTCCTTCACATTCCGCACTGGGGAGGGTGACAGCGTTTGGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGTTAGTCCTTCACATTCCGCACTGGGGAGGGTGACAGCGTTTGGGT  550

seq1  CACTGCTAAATGGAGGGATATCGTCACTGGATGGAGGTTGAAGACCAGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCTAAATGGAGGGATATCGTCACTGGATGGAGGTTGAAGACCAGAC  600

seq1  CCAGGACCCAAATTGAAATCCTGGTGTCCCGTGAGTTTGCTGTGTGACTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGACCCAAATTGAAATCCTGGTGTCCCGTGAGTTTGCTGTGTGACTT  650

seq1  TAGGTCAGGCATCCTCCCTCTCTGTGCTTCCTTTTTTATCGTGTGGGATA  700
      ||||||| |||||||||||||||||||||||||||||||||||| |||| 
seq2  TAGGTCA-GCATCCTCCCTCTCTGTGCTTCCTTTTTTATCGTGT-GGAT-  697

seq1  AGAAAGACGTTTTCTGGTTTTGAGGATGTAATTGTGAGGGTACCGGCATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGACGTTTTCTGGTTTTGAGGATGTAATTGTGAGGGTACCGGCATA  747

seq1  GAAACATGCAAGAACGTTATTAAAAACACAAGGGACAGCGTTATTATTTG  800
      ||||||||| ||||||||||| ||||||| | ||||||||||||||||  
seq2  GAAACATGC-AGAACGTTATT-AAAACACCA-GGACAGCGTTATTATT--  792

seq1  AAGACAGGAGGTGAGGCGTTC-TGAGAGTATGGTGACAACCACCTTGCCC  849
       |||||||||||||||||||| |||||||   ||||| ||||||||||| 
seq2  GAGACAGGAGGTGAGGCGTTCTTGAGAGTTATGTGAC-ACCACCTTGCCT  841

seq1  TGGGCAAGCGGGGC-TGTCCTGGAAACTGGGTTTTACTGGATATTCCCTG  898
       || || ||||||| ||||||||||||||||||| |||||||||||||||
seq2  GGGCCAGGCGGGGCTTGTCCTGGAAACTGGGTTTAACTGGATATTCCCTG  891

seq1  TGTCTACGTGTCTACGTTTGTTCATGGATGAGTAGCCACGCAGTAATGGT  948
      |||||||||||||||||||| |||| ||||||||| |||||||||   ||
seq2  TGTCTACGTGTCTACGTTTGGTCAT-GATGAGTAG-CACGCAGTA--TGT  937

seq1  TTGCT  953
      |||||
seq2  TTGCT  942