BAC Information

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BAC

Clone NameB6Ng01-036G20
Chromosome4 (Build37)
Map Location 85,973,295 - 86,126,051
singlet/doubletdoublet
Overlap geneAdamtsl1, 4930500O09Rik
Upstream geneSh3gl2, A930009N24, LOC668052
Downstream geneRraga, 6230416J20Rik, LOC100040388, Adfp, EG624685, Dennd4c, Rps6, Asah3l, Slc24a2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-036G20.bB6Ng01-036G20.g
ACCDH864606DH864607
length167521
definitionDH864606|Mus musculus domesticus DNA, BAC clone: B6Ng01-036G20, 5' end.DH864607|Mus musculus domesticus DNA, BAC clone: B6Ng01-036G20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(85,973,295 - 85,973,461)(86,125,525 - 86,126,051)
sequence
gaattccctctaagaaatgtgtttaccagtcccagacaccaaggcataga
aaccttcctggtcattgttcagccaaccacaatctgctcaaaagtcagca
ggctgagcacttaatcttcagtaggaccatgcctttgttgttggtggtgg
tttggtttggtttttgt
tctcccttccattgacagagctgttttctcaagtacctttaaggggaaaa
ctctgcttttcccttgtcctgtttggctaaatgggattcaggaagaagca
gttagtctttggaggaactggtcttatggagaaataagcagtagagactg
ttgcagtgggcaggaatgcccggctcagctgggtatagccggcatgatgg
gcaggtgccacctgggcctgtcacagatgtgcaatgatttgggaagggat
tactttggcgaacagtgttctgtcttttccgtcttactgttttgttcctc
tttcacataatgggggcactgacagtagatagcaaagaagtgaagacttt
gtgcctcgatgacattttttctcttctgggttttctgtaaggctgagtag
aggcgataaatattagtagaagaagtttctgagaacacagagaaaggtga
gtgtatctgagaaacgggtgctaaccgatgccagccccacatgaggggtt
ggatggaagatgggtaggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_85973295_85973461
seq2: B6Ng01-036G20.b_42_208

seq1  GAATTCCCTCTAAGAAATGTGTTTACCAGTCCCAGACACCAAGGCATAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTCTAAGAAATGTGTTTACCAGTCCCAGACACCAAGGCATAGA  50

seq1  AACCTTCCTGGTCATTGTTCAGCCAACCACAATCTGCTCAAAAGTCAGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTCCTGGTCATTGTTCAGCCAACCACAATCTGCTCAAAAGTCAGCA  100

seq1  GGCTGAGCACTTAATCTTCAGTAGGACCATGCCTTTGTTGTTGGTGGTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGAGCACTTAATCTTCAGTAGGACCATGCCTTTGTTGTTGGTGGTGG  150

seq1  TTTGGTTTGGTTTTTGT  167
      |||||||||||||||||
seq2  TTTGGTTTGGTTTTTGT  167

seq1: chr4_86125525_86126051
seq2: B6Ng01-036G20.g_68_594 (reverse)

seq1  CCTCCTACCCATCTTCCATCCAACCCCTCATGTGGGGCTGGCATCGGTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTACCCATCTTCCATCCAACCCCTCATGTGGGGCTGGCATCGGTTA  50

seq1  GCACCCGTTTCTCAGATACACTCACCTTTCTCTGTGTTCTCAGAAACTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCCGTTTCTCAGATACACTCACCTTTCTCTGTGTTCTCAGAAACTTC  100

seq1  TTCTACTAATATTTATCGCCTCTACTCAGCCTTACAGAAAACCCAGAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACTAATATTTATCGCCTCTACTCAGCCTTACAGAAAACCCAGAAGA  150

seq1  GAAAAAATGTCATCGAGGCACAAAGTCTTCACTTCTTTGCTATCTACTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAATGTCATCGAGGCACAAAGTCTTCACTTCTTTGCTATCTACTGT  200

seq1  CAGTGCCCCCATTATGTGAAAGAGGAACAAAACAGTAAGACGGAAAAGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGCCCCCATTATGTGAAAGAGGAACAAAACAGTAAGACGGAAAAGAC  250

seq1  AGAACACTGTTCGCCAAAGTAATCCCTTCCCAAATCATTGCACATCTGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACACTGTTCGCCAAAGTAATCCCTTCCCAAATCATTGCACATCTGTG  300

seq1  ACAGGCCCAGGTGGCACCTGCCCATCATGCCGGCTATACCCAGCTGAGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGCCCAGGTGGCACCTGCCCATCATGCCGGCTATACCCAGCTGAGCC  350

seq1  GGGCATTCCTGCCCACTGCAACAGTCTCTACTGCTTATTTCTCCATAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCATTCCTGCCCACTGCAACAGTCTCTACTGCTTATTTCTCCATAAGA  400

seq1  CCAGTTCCTCCAAAGACTAACTGCTTCTTCCTGAATCCCATTTAGCCAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTCCTCCAAAGACTAACTGCTTCTTCCTGAATCCCATTTAGCCAAA  450

seq1  CAGGACAAGGGAAAAGCAGAGTTTTCCCCTTAAAGGTACTTGAGAAAACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACAAGGGAAAAGCAGAGTTTTCCCCTTAAAGGTACTTGAGAAAACA  500

seq1  GCTCTGTCAATGGAAGGGAGAGAATTC  527
      |||||||||||||||||||||||||||
seq2  GCTCTGTCAATGGAAGGGAGAGAATTC  527