BAC Information

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BAC

Clone NameB6Ng01-039H15
Chromosome4 (Build37)
Map Location 95,067,049 - 95,067,615
singlet/doubletsinglet
Overlap genenone
Upstream gene5830433M19Rik, Plaa, LOC667250, Lrrc19, Ift74, Tek, 4930579C15Rik, LOC100039252, Mysm1, LOC100039265, LOC665029, Jun, LOC100042411
Downstream gene2310009E04Rik, Hook1, Cyp2j13, LOC242546, LOC546837, Cyp2j11
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-039H15.bB6Ng01-039H15.g
ACCDH866739DH866740
length1,098561
definitionDH866739|Mus musculus domesticus DNA, BAC clone: B6Ng01-039H15, 5' end.DH866740|Mus musculus domesticus DNA, BAC clone: B6Ng01-039H15, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatggaaagatattgtgtgaatttggttttatcatgaaatacttt
ggtttctccatctatggaaattgagagttttgttgggtatagtaccctgg
cctggcatttgtgttctcttagggtctgtataacatctgttcaggatttt
ctggctttcatagtctctgatgagaagtctggtgtaattctaattggcct
gcctttacatattacttgacctttcccccttactgcttttaatattctgt
ctttatttagtgcatttgttgttctgattattatgtgtcaggaggaattt
cttttctggtccagtttatttgaagttctgtaggcttcttgtatgttcat
gggcatctctttctttaagtttgggaagttttcttctataattttgttga
agatatttgctggccctttacgttgaaaatcttcattcttcattctactc
ctattatccgtaggtttggtcttctcaatgtgtcctggatttcctggatg
ttttgagttaggatctttttgcattttgcattttctttgattgttgtgcc
catgttctccatggaatcttctgcacctgagattctctcttccatctctt
gtattctgttgctgatgctcgcatctatggttcctgatttctttcctagg
atttctatctccagagttgtctcactttgggttttctttattgtttctac
tttcctttttaggtcttagatagttttgttcaattccatcacctgttttg
ttgtgttttcctataattctttaagggattttttttgtttcttctttaag
ggcttctacctgtttagcagtgttctcttgtaattctttaagtgagttat
caatacccttcttaaagtcctctacctgcatcatgagataggatttttaa
tctgaatcttggtttttggatgtgttggggtatccacgactggctgagtg
ggagtgctgggttctgatgatggtgagcggcctggtttcctgttaataaa
atttctacgtttgcctttccgtgaactctcgatttagtgttatagttgtc
tatggcgggagatcgttccacgtgtattttgtaacccctagagatcca
aaacatccctgaaacaggggctgaatgggtcacaattttgtattccccaa
gtttggcccatagtgggtgctccctgaatttgaaatgaaataaaactgac
ttgtgcaaagacaatagacaatgagtattgaaccgcaaggacttgagaaa
atgatttagcatgcttgaatgttgtagacgtagacatcatctcacacaga
agatactccgtcagactggggcaaagcaaagtcaagaatgatgcagacaa
aaactggggacaaaaagaaaaagaaacagaaggaaaagagaataaaaaag
aaaacataggggaaagacactaagtaaacttcaaaggaagacctaagggg
cctaacacctgagtgttcttaatgagtctgtgtgcagaagtgaaggaaac
actctgaaagcagggtctgaggactgaatagaacctatgacttttgcaac
caagggtcaaatgtgttgcagtcaagagtctgatgctaatggtcaaggta
cagaaggaaaatggcaacctgtggtcattagaggaattcaaatccaggag
ggagggaggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_95067049_95067615
seq2: B6Ng01-039H15.g_67_633 (reverse)

seq1  TCCCTCCCTCCCTCCTGGATTTGAATTCCTCTAATGACCACAGGTTGCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCCCTCCCTCCTGGATTTGAATTCCTCTAATGACCACAGGTTGCCA  50

seq1  TTTTCCTTCTGTACCTTGACCATTAGCATCAGACTCTTGACTGCAACACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTTCTGTACCTTGACCATTAGCATCAGACTCTTGACTGCAACACA  100

seq1  TTTGACCCTTGGTTGCAAAAGTCATAGGTTCTATTCAGTCCTCAGACCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGACCCTTGGTTGCAAAAGTCATAGGTTCTATTCAGTCCTCAGACCCT  150

seq1  GCTTTCAGAGTGTTTCCTTCACTTCTGCACACAGACTCATTAAGAACACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCAGAGTGTTTCCTTCACTTCTGCACACAGACTCATTAAGAACACT  200

seq1  CAGGTGTTAGGCCCCTTAGGTCTTCCTTTGAAGTTTACTTAGTGTCTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGTTAGGCCCCTTAGGTCTTCCTTTGAAGTTTACTTAGTGTCTTTC  250

seq1  CCCTATGTTTTCTTTTTTATTCTCTTTTCCTTCTGTTTCTTTTTCTTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTATGTTTTCTTTTTTATTCTCTTTTCCTTCTGTTTCTTTTTCTTTTT  300

seq1  GTCCCCAGTTTTTGTCTGCATCATTCTTGACTTTGCTTTGCCCCAGTCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCCAGTTTTTGTCTGCATCATTCTTGACTTTGCTTTGCCCCAGTCTG  350

seq1  ACGGAGTATCTTCTGTGTGAGATGATGTCTACGTCTACAACATTCAAGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGAGTATCTTCTGTGTGAGATGATGTCTACGTCTACAACATTCAAGCA  400

seq1  TGCTAAATCATTTTCTCAAGTCCTTGCGGTTCAATACTCATTGTCTATTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAAATCATTTTCTCAAGTCCTTGCGGTTCAATACTCATTGTCTATTG  450

seq1  TCTTTGCACAAGTCAGTTTTATTTCATTTCAAATTCAGGGAGCACCCACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGCACAAGTCAGTTTTATTTCATTTCAAATTCAGGGAGCACCCACT  500

seq1  CTGGGCCAAACTTCGGGAATACAAAATTGTGAACCATTCAGCCCCTGTTT  550
       |||||||||||| |||||||||||||||||| |||||||||||||||||
seq2  ATGGGCCAAACTTGGGGAATACAAAATTGTGACCCATTCAGCCCCTGTTT  550

seq1  CAGGGATGTTTGAATTC  567
      |||||||||||||||||
seq2  CAGGGATGTTTGAATTC  567