BAC Information

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BAC

Clone NameB6Ng01-036K12
Chromosome4 (Build37)
Map Location 16,651,285 - 16,776,624
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100040095, LOC633695, Calb1, Decr1, Nbn, Osgin2, Ripk2, LOC667150, LOC383994
Downstream geneLOC100040154, LOC667212, LOC100040173
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-036K12.bB6Ng01-036K12.g
ACCDH864760DH864761
length1,041962
definitionDH864760|Mus musculus domesticus DNA, BAC clone: B6Ng01-036K12, 5' end.DH864761|Mus musculus domesticus DNA, BAC clone: B6Ng01-036K12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(16,651,285 - 16,652,347)(16,775,639 - 16,776,624)
sequence
gaattctcatgacctatgtagatgtctatcagtagttaggagacctgcag
aataggtatttataattgtgttagtaaacttataatcaaagtggagagag
aacttcttggtcttgtctgtttcattaaacacttttggttttcagtgtgt
atgactattttgcctgcattgatgtttctgtccattgtgtgtgcttggtg
ctcaaggaggtcagacatattttccatgttacatctaaatgagtcattag
ctcatagattttcaaatgacataactttatttttaaattctcaattctcc
aattataatgtacacattactaaaatgaatgggaaaagttgtcatttttt
tcattttaattttgcttttattgtttgcatagaggtcctttttctcatta
ccaatctattgtttaaattttaactagtgcaaatataatgataaatcgtt
tcccgaaaaaaaaaaaaaaaggaggtcagaatatgatatcgaatctcctg
gaactagagttagagatggttgtgaaccatcatgtaggtgctgagactca
aaccccagtcctctatgaaaatagcaagtgcaagagggaactttgagcat
cagcctacaaaaggcccttgaaattgtatatcttagcaattcctaatagg
aaataaaacattgagtggataaccatcacctttgttggttctttgccaga
tctgtccagttctttttcccggtgggagataaatagtgcagatacccatt
ctttagcttaatcatttagattaatatttagcattctttactgttctaca
ttcatatcctgaagaattcctgtatcactctgacatgtacataaagcatc
tctgaccccagtgtcgtttttcaagggtatgcattcattccattttgcac
atagagtagaacgtacaaccccttatataaagctcctagtcagaacattt
tatcctccatgacttatatagtctttccattttagtgagaaattcaccaa
cccccagtatatttccaaagcccttctcatttggagagttt
gaattctgaatttatttacttcattttcacaatggagagtaggagactaa
atgggaaggtagaagaggagaagttgtttaggttcactttagagcacttt
tctcagtatctgatatttagtgtttcagtcattatatcaaaatttgtaaa
accaaattctcttcttaagtatgtagaaaccttagggtcagaaacagttt
actgttaaagagaaaggcttataagtttggggacaacaatcgagattttt
ctggcaggaggttatggagtctataagaaagttagaaatggttcttaatg
ctccgaaggcaatacaaaaaactgggaggaaaaactattgccttcaagct
atacttagagtcttctccaaacacagtcacatgaataaaacattgctcaa
aactctgagaagtcaaatgcggccaataaccaccacctccccacagagga
tggcagaccatcaacatatacctactttatcactggtcatcttattttta
aaataatgatactcttaaaaatcaaagtatatatttcacacacacaaaaa
ggtaatctatgtgttaaaggctcacttaaggagaattctttcttaattag
ttggttttacatgtgaataaaatgagaagttattttgaaattctttttca
tgagtagcaatttttagaaaagacaaagatgattctaaccattgaggaga
aacttggaatcatacacccttctgagcatccacggatcaataattattgg
ttagttacagttctgttcacattataaaaagtgcatgttccctagtagag
gctatgaaatttcaatatgacattagaaaagccaggtttgaaaccatagt
acttattatgatagatctgaatggtcagtgtagtcatgagatctctagac
tcgtgatgtcagctcaactctgcagtcactactctcagtagtcattccta
tcagcagctgct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_16651285_16652347
seq2: B6Ng01-036K12.b_47_1087

seq1  GAATTCTCATGACCTATGTAGATGTCTATCAGTAGTTAGGAGACCTGCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCATGACCTATGTAGATGTCTATCAGTAGTTAGGAGACCTGCAG  50

seq1  AATAGGTATTTATAATTGTGTTAGTAAACTTATAATCAAAGTGGAGAGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGGTATTTATAATTGTGTTAGTAAACTTATAATCAAAGTGGAGAGAG  100

seq1  AACTTCTTGGTCTTGTCTGTTTCATTAAACACTTTTGGTTTTCAGTGTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCTTGGTCTTGTCTGTTTCATTAAACACTTTTGGTTTTCAGTGTGT  150

seq1  ATGACTATTTTGCCTGCATTGATGTTTCTGTCCATTGTGTGTGCTTGGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTATTTTGCCTGCATTGATGTTTCTGTCCATTGTGTGTGCTTGGTG  200

seq1  CTCAAGGAGGTCAGACATATTTTCCATGTTACATCTAAATGAGTCATTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGGAGGTCAGACATATTTTCCATGTTACATCTAAATGAGTCATTAG  250

seq1  CTCATAGATTTTCAAATGACATAACTTTATTTTTAAATTCTCAATTCTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATAGATTTTCAAATGACATAACTTTATTTTTAAATTCTCAATTCTCC  300

seq1  AATTATAATGTACACATTACTAAAATGAATGGGAAAAGTTGTCATTTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATAATGTACACATTACTAAAATGAATGGGAAAAGTTGTCATTTTTT  350

seq1  TCATTTTAATTTTGCTTTTATTGTTTGCATAGAGGTCCTTTTTCTCATTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTAATTTTGCTTTTATTGTTTGCATAGAGGTCCTTTTTCTCATTA  400

seq1  CCAATCTATTGTTTAAATTTTAACTAGTGCAAATATAATGATAAATCGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATCTATTGTTTAAATTTTAACTAGTGCAAATATAATGATAAATCGTT  450

seq1  TCCCGAAAAAAAAAAAAAAAGGAGGTCAGAATATGATATCGAATCTCCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCGAAAAAAAAAAAAAAAGGAGGTCAGAATATGATATCGAATCTCCTG  500

seq1  GAACTAGAGTTAGAGATGGTTGTGAACCATCATGTAGGTGCTGAGACTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTAGAGTTAGAGATGGTTGTGAACCATCATGTAGGTGCTGAGACTCA  550

seq1  AACCCCAGTCCTCTATGAAAATAGCAAGTGCAAGAGGGAACTTTGAGCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCCAGTCCTCTATGAAAATAGCAAGTGCAAGAGGGAACTTTGAGCAT  600

seq1  CAGCCTACAAAAGGCCCTTGAAATTGTATATCTTAGCAATTCCTAATAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTACAAAAGGCCCTTGAAATTGTATATCTTAGCAATTCCTAATAGG  650

seq1  AAATAAAACATTGAGTGGATAACCATCACCTTTGTTGGTTCTTTGCCAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAAACATTGAGTGGATAACCATCACCTTTGTTGGTTCTTTGCCAGA  700

seq1  TCTGTCCAGTTCTTTTTCCCGGTGGGAGATAAATAGTGCAGATACCCATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCCAGTTCTTTTTCCCGGTGGGAGATAAATAGTGCAGATACCCATT  750

seq1  CTTTAGCTTAATCATTTAGATTAATATTTAGCATTCTTTACTGTTCTACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGCTTAATCATTTAGATTAATATTTAGCATTCTTTACTGTTCTACA  800

seq1  TTCATATTCTGAAGGAATTCCTGTATCACTCTGACATGTACATAAAGCAT  850
      ||||||| ||||| ||||||||||||||||||||||||||||||||||||
seq2  TTCATATCCTGAA-GAATTCCTGTATCACTCTGACATGTACATAAAGCAT  849

seq1  CTCTGACCCCAGTGTTCGTTTTTCAAGGGGTATGCATTCATTCCATTTTT  900
      |||||||||||||| ||||||||||| |||||||||||||||||| ||||
seq2  CTCTGACCCCAGTG-TCGTTTTTCAA-GGGTATGCATTCATTCCA-TTTT  896

seq1  GCAACATAGAAGTAGAAAACGTACAAACCCCTTATATAAAGCTCTTAGTC  950
      || |||||| |||||  ||||||| ||||||||||||||||||| |||||
seq2  GC-ACATAG-AGTAG--AACGTAC-AACCCCTTATATAAAGCTCCTAGTC  941

seq1  AGAAACAATTCTAT-CTCCATGGAACTTTATAATAGTCTTTCCAATTTTT  999
      ||||   ||| ||| |||||||  || |||| ||||||||||||   |||
seq2  AGAA--CATTTTATCCTCCATG--AC-TTAT-ATAGTCTTTCCA---TTT  982

seq1  AAGTGAGAAATCTACAACACTCAAGTAATATTTCCAAAAAGCCCTTTCTC  1049
       ||||||||||  || |  | | ||| ||||||||  ||||||| |||||
seq2  TAGTGAGAAATTCACCAACCCCCAGT-ATATTTCC--AAAGCCC-TTCTC  1028

seq1  ATTTTGGAGAGTTT  1063
      | ||||||||||||
seq2  A-TTTGGAGAGTTT  1041

seq1: chr4_16775639_16776624
seq2: B6Ng01-036K12.g_66_1027 (reverse)

seq1  AGCAGCTGCTGAAAAAGGGATTGGACTACCTTGAGAAGTAGTGACTGCAG  50
      |||||||||||| |   ||| | ||||||  |||| ||||||||||||||
seq2  AGCAGCTGCTGATA---GGAAT-GACTAC--TGAG-AGTAGTGACTGCAG  43

seq1  AGTTTGAGCTTGACCATCACGGGTCTAGAGAAATCTCATGGACCTACACT  100
      || |||||| ||| ||||||| ||||||||  ||||||||   |||||||
seq2  AG-TTGAGC-TGA-CATCACGAGTCTAGAG--ATCTCATG--ACTACACT  86

seq1  GACCATTCAGAATCTAATCATAATAAGTACTATGGTTTCCAAACCCTGGC  150
      |||||||||| |||| |||||||||||||||||||||||  || ||||||
seq2  GACCATTCAG-ATCT-ATCATAATAAGTACTATGGTTTC--AAACCTGGC  132

seq1  TTTTTCTTAATGTCATATTTGAAATTTTCATAGCCTCTTACTTAGGGAAC  200
      ||||   |||||||||| |||||| |||||||||||| ||| ||||||||
seq2  TTTT--CTAATGTCATA-TTGAAA-TTTCATAGCCTC-TAC-TAGGGAAC  176

seq1  ATGCACTTTTTATAAATGTG-ACAG-ACTGTAACTAAACCAATAATTATT  248
      ||||||||||||| |||||| |||| ||||||||| ||||||||||||||
seq2  ATGCACTTTTTAT-AATGTGAACAGAACTGTAACT-AACCAATAATTATT  224

seq1  GATCCGTGGATGCTCAGAAGGGTGTATGATTCCAAGTTTCTCCTCAATGG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCGTGGATGCTCAGAAGGGTGTATGATTCCAAGTTTCTCCTCAATGG  274

seq1  TTAGAATCATCTTTGTCTTTTCTAAAAATTGCTACTCATGAAAAAGAATT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAATCATCTTTGTCTTTTCTAAAAATTGCTACTCATGAAAAAGAATT  324

seq1  TCAAAATAACTTCTCATTTTATTCACATGTAAAACCAACTAATTAAGAAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAATAACTTCTCATTTTATTCACATGTAAAACCAACTAATTAAGAAA  374

seq1  GAATTCTCCTTAAGTGAGCCTTTAACACATAGATTACCTTTTTGTGTGTG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTTAAGTGAGCCTTTAACACATAGATTACCTTTTTGTGTGTG  424

seq1  TGAAATATATACTTTGATTTTTAAGAGTATCATTATTTTAAAAATAAGAT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATATATACTTTGATTTTTAAGAGTATCATTATTTTAAAAATAAGAT  474

seq1  GACCAGTGATAAAGTAGGTATATGTTGATGGTCTGCCATCCTCTGTGGGG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAGTGATAAAGTAGGTATATGTTGATGGTCTGCCATCCTCTGTGGGG  524

seq1  AGGTGGTGGTTATTGGCCGCATTTGACTTCTCAGAGTTTTGAGCAATGTT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGTGGTTATTGGCCGCATTTGACTTCTCAGAGTTTTGAGCAATGTT  574

seq1  TTATTCATGTGACTGTGTTTGGAGAAGACTCTAAGTATAGCTTGAAGGCA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCATGTGACTGTGTTTGGAGAAGACTCTAAGTATAGCTTGAAGGCA  624

seq1  ATAGTTTTTCCTCCCAGTTTTTTGTATTGCCTTCGGAGCATTAAGAACCA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTTTTCCTCCCAGTTTTTTGTATTGCCTTCGGAGCATTAAGAACCA  674

seq1  TTTCTAACTTTCTTATAGACTCCATAACCTCCTGCCAGAAAAATCTCGAT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAACTTTCTTATAGACTCCATAACCTCCTGCCAGAAAAATCTCGAT  724

seq1  TGTTGTCCCCAAACTTATAAGCCTTTCTCTTTAACAGTAAACTGTTTCTG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTCCCCAAACTTATAAGCCTTTCTCTTTAACAGTAAACTGTTTCTG  774

seq1  ACCCTAAGGTTTCTACATACTTAAGAAGAGAATTTGGTTTTACAAATTTT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTAAGGTTTCTACATACTTAAGAAGAGAATTTGGTTTTACAAATTTT  824

seq1  GATATAATGACTGAAACACTAAATATCAGATACTGAGAAAAGTGCTCTAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATAATGACTGAAACACTAAATATCAGATACTGAGAAAAGTGCTCTAA  874

seq1  AGTGAACCTAAACAACTTCTCCTCTTCTACCTTCCCATTTAGTCTCCTAC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAACCTAAACAACTTCTCCTCTTCTACCTTCCCATTTAGTCTCCTAC  924

seq1  TCTCCATTGTGAAAATGAAGTAAATAAATTCAGAATTC  986
      ||||||||||||||||||||||||||||||||||||||
seq2  TCTCCATTGTGAAAATGAAGTAAATAAATTCAGAATTC  962