BAC Information

Click to search

BAC

Clone NameB6Ng01-038L17
Chromosome4 (Build37)
Map Location 90,831,592 - 90,832,445
singlet/doubletsinglet
Overlap genenone
Upstream geneZfp352, LOC619842, LOC435792, Ppia-ps4_804.1, LOC664840, LOC664848
Downstream geneLOC100042274, Elavl2, LOC664864, LOC620016, LOC654475, 4930577H14Rik, LOC664886, 1700011H22Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-038L17.bB6Ng01-038L17.g
ACCDH866203DH866204
length8541,143
definitionDH866203|Mus musculus domesticus DNA, BAC clone: B6Ng01-038L17, 5' end.DH866204|Mus musculus domesticus DNA, BAC clone: B6Ng01-038L17, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctccgtttctgatccctatactttccaaaacaaacaaaaaaaaaa
aaacaaattttacttatttatttttgagacaaggtctcattataaagccc
aggttagcctggatctttctatgtggtccaggctagctttgaattgccta
tcttcatgcctcaacatgccaggtactgggattgcaggtatatgccacca
tgcatgtctgaaatatcttttaatctactgttctatgtcatcttactctg
agcctcaggactcatggcatgacatttgctgtaatactggtaaatgttga
gatttggtagagggccatggatttttttttaaattaattaatcaattaat
tcactttgcgtcacaattgctctcccctcctgctgccgcagcccctcctc
tgcgttttaagtggtcatcaggttcacacgcaccttccataaagcagact
agagccttccactcaacttgatttatactccacgttgcccatggatctag
gtgaggccttggaactgtttttttggcggatgggatgtgagcaaacatga
catgggaaaagtggccatatttctggtagtccatgctcatatccatgtac
agttttagaaagagaatggcaagccatattgcagagatatgcaatgtgtc
taggttactagattcctgtgtctgattaggagaatcatccaggagacctg
cccagactcttgaatgtggcattaatcggaaatgttcattatgtgaagcc
attgtagttcagagttgttccagttggtggtttactctgaggagtgtgtc
tgtctataaggatgctcgcatgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
tgtg
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatatactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacagggctccca
atggagagctagagaaagtacccaggagctaaaggatctcaccctatagt
gacacattatgactacagtaccctgagctcttgactctagctgcatatgt
atcaaagatgctagtcgcatcctgaagagagccatgactgcaaactttgt
ttgcctgtcagggaacgccaggctaaaggggggagtgtgtgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_90831592_90832445
seq2: B6Ng01-038L17.b_44_897 (reverse)

seq1  CACACACACACACACACACACACACACACACACATGCGAGCATCCTTATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACACATGCGAGCATCCTTATA  50

seq1  GACAGACACACTCCTCAGAGTAAACCACCAACTGGAACAACTCTGAACTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGACACACTCCTCAGAGTAAACCACCAACTGGAACAACTCTGAACTA  100

seq1  CAATGGCTTCACATAATGAACATTTCCGATTAATGCCACATTCAAGAGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGCTTCACATAATGAACATTTCCGATTAATGCCACATTCAAGAGTC  150

seq1  TGGGCAGGTCTCCTGGATGATTCTCCTAATCAGACACAGGAATCTAGTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCAGGTCTCCTGGATGATTCTCCTAATCAGACACAGGAATCTAGTAA  200

seq1  CCTAGACACATTGCATATCTCTGCAATATGGCTTGCCATTCTCTTTCTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGACACATTGCATATCTCTGCAATATGGCTTGCCATTCTCTTTCTAA  250

seq1  AACTGTACATGGATATGAGCATGGACTACCAGAAATATGGCCACTTTTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTACATGGATATGAGCATGGACTACCAGAAATATGGCCACTTTTCC  300

seq1  CATGTCATGTTTGCTCACATCCCATCCGCCAAAAAAACAGTTCCAAGGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTCATGTTTGCTCACATCCCATCCGCCAAAAAAACAGTTCCAAGGCC  350

seq1  TCACCTAGATCCATGGGCAACGTGGAGTATAAATCAAGTTGAGTGGAAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTAGATCCATGGGCAACGTGGAGTATAAATCAAGTTGAGTGGAAGG  400

seq1  CTCTAGTCTGCTTTATGGAAGGTGCGTGTGAACCTGATGACCACTTAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAGTCTGCTTTATGGAAGGTGCGTGTGAACCTGATGACCACTTAAAA  450

seq1  CGCAGAGGAGGGGCTGCGGCAGCAGGAGGGGAGAGCAATTGTGACGCAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCAGAGGAGGGGCTGCGGCAGCAGGAGGGGAGAGCAATTGTGACGCAAA  500

seq1  GTGAATTAATTGATTAATTAATTTAAAAAAAAATCCATGGCCCTCTACCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATTAATTGATTAATTAATTTAAAAAAAAATCCATGGCCCTCTACCA  550

seq1  AATCTCAACATTTACCAGTATTACAGCAAATGTCATGCCATGAGTCCTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTCAACATTTACCAGTATTACAGCAAATGTCATGCCATGAGTCCTGA  600

seq1  GGCTCAGAGTAAGATGACATAGAACAGTAGATTAAAAGATATTTCAGACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCAGAGTAAGATGACATAGAACAGTAGATTAAAAGATATTTCAGACA  650

seq1  TGCATGGTGGCATATACCTGCAATCCCAGTACCTGGCATGTTGAGGCATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGGTGGCATATACCTGCAATCCCAGTACCTGGCATGTTGAGGCATG  700

seq1  AAGATAGGCAATTCAAAGCTAGCCTGGACCACATAGAAAGATCCAGGCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATAGGCAATTCAAAGCTAGCCTGGACCACATAGAAAGATCCAGGCTA  750

seq1  ACCTGGGCTTTATAATGAGACCTTGTCTCAAAAATAAATAAGTAAAATTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGGGCTTTATAATGAGACCTTGTCTCAAAAATAAATAAGTAAAATTT  800

seq1  GTTTTTTTTTTTTTGTTTGTTTTGGAAAGTATAGGGATCAGAAACGGAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTTTTTTTTTGTTTGTTTTGGAAAGTATAGGGATCAGAAACGGAGA  850

seq1  ATTC  854
      ||||
seq2  ATTC  854