BAC Information

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BAC

Clone NameB6Ng01-036K24
Chromosome4 (Build37)
Map Location 68,196,491 - 68,197,529
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC433715, Tcp1-ps1
Downstream geneDbc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-036K24.bB6Ng01-036K24.g
ACCDH864778DH864779
length1,1271,040
definitionDH864778|Mus musculus domesticus DNA, BAC clone: B6Ng01-036K24, 5' end.DH864779|Mus musculus domesticus DNA, BAC clone: B6Ng01-036K24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaataactcacttaaagagatacaggagaacactgctaaagagtt
acaagtccttaaagaaaaacaggaaaacactgctaaagagttacaagtcc
ttaaagaaaaacaggaaaacacaaccaaataggtagaagtccttatagaa
aaacaggaaaacacatccaaacaggtgatggaaatgaacaaaaccatact
agacctaaaaagggaagtagacacaataaagaaaacccaaagtgaggcaa
cgctggagatagaaaccctaggaaagaaatctggaaccatagatgccagc
atcggcaacagaatacaagagatggaagagagaatctcaggtgcagaaga
caccatagagaacatgggcacaacaatcaaagaaaatggaaaatgcaaaa
agatcctaactcaaaacatccaggaaatccaggacacaatgagaagacca
aacctacggataataggagtggatgagaatgaagattttcaactcaaagg
accagcaaacatcttcaacaaaattattgaagaaaacttcccaaatctaa
agaaagagatacccatgaatatacaagaagcctacagaactccaaataga
ctggaccagaaaagaaattcctcccgacacataataatcagaacatcaaa
tgcactaaataaagatagaatactaaaagcagtaagggaaaaaggtcaag
taaaatataaaggcaagcctatcagaatttacaccagatttttcaccaga
gactatgaaagccagaagagcctggacagatgttatacagacactaagag
acacaattgccagcccaggctactatacccagccaaactctcaattacat
agatggagaaaccaaagtattccacgacaaactaaattcacccatatctt
ctccacgattcagccttcaaggatatacgaaaaaacatacatgacggaca
cgcctagaaaaaacagaagatatcctcacacttaagagacgcacaggacg
atgccaactttacacaattaccgaagcacattacttccttattcctgtca
tggaccatcctataagactgactacgactggctactacgacacatcgtcg
ctacggagcatcagtagacgacccata
gaattcattctctctagagtcatccagccagcctctcactgaactcgctc
atactgcattcctttaaggatttataagacagaaaagaaaatagcaagac
agataaaaacatttcttgatacaggcataaagctctaaggaataaaagca
gggaggggagccccagacaggaaaagactagagaagattaaatgtgtacg
tgtcactaatcactatattcaaccttttagaaatgctctttgtgcagaaa
ggcgtttatagaaagagagcttacaaagaaatgggacacagacctgagac
acaaagttcgaaggcaaaatgtaatgtgattaagctccaagtggcttgta
gccaaatgtggagttctccacatatagtccacttaacctgaccttgattt
aaaaagctgttccacctacacatgtgcagagggatgggtaaggaactgag
atggaaaagctcccagcatcctccccacatcacagtgcttagttacaaag
gatcttgaagtctgactgattaccaagcaattataaacacattttggaaa
ctgtttcctcccagaggctccagggctctatgttgggaaggggctccctt
ttctcacccaagtcatgggtaattaagtgagaagtgactttttttttttt
tgccaatgatttttccacagcagggagggagagaaattttgtaaatattt
acaaaatactctatgtacacacacaaagagaaaaaggtcacaggtggaaa
gggcactggaactatgtattggttgctgctatgccacacaaaagggaggt
gaggctgggaggcagaacatggttttcttgaaatcactgatggaactgga
ttctgggagcagaacatggcttctattagtctttttgtacagcacatgtg
ttttttgttgtaggaacgtgatcagggacttctcatgggcaaggttcatc
tttttttttttttttcatttttgtaagtatttagctcatttacattccaa
tgctataccaaaggtccccgatacacccaccctcactccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_68196491_68197529
seq2: B6Ng01-036K24.g_64_1103 (reverse)

seq1  GGGAGTGGGGGTGGGTGGGTATGGGGGACTTTTGGTATAGCATTGGAAAT  50
      ||||||| ||||||||  |||| |||||| |||||||||||||||| |||
seq2  GGGAGTGAGGGTGGGT--GTATCGGGGACCTTTGGTATAGCATTGG-AAT  47

seq1  GTAAATGAGCTAAATACCTAACAAAAAATGGAAAAAAAAAAAAAAAGAAT  100
      |||||||||||||||| || |||||||   ||||||||||||||||| ||
seq2  GTAAATGAGCTAAATA-CTTACAAAAA--TGAAAAAAAAAAAAAAAG-AT  93

seq1  GAACCTTGCACATGAGAAGTCCCTGATCACTGTTTCCTACAACACACAAC  150
      ||||||||| ||||||||||||||||||||   ||||||||||| | |||
seq2  GAACCTTGCCCATGAGAAGTCCCTGATCAC--GTTCCTACAACAAAAAAC  141

seq1  -CATGTGCTGTACAAAGAGAGCTATAGGAG-CATGTTCTGCATCCAGACT  198
       ||||||||||||||| |||   |||| || ||||||||||  ||||| |
seq2  ACATGTGCTGTACAAAAAGACTAATAGAAGCCATGTTCTGCTCCCAGAAT  191

seq1  CCAGTTCCATCAGTGATTTCAGGAAAACCATGTTCTGCCTCCCAGCCTCA  248
      ||||||||||||||||||||| ||||||||||||||||||||||||||| 
seq2  CCAGTTCCATCAGTGATTTCAAGAAAACCATGTTCTGCCTCCCAGCCTC-  240

seq1  ACCTCCCTTTTGTGTGGCATAGCAGCAA-CAATACATAGTTCCAGTGCCC  297
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  ACCTCCCTTTTGTGTGGCATAGCAGCAACCAATACATAGTTCCAGTGCCC  290

seq1  TTTCCACCTGTGATCTTTTTCTCTTTGTGTGTGTACATAGAGTATTTTGT  347
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TTTCCACCTGTGACCTTTTTCTCTTTGTGTGTGTACATAGAGTATTTTGT  340

seq1  AAATATTTACAAAATCTCTCT-CCTTCCTGCTGTGG-AAAATCATTGGC-  394
      ||||||||||||||| ||||| ||| |||||||||| |||||||||||| 
seq2  AAATATTTACAAAATTTCTCTCCCTCCCTGCTGTGGAAAAATCATTGGCA  390

seq1  TATAAAAAAAAAGTCACTTCTCACTTAATTA-CCATGACTTGGGTGAGAA  443
       | |||||||||||||||||||||||||||| ||||||||||||||||||
seq2  AAAAAAAAAAAAGTCACTTCTCACTTAATTACCCATGACTTGGGTGAGAA  440

seq1  AA-GGAGCCCCTT-CCAACATAGAG-CCTGGAGCCTCTGGGAGGAAACAG  490
      || |||||||||| ||||||||||| ||||||||||||||||||||||||
seq2  AAGGGAGCCCCTTCCCAACATAGAGCCCTGGAGCCTCTGGGAGGAAACAG  490

seq1  TTTCC-AAATGTGTTTATAATTGCTTGGTAATCAGTCAGACTTCAAGATC  539
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAAAATGTGTTTATAATTGCTTGGTAATCAGTCAGACTTCAAGATC  540

seq1  CTTTGTAACTAAGCACTGTGATGTGGGGAGGATGCTGGGAGCTTTTCCAT  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTAACTAAGCACTGTGATGTGGGGAGGATGCTGGGAGCTTTTCCAT  590

seq1  CTCAGTTCCTTACCCATCCCTCTGCACATGTGTAGGTGGAACAGCTTTTT  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTTCCTTACCCATCCCTCTGCACATGTGTAGGTGGAACAGCTTTTT  640

seq1  AAATCAAGGTCAGGTTAAGTGGACTATATGTGGAGAACTCCACATTTGGC  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAAGGTCAGGTTAAGTGGACTATATGTGGAGAACTCCACATTTGGC  690

seq1  TACAAGCCACTTGGAGCTTAATCACATTACATTTTGCCTTCGAACTTTGT  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAGCCACTTGGAGCTTAATCACATTACATTTTGCCTTCGAACTTTGT  740

seq1  GTCTCAGGTCTGTGTCCCATTTCTTTGTAAGCTCTCTTTCTATAAACGCC  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCAGGTCTGTGTCCCATTTCTTTGTAAGCTCTCTTTCTATAAACGCC  790

seq1  TTTCTGCACAAAGAGCATTTCTAAAAGGTTGAATATAGTGATTAGTGACA  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGCACAAAGAGCATTTCTAAAAGGTTGAATATAGTGATTAGTGACA  840

seq1  CGTACACATTTAATCTTCTCTAGTCTTTTCCTGTCTGGGGCTCCCCTCCC  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTACACATTTAATCTTCTCTAGTCTTTTCCTGTCTGGGGCTCCCCTCCC  890

seq1  TGCTTTTATTCCTTAGAGCTTTATGCCTGTATCAAGAAATGTTTTTATCT  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTTATTCCTTAGAGCTTTATGCCTGTATCAAGAAATGTTTTTATCT  940

seq1  GTCTTGCTATTTTCTTTTCTGTCTTATAAATCCTTAAAGGAATGCAGTAT  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTGCTATTTTCTTTTCTGTCTTATAAATCCTTAAAGGAATGCAGTAT  990

seq1  GAGCGAGTTCAGTGAGAGGCTGGCTGGATGACTCTAGAGAGAATGAATTC  1039
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCGAGTTCAGTGAGAGGCTGGCTGGATGACTCTAGAGAGAATGAATTC  1040