MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-039H16
Chromosome	4 (Build37)
Map Location	26,292,384 - 26,293,520
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC625732, Fut9, LOC100040780, Hn1-ps1, Manea
Downstream gene	Bhmt-ps1, LOC665079, Gng2-ps1
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC625732 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:625732
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs, 4 Proteins pseudo : _no_value

name	Fut9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14348 MGI:1330859
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040780 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040780
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs

name	Hn1-ps1 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:546829
definition	note : hematological and neurological expressed 1 pseudogene 1 pseudo : _no_value

name	Manea (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:242362 MGI:2444484
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Bhmt-ps1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:57421 MGI:1888909
definition	note : betaine-homocysteine methyltransferase, pseudogene 1 pseudo : _no_value

name	LOC665079 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665079
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Gng2-ps1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14703 MGI:1336164
definition	note : guanine nucleotide binding protein (G protein), gamma 2 subunit, pseudogene 1 pseudo : _no_value

name	Fut9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84794634 GeneID:14348 MGI:1330859
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : fucosyltransferase 9 transcript_id : NM_010243.3

name	LOC100040780 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252125 GeneID:100040780
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs product : hypothetical protein LOC100040780 transcript_id : XM_001475339.1

name	Manea (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46048328 GeneID:242362 MGI:2444484
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mannosidase, endo-alpha transcript_id : NM_172865.2

name	Fut9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753922 CCDS:CCDS18011.1 GeneID:14348 MGI:1330859
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0046920 - alpha(1,3)-fucosyltransferase activity [Evidence IDA]; GO:0008417 - fucosyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA] GO_process : GO:0006486 - protein amino acid glycosylation [Evidence IDA] codon_start : 1 product : fucosyltransferase 9 protein_id : NP_034373.1

name	LOC100040780 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149252126 GeneID:100040780
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475389.1

name	Manea (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46048329 CCDS:CCDS18012.1 GeneID:242362 MGI:2444484
definition	GO_function : GO:0003824 - catalytic activity [Evidence IEA]; GO:0043169 - cation binding [Evidence IEA] GO_process : GO:0005975 - carbohydrate metabolism [Evidence IEA] codon_start : 1 product : mannosidase, endo-alpha protein_id : NP_766453.2

name	LOC665079 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665079
definition	number : 1 pseudo : _no_value

name	LOC665079 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665079
definition	number : 2 pseudo : _no_value

name	LOC625732 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149252124 GeneID:625732
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs, 4 Proteins product : similar to prostaglandin E synthase 3 (cytosolic) pseudo : _no_value transcript_id : XR_032170.1

clone name	MSMg01-270H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-430L04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424B24
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-477J02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-405P04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-084L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-086J19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-355A03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-235J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-295L13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422O15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-469B01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-323L16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-099H04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-104A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-132K19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-119O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-341G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-182C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-290D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-277P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-115J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-268L22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-135D09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-422F23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-457F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-441L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-446O24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452E21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-511L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500K17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340M21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-352E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-351C08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-106P01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422N07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-154L17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-150J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-265H10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-408J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-443M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136K08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-325O05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-527B20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-268P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-117F16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-493P05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-321N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435L24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-474P10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-326A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-365B11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-501G07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457J18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-146D07
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-495N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-507O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-128C03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-534H18
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-331E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-367P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-130I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-307I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-525P13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423O24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-297E22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-213D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-208J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-355P23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-289G17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-234H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-318O11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528D23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-297P01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-103I12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-081C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-082J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158G02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059P20
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-488K17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-519L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-146F08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-119D01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-242H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282L06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-157M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-255I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247H03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-165M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-193P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046A19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111A06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212O24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207H01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-214N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349M22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-053O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-140N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-330E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215K01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205L08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151M18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-163L06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-175N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-197N11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-123B06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-158N15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130N23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-265E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257J21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184C07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-330A04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177P10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180M02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-315H15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-155O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-315P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039H16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-095I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-294O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211E24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-136P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061H24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138H01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-184E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263D09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018E07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041D13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-053F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-206G21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-214F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033K15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-244N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-139F02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-220L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247P20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-062F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002J23
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-039H16.b	B6Ng01-039H16.g
ACC	DH866741	DH866742
length	1,132	1,124
definition	DH866741\|Mus musculus domesticus DNA, BAC clone: B6Ng01-039H16, 5' end.	DH866742\|Mus musculus domesticus DNA, BAC clone: B6Ng01-039H16, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattcctaaacttaacaaacagcatcaacaaagtagctggatataaaat taactgaaaccaatcagtagccttcctcttctcaaaggataaccaggctg agaaagaaattttggaaatgatggacaccctttacaatagtcacaaataa tataaaacaactgggtgtgatactaaccaagcaagggaaagatctgtatg acaaaaactttaagtccctgaatagaaaaaacaaagatctcagaagatgg aaaaatctccctgtcatttcttttttttttttttcttttttccctaaagg acacaatctcatggcaaacttgctgcttctcttgtatttacaatccttct gcatcctcttctctgatgttccttgagcttcaggttcagcagttgtgttg tagatttatccattgggcctgataactgaccatcaattttttttccccat tctgattaatagtggttttctgtaatgatacatttctactgtatgtagaa gcttctatgttgaaggatgagagttattcttatatgttagtataagaata actatttagaatatagttaagaattacttatgctggtttagtaaagtatc agtagtgagttctctaccatgacctccctgagtactggctacttttcagt accaggcatgactttctcatgctgactggaccttcagttcaattaaacac ttattggttacccaggtatgagtaatactttggcatttttagggatattg tgtagttattgttttgattcacaaatatcaatgttaggcaatattattgg ctatttcccttctttggtaggttgtgtagcccctctgtactttgaaagct aatctttaggaagaaagtatttcagcacagatccagcccaaatcttgagt ccattttctaaactgcacagtgtcttcagcaactgtcatttacctttaac ttctcagaggcaaccatggacatatcagtagctatgtgatttaaagtttc tggtctccctctgagcaacacttataaacacttaatagagggtctggcat ctggtatgagggttttgttttgttttgctgttcctttgcttatcttgatt attaagaagttggggctcggggggggagggaa	gaattcagttaatcaaaaatttctgaagagttcctatgtgcaagaaatta ttctacgtgtcataaaatatacatataaatgaagaaacactttttctaca gtaactcttttaatatagagacatgtacaattataattaaatgatcaaaa cattgccatatagattattaataacaacagttaatctttataggttgaag agaatggcaagctcctagaatacataaatttactctaatctaataaagga taacagtaggatgccccaaaattaaaaaaataatcaaaagaaaccgataa tcatgaagatatcttaatatatcttaaggtagtagaaagataggaaattt ggataatatgggcaaaaagcatgctgagatgctgagtggcaaatgattct actctcgagatgtatcctgcttgtcctactaagaaaggcaaaatatttta atagtgctaataaatcctaaattgctcatggagacaatttatgtttttac aaaggaaatcttatgcttactcaggaccaaaatgatgtatacacttgagt tccttgcacttctttctcattcccagatttaaacgatacctcccataaat atactatataaccccatacacagaagaaagtttctcaatataactttctt gtaacctagattttttctatgttaaaaaacataaggattattcttatcca tctcatatctcatatatcctcagagtttccaagaactaaaccaccaacca aaaagtaagtacagatgggctggctgccagagcatgtgggagagccatct tgtgtcccgggtccctcagacaccagtctgctcaggagagcctgcagact gcagaagcaacatagcttctgggacaggccccagttctggccttcatctg aatccaggaagcagatctaagctccagacacctaccctccttccccacca gagagggtgccagccaggaagggctcaagtgctagagcatcttgtgtccg gtcatcagagaccagtctgctcaggtctactcctgctgagtgcagagcaa catagcttctgggacaggccctgtcagactcatcttcagcaggaggcaga gctgagctccagaatcttgctctt
quality values	Open. 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Hide. 61 59 59 59 61 59 49 19 43 21 26 26 28 28 26 32 37 59 61 61 61 61 61 61 59 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 43 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 55 59 61 55 44 59 61 61 59 61 61 61 61 61 61 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 59 59 59 61 61 61 59 59 61 61 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 59 61 61 59 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 53 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 53 61 53 53 61 61 61 61 61 47 53 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 47 47 46 53 53 53 52 53 53 53 57 57 42 47 47 53 53 53 57 57 53 53 43 47 57 52 53 52 57 57 57 57 57 57 53 57 57 57 52 53 46 43 57 53 53 50 53 50 57 57 57 57 53 53 50 50 57 57 50 52 53 57 57 57 57 53 53 50 53 53 53 47 43 50 39 39 53 42 53 53 53 52 50 50 52 47 42 53 42 53 39 50 50 52 47 53 53 52 52 52 41 39 38 52 53 52 50 50 50 38 53 39 38 50 50 47 43 26 46 43 57 34 36 50 50 52 47 44 53 40 50 47 39 37 53 52 38 53 57 57 53 47 38 18 26 36 50 40 52 38 28 52 35 40 57 14 33 42 38 35 27 42 37 52 37 21 33 52 21 44 28 36 40 34 53 46 35 53 23 53 14 33 52 29 42 40 37 26 52 35 52 36 27 53 29 31 45 46 18 23 45 37 40 36 33 20 40 22 34 40 37 37 35 48 41 34 47 28 33 35 20 19 18 40 18 44 10 30 23 29 32 26 29 13 32 24 32 41 17 30 17 45 13 12 32 24 24 30 28 38 36 34 24 16 29 28 25 29 46 24 29 14 29 28 41 21 38 32 24 24 28 29 45 25 27 38 36 30 25 28 31 26 31 35 28 29 28 31 31 31 24 24 26 29 21 38 32 11 20 29 15 34 23 26 29 26 29 12 24 29 23 29 15 14 34 13 20 26 14 23 29 29 41 30 34 28 23 33 28 29 31 29 29 29 23 28 28 19 24 20 13 14 29 27 16 27 18 24 19 28 25 29 21 22 9 26 18 29 44 11 18 27 28 22 22 28 29 29 21 29 25 21 43 16 51 14 26 17 28 10 34 23 19 19 22 14 32 33 19 38 20 31 27 13 7 31 8 31 16 16 25 19 30 29 31 28 14 16 19 22 22 17 8 19 24 18 23 22 9 33 23 34 17 20 15 26 9 13 33 6 4 4 30 9 33 27 11 9 6 20 23 12 20 28 5 14 8 20 31 14 14 8 19 19 9 17 30 18 4 3 5 3 9 9 16 8 6 3 5 10 10 12 17 16 23 5 14 11 26 11 7 6 30 9 5 6 20 13 11 24 9 25 9 14 5 6 23 9 11 12 3 2 4 4 5 4 3 6 6 24 15

Alignment Information

BAC End 1

BAC End 2

seq1: chr4_26292384_26293520
seq2: B6Ng01-039H16.g_65_1188 (reverse)

seq1  AAGAGCACAGATGTCTGGAGCTCAGCTCTGCCTCCTGGCTGAAGATGAAG  50
      ||||||| |||| ||||||||||||||||||||||| |||||||||||  
seq2  AAGAGCA-AGAT-TCTGGAGCTCAGCTCTGCCTCCT-GCTGAAGATGA--  45

seq1  GTCTGAACAGGGGCCTGTCCCAGAAGCTATGTTGCTTCTGCACTCAGCAG  100
      ||||| ||| ||||||||||||||||||||||||| ||||||||||||||
seq2  GTCTG-ACA-GGGCCTGTCCCAGAAGCTATGTTGC-TCTGCACTCAGCAG  92

seq1  GAGTAGACCTGAGCAGACTGGTCTCTGATGGACCCGGACACAAGATGGCT  150
      ||||||||||||||||||||||||||||||   ||||||||||||| |||
seq2  GAGTAGACCTGAGCAGACTGGTCTCTGATG--ACCGGACACAAGAT-GCT  139

seq1  CTAGCACTTGAGCCCTTCCTGGCTGGCACCCCTCCTCTGGTGGGGAAGGA  200
      |||||||||||||||||||||||||||||||   ||||||||||||||||
seq2  CTAGCACTTGAGCCCTTCCTGGCTGGCACCC--TCTCTGGTGGGGAAGGA  187

seq1  GGGTAGGTGTCTGGAGCTTAGATCTGCTTCCTGGATTCAGATGAAGGCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAGGTGTCTGGAGCTTAGATCTGCTTCCTGGATTCAGATGAAGGCCA  237

seq1  GAACTGGGGCCTGTCCCAGAAGCTATGTTGCTTCTGCAGTCTGCAGGCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGGGGCCTGTCCCAGAAGCTATGTTGCTTCTGCAGTCTGCAGGCTC  287

seq1  TCCTGAGCAGACTGGTGTCTGAGGGACCCGGGACACAAGATGGCTCTCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGAGCAGACTGGTGTCTGAGGGACCCGGGACACAAGATGGCTCTCCC  337

seq1  ACATGCTCTGGCAGCCAGCCCATCTGTACTTACTTTTTGGTTGGTGGTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCTCTGGCAGCCAGCCCATCTGTACTTACTTTTTGGTTGGTGGTTT  387

seq1  AGTTCTTGGAAACTCTGAGGATATATGAGATATGAGATGGATAAGAATAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTTGGAAACTCTGAGGATATATGAGATATGAGATGGATAAGAATAA  437

seq1  TCCTTATGTTTTTTAACATAGAAAAAATCTAGGTTACAAGAAAGTTATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTATGTTTTTTAACATAGAAAAAATCTAGGTTACAAGAAAGTTATAT  487

seq1  TGAGAAACTTTCTTCTGTGTATGGGGTTATATAGTATATTTATGGGAGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAACTTTCTTCTGTGTATGGGGTTATATAGTATATTTATGGGAGGT  537

seq1  ATCGTTTAAATCTGGGAATGAGAAAGAAGTGCAAGGAACTCAAGTGTATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGTTTAAATCTGGGAATGAGAAAGAAGTGCAAGGAACTCAAGTGTATA  587

seq1  CATCATTTTGGTCCTGAGTAAGCATAAGATTTCCTTTGTAAAAACATAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATTTTGGTCCTGAGTAAGCATAAGATTTCCTTTGTAAAAACATAAA  637

seq1  TTGTCTCCATGAGCAATTTAGGATTTATTAGCACTATTAAAATATTTTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTCCATGAGCAATTTAGGATTTATTAGCACTATTAAAATATTTTGC  687

seq1  CTTTCTTAGTAGGACAAGCAGGATACATCTCGAGAGTAGAATCATTTGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTAGTAGGACAAGCAGGATACATCTCGAGAGTAGAATCATTTGCC  737

seq1  ACTCAGCATCTCAGCATGCTTTTTGCCCATATTATCCAAATTTCCTATCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGCATCTCAGCATGCTTTTTGCCCATATTATCCAAATTTCCTATCT  787

seq1  TTCTACTACCTTAAGATATATTAAGATATCTTCATGATTATCGGTTTCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACTACCTTAAGATATATTAAGATATCTTCATGATTATCGGTTTCTT  837

seq1  TTGATTATTTTTTTAATTTTGGGGCATCCTACTGTTATCCTTTATTAGAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTATTTTTTTAATTTTGGGGCATCCTACTGTTATCCTTTATTAGAT  887

seq1  TAGAGTAAATTTATGTATTCTAGGAGCTTGCCATTCTCTTCAACCTATAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGTAAATTTATGTATTCTAGGAGCTTGCCATTCTCTTCAACCTATAA  937

seq1  AGATTAACTGTTGTTATTAATAATCTATATGGCAATGTTTTGATCATTTA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTAACTGTTGTTATTAATAATCTATATGGCAATGTTTTGATCATTTA  987

seq1  ATTATAATTGTACATGTCTCTATATTAAAAGAGTTACTGTAGAAAAAGTG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATAATTGTACATGTCTCTATATTAAAAGAGTTACTGTAGAAAAAGTG  1037

seq1  TTTCTTCATTTATATGTATATTTTATGACACGTAGAATAATTTCTTGCAC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTCATTTATATGTATATTTTATGACACGTAGAATAATTTCTTGCAC  1087

seq1  ATAGGAACTCTTCAGAAATTTTTGATTAACTGAATTC  1137
      |||||||||||||||||||||||||||||||||||||
seq2  ATAGGAACTCTTCAGAAATTTTTGATTAACTGAATTC  1124

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information