BAC Information

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BAC

Clone NameB6Ng01-036H05
Chromosome4 (Build37)
Map Location 123,245,072 - 123,395,085
singlet/doubletdoublet
Overlap geneMacf1, LOC100039110, Ndufs5
Upstream geneLOC633269, LOC633279, 9530002B09Rik, Ppt1, Cap1, Mfsd2, Mycl1, Trit1, Bmp8b, Oxct2b, Ppie, Hpcal4, Nt5c1a, Heyl, LOC194197, LOC622334, Pabpc4, Bmp8a, Oxct2a, D830031N03Rik
Downstream gene6330407G11Rik, Rhbdl2, LOC667064, Mycbp, Rragc, 1700057H15Rik, LOC100039332, Pou3f1, Utp11l, Fhl3, Sf3a3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-036H05.bB6Ng01-036H05.g
ACCDH864624DH864625
length458231
definitionDH864624|Mus musculus domesticus DNA, BAC clone: B6Ng01-036H05, 5' end.DH864625|Mus musculus domesticus DNA, BAC clone: B6Ng01-036H05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(123,245,072 - 123,245,535)(123,394,855 - 123,395,085)
sequence
attggcaggggttcaggtagtgggagggggtgttcaacagaactagagaa
ataacggaagactcaagacatcaataaaatttgagaataagaatattctc
agtatgtgaatgtaagtgttgacagtatgtattaaaatacttaaaatgtg
actatctgaaaatacttaaagttctaactagtaattgagtgtttacaaac
tgtcagtgccttcttgtaccttgtatcacatctgctaaagagatggtgac
ttgagaatatggccccaaaaagctgtctacttatgttcctataaccagat
ctcactcccagtaatttcttcaccacctttcagctgtactccacctcccc
ccgacacacacacggtgggggtgggggagaatcacattttcaaagtaaaa
taattaattatattgtcccaagagtactataatagcaaagaattaagaaa
taacactg
actctgtagaccaagctggccttgaactcacagagaagcatctgcctctg
tcttccaagtgttgagattaaaggcgtgcaccacatcctgattttggtcc
ccagagccctctactttcttcctgttgtgcacttggctcagcagccgctc
cagagcctctgtccgtcctcattgtcataacttctgttgtctatgtttgt
gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_123245072_123245535
seq2: B6Ng01-036H05.b_46_509

seq1  GAATTCATTGGCAGGGGTTCAGGTAGTGGGAGGGGGTGTTCAACAGAACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGGCAGGGGTTCAGGTAGTGGGAGGGGGTGTTCAACAGAACT  50

seq1  AGAGAAATAACGGAAGACTCAAGACATCAATAAAATTTGAGAATAAGAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAATAACGGAAGACTCAAGACATCAATAAAATTTGAGAATAAGAAT  100

seq1  ATTCTCAGTATGTGAATGTAAGTGTTGACAGTATGTATTAAAATACTTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCAGTATGTGAATGTAAGTGTTGACAGTATGTATTAAAATACTTAA  150

seq1  AATGTGACTATCTGAAAATACTTAAAGTTCTAACTAGTAATTGAGTGTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGACTATCTGAAAATACTTAAAGTTCTAACTAGTAATTGAGTGTTT  200

seq1  ACAAACTGTCAGTGCCTTCTTGTACCTTGTATCACATCTGCTAAAGAGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACTGTCAGTGCCTTCTTGTACCTTGTATCACATCTGCTAAAGAGAT  250

seq1  GGTGACTTGAGAATATGGCCCCAAAAAGCTGTCTACTTATGTTCCTATAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGACTTGAGAATATGGCCCCAAAAAGCTGTCTACTTATGTTCCTATAA  300

seq1  CCAGATCTCACTCCCAGTAATTTCTTCACCACCTTTCAGCTGTACTCCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATCTCACTCCCAGTAATTTCTTCACCACCTTTCAGCTGTACTCCAC  350

seq1  CTCCCCCCGACACACACACGGTGGGGGTGGGGGAGAATCACATTTTCAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCCCGACACACACACGGTGGGGGTGGGGGAGAATCACATTTTCAAA  400

seq1  GTAAAATAATAAATTAAATTGTCCCAAGAGTACTAGAATAGCAAAGAATT  450
      |||||||||| ||||| |||||||||||||||||| ||||||||||||||
seq2  GTAAAATAATTAATTATATTGTCCCAAGAGTACTATAATAGCAAAGAATT  450

seq1  AAGAAATAACACTG  464
      ||||||||||||||
seq2  AAGAAATAACACTG  464

seq1: chr4_123394855_123395085
seq2: B6Ng01-036H05.g_74_304 (reverse)

seq1  CACACACACACACACACACACACACACACACACAAACATAGACAACAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACACAAACATAGACAACAGAA  50

seq1  GTTATGACAATGAGGACGGACAGAGGCTCTGGAGCGGCTGCTGAGCCAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATGACAATGAGGACGGACAGAGGCTCTGGAGCGGCTGCTGAGCCAAG  100

seq1  TGCACAACAGGAAGAAAGTAGAGGGCTCTGGGGACCAAAATCAGGATGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACAACAGGAAGAAAGTAGAGGGCTCTGGGGACCAAAATCAGGATGTG  150

seq1  GTGCACGCCTTTAATCTCAACACTTGGAAGACAGAGGCAGATGCTTCTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCACGCCTTTAATCTCAACACTTGGAAGACAGAGGCAGATGCTTCTCT  200

seq1  GTGAGTTCAAGGCCAGCTTGGTCTACAGAGT  231
      |||||||||||||||||||||||||||||||
seq2  GTGAGTTCAAGGCCAGCTTGGTCTACAGAGT  231