BAC Information

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BAC

Clone NameB6Ng01-039C02
Chromosome4 (Build37)
Map Location 149,391,972 - 149,552,158
singlet/doubletdoublet
Overlap geneGpr157, Slc2a5, LOC435818
Upstream genePex14, LOC670864, Dffa, Cort, Apitd1, LOC666774, Pgd, Kif1b, LOC100041794, Ube4b, Rbp7, LOC627985, Nmnat1, Lzic, Ctnnbip1, Clstn1, Pik3cd, D4Ertd429e, Slc25a33, Spsb1, H6pd
Downstream geneCar6, LOC100041882, Eno1, LOC666880, LOC384091, Rere, Slc45a1, LOC677027, Errfi1, Park7, Tnfrsf9, Uts2, Per3, Vamp3, Camta1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-039C02.bB6Ng01-039C02.g
ACCDH866485DH866486
length599364
definitionDH866485|Mus musculus domesticus DNA, BAC clone: B6Ng01-039C02, 5' end.DH866486|Mus musculus domesticus DNA, BAC clone: B6Ng01-039C02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(149,391,972 - 149,392,570)(149,551,789 - 149,552,158)
sequence
gaattccaacacttgggaggcaggtggatctctgcgagctgaggacaacc
cagtctacaaagcaagttgttgacagccagggctctgttaaacagataaa
gtctgtcttgaaaaaacaaaaacaaaaacaaaaagaacaataaaaggggg
ggggggtggacactcacacgagctgctcaggaggtaaagcaagcaagagg
ataattgaacagttgggcacaaaggagcacagtgtctgccatgaggaaca
gtgacccagagtaagcaggtctgtggatgggtagcgctccgggcaatgaa
gccccactcatccatttcccatcgctataatggaatacttgagactgctc
ctttataacagaagaggcttattggggtcgtagtttgaagggtcaagaac
atggcatcaattgggtcatgtggaggcgtacagatcccagagagacagga
agttaagcaatgcaagggacaggcttttccttttacaacaaactgcctta
gcaagagtaacaaggatgccacgagaactaccttaacaccccctgagggc
caagcacccgagggcctcacctccctcctgacagaaccacctgagaacc
actaaatacaccaggctggccctgaactcacagagatctgcctgcctcag
tttcttgagtgttgggatttaggtatatgccactctgcccacaaggcata
catgctgtgacacacatgtagagctcagtggacaacctctggaatcagct
caggagtagaactcaggtaccacacttggtggcaagagcggatacgtgct
gagccatctctccatccttaagaatttttttcagtaaatttcagccaata
aggcttgcttgggtttgaagtagccaaaagttagacatgatctgttttct
ttggaaatgaggacaggcctgaaattgtgtgtgtgtgtgtgtgtgtgtgt
gtgtgtgtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_149391972_149392570
seq2: B6Ng01-039C02.b_43_641

seq1  GAATTCCAACACTTGGGAGGCAGGTGGATCTCTGCGAGCTGAGGACAACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAACACTTGGGAGGCAGGTGGATCTCTGCGAGCTGAGGACAACC  50

seq1  CAGTCTACAAAGCAAGTTGTTGACAGCCAGGGCTCTGTTAAACAGATAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTACAAAGCAAGTTGTTGACAGCCAGGGCTCTGTTAAACAGATAAA  100

seq1  GTCTGTCTTGAAAAAACAAAAACAAAAACAAAAAGAACAATAAAAGGGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTCTTGAAAAAACAAAAACAAAAACAAAAAGAACAATAAAAGGGGG  150

seq1  GGGGGGTGGACACTCACACGAGCTGCTCAGGAGGTAAAGCAAGCAAGAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGGTGGACACTCACACGAGCTGCTCAGGAGGTAAAGCAAGCAAGAGG  200

seq1  ATAATTGAACAGTTGGGCACAAAGGAGCACAGTGTCTGCCATGAGGAACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTGAACAGTTGGGCACAAAGGAGCACAGTGTCTGCCATGAGGAACA  250

seq1  GTGACCCAGAGTAAGCAGGTCTGTGGATGGGTAGCGCTCCGGGCAATGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACCCAGAGTAAGCAGGTCTGTGGATGGGTAGCGCTCCGGGCAATGAA  300

seq1  GCCCCACTCATCCATTTCCCATCGCTATAATGGAATACTTGAGACTGCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCACTCATCCATTTCCCATCGCTATAATGGAATACTTGAGACTGCTC  350

seq1  CTTTATAACAGAAGAGGCTTATTGGGGTCGTAGTTTGAAGGGTCAAGAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATAACAGAAGAGGCTTATTGGGGTCGTAGTTTGAAGGGTCAAGAAC  400

seq1  ATGGCATCAATTGGGTCATGTGGAGGCGTACAGATCCCAGAGAGACAGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCATCAATTGGGTCATGTGGAGGCGTACAGATCCCAGAGAGACAGGA  450

seq1  AGTTAAGCAATGCAAGGGACAGGCTTTTCCTTTTACAACAAACTGCCTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAAGCAATGCAAGGGACAGGCTTTTCCTTTTACAACAAACTGCCTTA  500

seq1  GCAAGAGTAACAAGGATGCCACGAGAACTACCTTAACACCCCCTGAGGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGAGTAACAAGGATGCCACGAGAACTACCTTAACACCCCCTGAGGGC  550

seq1  CAAGCACCCGAGGGCCTCACCTCCCTCCTGACAGAACCACCTGAGAACC  599
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCACCCGAGGGCCTCACCTCCCTCCTGACAGAACCACCTGAGAACC  599

seq1: chr4_149551789_149552158
seq2: B6Ng01-039C02.g_67_436 (reverse)

seq1  ACACACACACACACACACACACACACACACACACACACAATTTCAGGCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACACACACACACAATTTCAGGCCT  50

seq1  GTCCTCATTTCCAAAGAAAACAGATCATGTCTAACTTTTGGCTACTTCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTCATTTCCAAAGAAAACAGATCATGTCTAACTTTTGGCTACTTCAA  100

seq1  ACCCAAGCAAGCCTTATTGGCTGAAATTTACTGAAAAAAATTCTTAAGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAAGCAAGCCTTATTGGCTGAAATTTACTGAAAAAAATTCTTAAGGA  150

seq1  TGGAGAGATGGCTCAGCACGTATCCGCTCTTGCCACCAAGTGTGGTACCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAGATGGCTCAGCACGTATCCGCTCTTGCCACCAAGTGTGGTACCT  200

seq1  GAGTTCTACTCCTGAGCTGATTCCAGAGGTTGTCCACTGAGCTCTACATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCTACTCCTGAGCTGATTCCAGAGGTTGTCCACTGAGCTCTACATG  250

seq1  TGTGTCACAGCATGTATGCCTTGTGGGCAGAGTGGCATATACCTAAATCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCACAGCATGTATGCCTTGTGGGCAGAGTGGCATATACCTAAATCC  300

seq1  CAACACTCAAGAAACTGAGGCAGGCAGATCTCTGTGAGTTCAGGGCCAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACACTCAAGAAACTGAGGCAGGCAGATCTCTGTGAGTTCAGGGCCAGC  350

seq1  CTGGTGTATTTAGTGAATTC  370
      ||||||||||||||||||||
seq2  CTGGTGTATTTAGTGAATTC  370