BAC Information

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BAC

Clone NameB6Ng01-037F12
Chromosome4 (Build37)
Map Location 23,671,089 - 23,672,206
singlet/doubletsinglet
Overlap genenone
Upstream gene1700025O08Rik, LOC625462, LOC383998, LOC100040464
Downstream geneLOC623873, LOC664973, F730047E07Rik, Klhl32
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-037F12.bB6Ng01-037F12.g
ACCDH865245DH865246
length1,094782
definitionDH865245|Mus musculus domesticus DNA, BAC clone: B6Ng01-037F12, 5' end.DH865246|Mus musculus domesticus DNA, BAC clone: B6Ng01-037F12, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgtagaataaacaaaatggtttgtttttggtttaagacacaaga
attgataacatattttaaaataaattttcataattgttcattttgttaat
aattactcttcaaattatgatagctgaaaattaattttgttgctgaaggc
tattttagggctttttctttataacattaacatccaaataccaacatttt
caacatgctgcaacatgtttctgaatttgggaataaaataatattacaaa
gtatttcagtatcttgatgaaaagaattagagaaaattttacatagatta
aagaatgagagttttctgttttattttagacctagcctcaaaatatatta
ggtgtattcagacagttttcattcactacaatgatgagaaaattagtatt
atgcttattctccaataaggtatgattatttctggtagaactgcatagtg
ggaccctgaggattttccagttctgattattttacttatttattaagact
ttgatattaaaggacatcttttaagtcagatattttacaatatgttctga
ctcaaaattaggtaaaaatcatagtattaagttcataagttaatggcact
caaagttgccacctctgcaacttcactgtgaggagcacgctgacagactc
tgtgctgtgtttgtctatgagatgatttccttgaagtcccgtaatgagtt
gtttttggcaggattaatgagtattataatggtaaatggatgtttgcagc
tcagttgtgttccatcatggagtaacatggggtttctggtcccttggagg
ccataattggtggcattaatgcactttttaattacacttcttgaaaaaaa
atgaattgaaccaaaacaaaagctaagtgatcatcgctctgctgttcaca
tggtgtaaaccgaagactgtcgctgctgctgatgtcggtgatttgaatta
tactctttagagggaacgtgcaggagatttagtgatatttgtttagaaag
ctttggtgctttgcattctatcctatatactaataactccccaatgcata
taagtagcttgcatgctacagtgagaaatgtatatgttgaaatt

gaattcatgaaattcttaggcaaatggagggaactagaaaatatcatcct
gagtgaagtaactcagtcacaaaagaacacacatggtatgtccttattga
taagtggatattagcctaaaactcaaaatacctaagatacaatccacaga
ccacatgaagctcaagaagaagaaagaccaaagtgtggataccacagtct
atcttagaatggggaacaaaatactcctgggaggaaatttagagacaaag
tgtggagcagagattgagggaaaggcgatccagagactgccccacctggg
gctccatcttatatacagacaccaaacccagacactattgcatatgccaa
gaagtgcttgctgacaggagcctgatatagctgtctcctaagaggttctg
ccagagtctgacaaatccacagaggtggatgcttgcagccaaccgttgga
cgggtccccagtagacaagttagagaaagaaatgaaggagctgaaagtgt
ttgcaacccataggaagaacaacaatatcaaccaacaagacccccagggc
tcccaggaactaaaccattaatcaaagagtatacatggagggtcccaggg
ctccagccacatatgtagcagaatatggccttgttggataacaatgggag
gagaggcccttggttctgggaagactccatcccccagtgtaggagaatgc
cagggcagggaggcaggagtgggtgggcaggtgtttgagcaccctcatag
cagggagagggaggatgggataggggctttga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_23671089_23672206
seq2: B6Ng01-037F12.b_46_1139 (reverse)

seq1  AATTTCATACATATATACATTTCTCACCTGTATGCAATGCAAAGGCTTAC  50
      |||||||   | |||||||||||||| ||||| || ||||||  || |||
seq2  AATTTCA---ACATATACATTTCTCA-CTGTA-GC-ATGCAA--GC-TAC  41

seq1  TATATATGCATTTGGTGAGTTTATTTTAGTATATAGGATAAGGAAATGCA  100
      | |||||||| |||| ||||   | |||||||||||||||    ||||||
seq2  T-TATATGCA-TTGGGGAGT---TATTAGTATATAGGATA---GAATGCA  83

seq1  AAGGCACCAAAAGCCTTTTCTAAACAAATATCACTAAAATCTCCTGCACG  150
      || ||||| |||||  ||||||||||||||||||| ||||||||||||||
seq2  AA-GCACC-AAAGC--TTTCTAAACAAATATCACT-AAATCTCCTGCACG  128

seq1  TTCCCTCTAAAGAGTATAATTCAAATCACCGACATCAGCAGCAGCGACAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTCTAAAGAGTATAATTCAAATCACCGACATCAGCAGCAGCGACAG  178

seq1  TCTTCGGTTTACACCATGTGAAACAGCAGAGCGATGATCACTTAGCTTTT  250
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TCTTCGGTTTACACCATGTG-AACAGCAGAGCGATGATCACTTAGCTTTT  227

seq1  GTTTTGGTTCAATTCATTTTTTTTTCAAGAAGTGTAATTAAAAAGTGCAT  300
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GTTTTGGTTCAATTCA-TTTTTTTTCAAGAAGTGTAATTAAAAAGTGCAT  276

seq1  TAATGCCACCAATTATGGCCTCCAAGGGACCAGAAACCCCATGTTACTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGCCACCAATTATGGCCTCCAAGGGACCAGAAACCCCATGTTACTCC  326

seq1  ATGATGGAACACAACTGAGCTGCAAACATCCATTTACCATTATAATACTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGGAACACAACTGAGCTGCAAACATCCATTTACCATTATAATACTC  376

seq1  ATTAATCCTGCCAAAAACAACTCATTACGGGACTTCAAGGAAATCATCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATCCTGCCAAAAACAACTCATTACGGGACTTCAAGGAAATCATCTC  426

seq1  ATAGACAAACACAGCACAGAGTCTGTCAGCGTGCTCCTCACAGTGAAGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGACAAACACAGCACAGAGTCTGTCAGCGTGCTCCTCACAGTGAAGTT  476

seq1  GCAGAGGTGGCAACTTTGAGTGCCATTAACTTATGAACTTAATACTATGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGGTGGCAACTTTGAGTGCCATTAACTTATGAACTTAATACTATGA  526

seq1  TTTTTACCTAATTTTGAGTCAGAACATATTGTAAAATATCTGACTTAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTACCTAATTTTGAGTCAGAACATATTGTAAAATATCTGACTTAAAA  576

seq1  GATGTCCTTTAATATCAAAGTCTTAATAAATAAGTAAAATAATCAGAACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTCCTTTAATATCAAAGTCTTAATAAATAAGTAAAATAATCAGAACT  626

seq1  GGAAAATCCTCAGGGTCCCACTATGCAGTTCTACCAGAAATAATCATACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAATCCTCAGGGTCCCACTATGCAGTTCTACCAGAAATAATCATACC  676

seq1  TTATTGGAGAATAAGCATAATACTAATTTTCTCATCATTGTAGTGAATGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGGAGAATAAGCATAATACTAATTTTCTCATCATTGTAGTGAATGA  726

seq1  AAACTGTCTGAATACACCTAATATATTTTGAGGCTAGGTCTAAAATAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGTCTGAATACACCTAATATATTTTGAGGCTAGGTCTAAAATAAAA  776

seq1  CAGAAAACTCTCATTCTTTAATCTATGTAAAATTTTCTCTAATTCTTTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAACTCTCATTCTTTAATCTATGTAAAATTTTCTCTAATTCTTTTC  826

seq1  ATCAAGATACTGAAATACTTTGTAATATTATTTTATTCCCAAATTCAGAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGATACTGAAATACTTTGTAATATTATTTTATTCCCAAATTCAGAA  876

seq1  ACATGTTGCAGCATGTTGAAAATGTTGGTATTTGGATGTTAATGTTATAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTTGCAGCATGTTGAAAATGTTGGTATTTGGATGTTAATGTTATAA  926

seq1  AGAAAAAGCCCTAAAATAGCCTTCAGCAACAAAATTAATTTTCAGCTATC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAAGCCCTAAAATAGCCTTCAGCAACAAAATTAATTTTCAGCTATC  976

seq1  ATAATTTGAAGAGTAATTATTAACAAAATGAACAATTATGAAAATTTATT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTTGAAGAGTAATTATTAACAAAATGAACAATTATGAAAATTTATT  1026

seq1  TTAAAATATGTTATCAATTCTTGTGTCTTAAACCAAAAACAAACCATTTT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATATGTTATCAATTCTTGTGTCTTAAACCAAAAACAAACCATTTT  1076

seq1  GTTTATTCTACAGAATTC  1118
      ||||||||||||||||||
seq2  GTTTATTCTACAGAATTC  1094


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