BAC Information

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BAC

Clone NameB6Ng01-041E17
Chromosome4 (Build37)
Map Location 137,730,591 - 137,896,187
singlet/doubletdoublet
Overlap geneEif4g3, Hp1bp3, Kif17, Ddost, Pink1, Cda
Upstream geneWnt4, Cdc42, LOC665533, LOC242711, Ela3, 1700013G24Rik, Hspg2, Ldlrad2, Usp48, Rap1gap, Akp2, Ece1, LOC100040558
Downstream geneLOC625638, LOC625646, 0610009K11Rik, Camk2n1, LOC100040618, 4931403E03Rik, Ubxd3, Pla2g2c, Pla2g2f, Pla2g2d, Pla2g5, Pla2g2a, Pla2g2e, Otud3, Rnf186, Tmco4, Htr6, LOC665683, Nbl1, 2310028O11Rik, Hspe1-ps4, 9530077C14Rik, Capzb, Pqlc2, LOC100042808, Akr7a5, LOC625977
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-041E17.bB6Ng01-041E17.g
ACCDH867996DH867997
length851871
definitionDH867996|Mus musculus domesticus DNA, BAC clone: B6Ng01-041E17, 5' end.DH867997|Mus musculus domesticus DNA, BAC clone: B6Ng01-041E17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(137,895,338 - 137,896,187)(137,730,591 - 137,731,463)
sequence
gaattccattgctttcaaaccaccacagctgattgatagcactaagtctg
tttctccaatagtgaaaggaatgtaatgacagccaccacctccagggggc
gataatgctataatgtcaacatagtgtgttgagtgtcctgaaagagacaa
aaattccttcttggaggtacaaaggggaacctgtagagggcagcgggtgt
tggctgtcatttgccattgcagaaggaagcttagctctggggcatagact
ttgaaaaaagatttaatttttaattatgtctgtgccaagatgtgcatttt
aaacacagttgcccacgaaggccagagcatcagatcttcgtggagctgga
gttagaggaaatcgtgggcttcccagtgtaggggttggagataaactcgg
ctcctctgcatgaattctgagtgctcttaactgccgagccatctcttaac
tgccgagccatctctgcagcccaaggcacagatatttcaaccggtgctag
gaagcgatttcagtggttaaactcttgcatatttaaccctcgaggaccag
agtttgcatccctagaaacccaggtgatctgggcagatgcctgcaattcc
agacttggaaggcggagacaggggatccccacagcaaagtggctggctgg
actagtgatatggccgagctctgggtttgatagagagaggctgcctctgt
gaataaggcagaggagccatgaaagatgattcgggacccaacccttgggc
ttccacatgcatgtttacccatatgcgcccccccctcacatgcatacaaa
cacgtgtataccacacatacattaaaacataaagaagggttttttgtttt
t
gaattcagtactggtcagtgagactcaagctttctaaactgaacagctgg
agtctcctctccacagtgaacatgttgaactcataagccatgtgtttgat
ttctacaatgatgctattgctgtccttcagaccgtaccacagttcagtga
gataagtgtctccattgaaactcatgggcaccctgtcatcccggctgcca
tgtttatctgcctcagctggaagcactgccccttcattcctctcagttct
tagggcaccaatgaggcttctttgtcttgctaaacccaggtataatctta
gtagcaaaagctgtgacctgttgctcagagctccctcacaagctaaattc
aaccattttccacccatgtctccaccatatttgctcatttcggccattgg
aatggaggctgggatggagtgaggcaagttttgtctcctgagaagagaga
agcagctttgtgtggcattctgggtagggtaccagagtcatagtaaagga
agaaaaatgattgtcccctttgatttagagctgctgtgaaccaatacatg
aactgattattagcccctcatgtcacacagtcctgaagaatctcccttct
tcctggcccacttcctttctctcctagttcgtcagccatcctggcagctg
catcagccacttcttccttctgacgcttacccttcagttgttggaatgtg
cgctgcacaccccgccagtgttcatttccatagcttgaaatcctacagta
cccctgtcatccgtgacaagctgaggggcttacttctccacttagcaaga
tatttaatatggtttatgcagtggaaaagtagacgcttttcctttttgga
gtttgggtattaccaggtttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_137895338_137896187
seq2: B6Ng01-041E17.b_37_887 (reverse)

seq1  AAAAACAAAAAACCCTTCTCTCTGTTTTCATGTATGTGTGGTATACACGT  50
      ||||||||||||||||||| | |||||| |||||||||||||||||||||
seq2  AAAAACAAAAAACCCTTCTTTATGTTTTAATGTATGTGTGGTATACACGT  50

seq1  GTTTGTATGCATGTGA-GGGGGGGCGCATATGGGTAAACATGCATGTGGA  99
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GTTTGTATGCATGTGAGGGGGGGGCGCATATGGGTAAACATGCATGTGGA  100

seq1  AGCCCAAGGGTTGGGTCCCGAATCATCCTTCATGGCTCCTCTGCCTTATT  149
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  AGCCCAAGGGTTGGGTCCCGAATCATCTTTCATGGCTCCTCTGCCTTATT  150

seq1  CACAGAGGCAGCGTCTCTCTATCAAACCCAGAGCTCGGCCATATCACTAG  199
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CACAGAGGCAGCCTCTCTCTATCAAACCCAGAGCTCGGCCATATCACTAG  200

seq1  TCCAGCCAGCCACTTTGCTGTGGGGATCCCCTGTCTCCGCCTTCCAAGTC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCCAGCCACTTTGCTGTGGGGATCCCCTGTCTCCGCCTTCCAAGTC  250

seq1  TGGAATTGCAGGCATCTGCCCAGATCACCTGGGTTTCTAGGGATGCAAAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATTGCAGGCATCTGCCCAGATCACCTGGGTTTCTAGGGATGCAAAC  300

seq1  TCTGGTCCTCGAGGGTTAAATATGCAAGAGTTTAACCACTGAAATCGCTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTCCTCGAGGGTTAAATATGCAAGAGTTTAACCACTGAAATCGCTT  350

seq1  CCTAGCACCGGTTGAAATATCTGTGCCTTGGGCTGCAGAGATGGCTCGGC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGCACCGGTTGAAATATCTGTGCCTTGGGCTGCAGAGATGGCTCGGC  400

seq1  AGTTAAGAGATGGCTCGGCAGTTAAGAGCACTCAGAATTCTTGCAGAGGA  449
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AGTTAAGAGATGGCTCGGCAGTTAAGAGCACTCAGAATTCATGCAGAGGA  450

seq1  GCCGAGTTTATCTCCAACCCCTACACTGGGAAGCCCACGATTTCCTCTAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGAGTTTATCTCCAACCCCTACACTGGGAAGCCCACGATTTCCTCTAA  500

seq1  CTCCAGCTCCACGAAGATCTGATGCTCTGGCCTTCGTGGGCAACTGTGTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGCTCCACGAAGATCTGATGCTCTGGCCTTCGTGGGCAACTGTGTT  550

seq1  TAAAATGCACATCTTGGCACAGACATAATTAAAAATTAAATCTTTTTTCA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATGCACATCTTGGCACAGACATAATTAAAAATTAAATCTTTTTTCA  600

seq1  AAGTCTATGCCCCAGAGCTAAGCTTCCTTCTGCAATGGCAAATGACAGCC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTATGCCCCAGAGCTAAGCTTCCTTCTGCAATGGCAAATGACAGCC  650

seq1  AACACCCGCTGCCCTCTACAGGTTCCCCTTTGTACCTCCAAGAAGGAATT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACCCGCTGCCCTCTACAGGTTCCCCTTTGTACCTCCAAGAAGGAATT  700

seq1  TTTGTCTCTTTCAGGACACTCAACACACTATGTTGACATTATAGCATTAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCTCTTTCAGGACACTCAACACACTATGTTGACATTATAGCATTAT  750

seq1  CGCCCCCTGGAGGTGGTGGCTGTCATTACATTCCTTTCACTATTGGAGAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCCCCTGGAGGTGGTGGCTGTCATTACATTCCTTTCACTATTGGAGAA  800

seq1  ACAGACTTAGTGCTATCAATCAGCTGTGGTGGTTTGAAAGCAATGGAATT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACTTAGTGCTATCAATCAGCTGTGGTGGTTTGAAAGCAATGGAATT  850

seq1  C  850
      |
seq2  C  851

seq1: chr4_137730591_137731463
seq2: B6Ng01-041E17.g_68_938

seq1  GAATTCAGTACTGGTCAGTGAGACTCAGGCTTTCTAAACTGAACAGCTGG  50
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  GAATTCAGTACTGGTCAGTGAGACTCAAGCTTTCTAAACTGAACAGCTGG  50

seq1  AGTCTCCTCTCCACAGTGAACATGTTGAACTCATAAGCCATGTGTTTGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTCCTCTCCACAGTGAACATGTTGAACTCATAAGCCATGTGTTTGAT  100

seq1  TTCTACAATGATGCTATTGCTGTCCTTCAGACCGTACCACAGTTCAGTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACAATGATGCTATTGCTGTCCTTCAGACCGTACCACAGTTCAGTGA  150

seq1  GATAAGTGTCTCCATTGAAACTCATGGGCACCCTGTCATCCCGGCTGCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAGTGTCTCCATTGAAACTCATGGGCACCCTGTCATCCCGGCTGCCA  200

seq1  TGTTTATCTGCCTCAGCTGGAAGCACTGCCCCTTCATTCCTCTCAGTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTATCTGCCTCAGCTGGAAGCACTGCCCCTTCATTCCTCTCAGTTCT  250

seq1  TAGGGCACCAATGAGGCTTCTTTGTCTTGCTAAACCCAGGTATAATCTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGCACCAATGAGGCTTCTTTGTCTTGCTAAACCCAGGTATAATCTTA  300

seq1  GTAGCAAAAGCTGTGACCTGTTGCTCAGAGCTCCCTCACAAGCTAAATTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCAAAAGCTGTGACCTGTTGCTCAGAGCTCCCTCACAAGCTAAATTC  350

seq1  AACCATTTTCCACCCATGTCTCCACCATATTTGCTCATTTCGGCCATTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATTTTCCACCCATGTCTCCACCATATTTGCTCATTTCGGCCATTGG  400

seq1  AATGGAGGCTGGGATGGAGTGAGGCAAGTTTTGTCTCCTGAGAAGAGAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAGGCTGGGATGGAGTGAGGCAAGTTTTGTCTCCTGAGAAGAGAGA  450

seq1  AGCAGCTTTGTGTGGCATTCTGGGTAGGGTACCAGAGTCATAGTAAAGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCTTTGTGTGGCATTCTGGGTAGGGTACCAGAGTCATAGTAAAGGA  500

seq1  AGAAAAATGATTGTCCCCTTTGATTTAGAGCTGCTGTGAACCAAGACATG  550
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  AGAAAAATGATTGTCCCCTTTGATTTAGAGCTGCTGTGAACCAATACATG  550

seq1  AACTGAGTATTAGCCCCTCATGTCACACAGTCCTGAAGAATCTCCCTTCT  600
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGATTATTAGCCCCTCATGTCACACAGTCCTGAAGAATCTCCCTTCT  600

seq1  TCCTGGCCCACTTCCTTTCTCTCCTAGTTCGTCAGCCATCCTGGCAGCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGCCCACTTCCTTTCTCTCCTAGTTCGTCAGCCATCCTGGCAGCTG  650

seq1  CATCAGCCACTTCTTCCTTCTGACGCTTACCCTTCAGTTGTTGGAATGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGCCACTTCTTCCTTCTGACGCTTACCCTTCAGTTGTTGGAATGTG  700

seq1  CGCTGCACACCCCGCCAGTGTTCATTTCCTTAGCTTGAAATCCTACAGTA  750
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CGCTGCACACCCCGCCAGTGTTCATTTCCATAGCTTGAAATCCTACAGTA  750

seq1  CCCCTGTCATCCGTGACAAGCTGAGGGGCTTACTTCTCCACTTAGCAAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTGTCATCCGTGACAAGCTGAGGGGCTTACTTCTCCACTTAGCAAGA  800

seq1  TATTTTATATGGTTTATGCAGTGGAAAAGTAGACGCTTTTTCCTTTTTGG  850
      ||||| |||||||||||||||||||||||||||||| |||||||||||||
seq2  TATTTAATATGGTTTATGCAGTGGAAAAGTAGACGC-TTTTCCTTTTTGG  849

seq1  AGCTTGGGGTATTACCAGGTTTC  873
      || || |||||||||||||||||
seq2  AG-TTTGGGTATTACCAGGTTTC  871