BAC Information

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BAC

Clone NameB6Ng01-038F12
Chromosome4 (Build37)
Map Location 9,201,144 - 9,202,052
singlet/doubletsinglet
Overlap gene4933402J24Rik
Upstream geneLOC100039505, LOC100039478, Rab2, EG666752, LOC666760, Chd7, LOC666782, LOC100039584
Downstream geneAsph, Gdf6, 4930448K20Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-038F12.bB6Ng01-038F12.g
ACCDH865931DH865932
length1,094909
definitionDH865931|Mus musculus domesticus DNA, BAC clone: B6Ng01-038F12, 5' end.DH865932|Mus musculus domesticus DNA, BAC clone: B6Ng01-038F12, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttaactgaggaataccaaatggctgagacacacctaaagaaatg
ttcaatattcttagtcatcagggagatgcaatcaaaacaaccctatgacc
tcacaccagtcagaatggctaagatcaaaaactcaggtgacagcagatgt
tggcaaggatgtggagaaagaggaatactcctccattgctggtgggattg
caagctggtacaaccactctggaaataagtctggtggtacctcagaaaat
tagacatagcactacctgaggacccagctataccattcctgcaaatataa
cctgaagatgcttcaacatgtaataaggacacatgctccactatgttcat
agcagccatatttataatagccagacgctggaaagaacccagatgtccct
caacagagaaatggatacagaaaatgtggtacatttacacaatggagtac
tactcagctattaaaaataatgacttcatgaaattcacaggcaaatggat
ggaacttgaaaatatcatcctgagtgagttaacccaatcataaaagaaca
cacatggtatgcactcactgataagtggatattagcctcaaatctcagaa
tacccaatatacaattctcaggccatatgaagctcaagaagaaggaagac
ccaagtgtggatgctttagttcttcttagaagggagaacaaaatgctcac
aggaggaaatatggagacaaagtgtggagcagagactgaaggaaaggcca
tccagagactgtcccacctggggatccattcaatatacagtcaccaaacc
aggacgctattgtggatgccaggtagtgccttgctgattgaagcctgata
tggctgttccctgacaggctctgccagagtctgacaaatacagaggcaga
tgcttgcgtcgactgagctcagggtccccagtggaggagttggaagaggg
actgaaggacttgaggggtttgcattcctatgggggagcacagtgtcaac
tggccgactctttggagctctgggactggaccagactaagaataaacatg
gaagggacccttgactccagctgcttattggtgcgatgatggcc
gaattctccgtaccagagttggggagagtttggaaggacagagtggagac
ctttaatcatcagaaagtgtagcgtgatcagaatttagtcctggctcact
gtcaacattccatcacctctatctcagccctaacccagggcttactcctt
ccccataaatattcattgtgtagattcccttggatccttttaaaatagca
accaagcacagtcatgtgcttccatgtgctcctgttctagagaaaggtta
aaaggaaactggaaggagttccatcaacatagagacactgagaacttctt
acccaaaatagatgcctgatcaaaatgaaaatagactaggcctcaggtac
attggagcaatttggcaaactgttgactcctgagttctaaaacactattt
tgtcatctttgatggttttgtgtgaccaggcaagaggaggctaggcaagc
tagaggacagaagctcttcctcctgcctccacactgcttagggtgggaca
agggtttcactagggagcttttcactttctaatcttggggaaaaatggtg
cacacgggaaagggatacacgcatgttaaaaattagactgaaatgtcatc
ataggatgttgctccatcgccatatgaagaagccccaagcagttggcagt
ccatagccaaagtggatcagctgtgtttggtaggcatatctctgggagag
gaagagaggaggtggaaatgcctaactactttgtctcaaaggaaaaaggt
gcttccccaaatagactccatgatttgagaaaaaataatatagaggtgga
tgagcaatgaggttccccaatttgggattaaattaccctctttactccgc
tttttcaggacatctaagaattggggattcttcttatgaatgtattgggg
acaacaatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_9201144_9202052
seq2: B6Ng01-038F12.g_68_976 (reverse)

seq1  CATTGTTGTCCCAACTACATTCATAAGAAGAGTCCCAATTACTTAGATGT  50
      |||||||||||| | |||||||||||||||| |||| | | |||||||||
seq2  CATTGTTGTCCCCAATACATTCATAAGAAGAATCCCCAATTCTTAGATGT  50

seq1  CCTGAAAAAGCCGAGTAAAGAGGGTAATTTAATCCCAAATTGGGGAACCT  100
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CCTGAAAAAGCGGAGTAAAGAGGGTAATTTAATCCCAAATTGGGGAACCT  100

seq1  CATTGCTCATCCACCTCTATATTATTTTTTCTCAAATCATGGAGTCTATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGCTCATCCACCTCTATATTATTTTTTCTCAAATCATGGAGTCTATT  150

seq1  TGGGGAAGCACCTTTTTCCTTTGAGACAAAGTAGTTAGGCATTTCCACCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGAAGCACCTTTTTCCTTTGAGACAAAGTAGTTAGGCATTTCCACCT  200

seq1  CCTCTCTTCCTCTCCCAGAGATATGCCTACCAAACACAGCTGATCCACTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCTTCCTCTCCCAGAGATATGCCTACCAAACACAGCTGATCCACTT  250

seq1  TGGCTATGGACTGCCAACTGCTTGGGGCTTCTTCATATGGCGATGGAGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTATGGACTGCCAACTGCTTGGGGCTTCTTCATATGGCGATGGAGCA  300

seq1  ACATCCTATGATGACATTTCAGTCTAATTTTTAACATGCGTGTATCCCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCTATGATGACATTTCAGTCTAATTTTTAACATGCGTGTATCCCTT  350

seq1  TCCCGTGTGCACCATTTTTCCCCAAGATTAGAAAGTGAAAAGCTCCCTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCGTGTGCACCATTTTTCCCCAAGATTAGAAAGTGAAAAGCTCCCTAG  400

seq1  TGAAACCCTTGTCCCACCCTAAGCAGTGTGGAGGCAGGAGGAAGAGCTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACCCTTGTCCCACCCTAAGCAGTGTGGAGGCAGGAGGAAGAGCTTC  450

seq1  TGTCCTCTAGCTTGCCTAGCCTCCTCTTGCCTGGTCACACAAAACCATCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTCTAGCTTGCCTAGCCTCCTCTTGCCTGGTCACACAAAACCATCA  500

seq1  AAGATGACAAAATAGTGTTTTAGAACTCAGGAGTCAACAGTTTGCCAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGACAAAATAGTGTTTTAGAACTCAGGAGTCAACAGTTTGCCAAAT  550

seq1  TGCTCCAATGTACCTGAGGCCTAGTCTATTTTCATTTTGATCAGGCATCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCCAATGTACCTGAGGCCTAGTCTATTTTCATTTTGATCAGGCATCT  600

seq1  ATTTTGGGTAAGAAGTTCTCAGTGTCTCTATGTTGATGGAACTCCTTCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGGGTAAGAAGTTCTCAGTGTCTCTATGTTGATGGAACTCCTTCCA  650

seq1  GTTTCCTTTTAACCTTTCTCTAGAACAGGAGCACATGGAAGCACATGACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCCTTTTAACCTTTCTCTAGAACAGGAGCACATGGAAGCACATGACT  700

seq1  GTGCTTGGTTGCTATTTTAAAAGGATCCAAGGGAATCTACACAATGAATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTTGGTTGCTATTTTAAAAGGATCCAAGGGAATCTACACAATGAATA  750

seq1  TTTATGGGGAAGGAGTAAGCCCTGGGTTAGGGCTGAGATAGAGGTGATGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGGGGAAGGAGTAAGCCCTGGGTTAGGGCTGAGATAGAGGTGATGG  800

seq1  AATGTTGACAGTGAGCCAGGACTAAATTCTGATCACGCTACACTTTCTGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTGACAGTGAGCCAGGACTAAATTCTGATCACGCTACACTTTCTGA  850

seq1  TGATTAAAGGTCTCCACTCTGTCCTTCCAAACTCTCCCCAACTCTGGTAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTAAAGGTCTCCACTCTGTCCTTCCAAACTCTCCCCAACTCTGGTAC  900

seq1  GGAGAATTC  909
      |||||||||
seq2  GGAGAATTC  909