BAC Information

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BAC

Clone NameB6Ng01-041G05
Chromosome4 (Build37)
Map Location 15,939,024 - 15,940,000
singlet/doubletsinglet
Overlap geneOsgin2
Upstream geneEfcbp1, Tmem64, LOC100040095, LOC633695, Calb1, Decr1, Nbn
Downstream geneRipk2, LOC667150, LOC383994, LOC100040154
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-041G05.bB6Ng01-041G05.g
ACCDH868067DH868068
length1,251974
definitionDH868067|Mus musculus domesticus DNA, BAC clone: B6Ng01-041G05, 5' end.DH868068|Mus musculus domesticus DNA, BAC clone: B6Ng01-041G05, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttaatccacttagatttgatcttagtacaaggagataggaatg
gatcaattcgcattcttcaaccaaattatagaagaaaacttccctaacct
aaagaaagtgatgagctagaacatacaagaagcctacagaacttcaaaca
gactggaccagaaaaaaattcctcctgtcacataataatcaaaacatcaa
acgcacaaaacaaagaaaggattttaaaagcagtaaaggaaaaaggtcaa
atagcatataaaggcagacctatcacaattacaccagatttcttccaaag
attataaaagccagaaaatcctggacagacatcaaacagaccctaagaga
acacaaatggcagcccagcaaaactctcaattaacacagatggagaaacc
aaggtactccacgacaaaactaaatttacacaatatctttccacaaatcc
agcccttcaaaggaaaataaatggaaactgccaacacaatgagggaaatt
acaccctagaaaaaacatgaaaataatcttcatttaacaaacaaaaagaa
gatagccacataatcataattccacctctaacaacaaaaataacaggaag
caacaatcacatttccttaatatcccttaatatcaatagactcaatatcc
caataaaaagacatagactaacagactggctacataaacaggacccaaca
ttttgctgcttataggaaacctacctcagggacaaagacagacactacct
cagagtaaaagactggaaaataattctccaagcaaatggtcccaagaaac
aaaatggaatagccattctaataacaagtaaaattgactttcaaccaaaa
gttatcaaaaatataaagaaggacacttcatactcatcaagggaaaatct
accaagaaaaactctcaattttgaacatctatgctcctaatgcaagagca
ccacattcataaaggaactttactaaagctcaaagcacacattacacctc
acacacttataatggaaacttcagaccccactcctcatcatgaagatccg
aaaacagaaactaacaaagaccagcgaacttaaagtggtgacaaatgatt
taatatctagaacagttattcctaaacaaagaaataactgtctttagctc
tccaggtatccttctattgtcaatatcagtccaacggctcaaggatcaaa
gctgattaccgagctcatcagatcaatggactaggcggctccataccaaa
c
gaattcacagcctgatcccctgccaaagccatggaaaaaggagaaaccct
gaagctctgtacactggtcagccagtttgagagtcctgtcaagacaaggt
taatgatatccttgccaatggtgtagttgccaggggcacagttataggca
gcatcttccttgcctgtgatgagctgagctgctcagggtagaaaagctgg
cagtaggtaccagtgcgcaattcatcaatagctatgcattccaggtctac
gatcactgcccagggcacatgcttgctagtgcctgtctcactgaaggaga
tcctcaaagagtcatctcttccccaatgatcatgtcacttggcatgtggc
catcaggttagatgccattttcctagcagtagagctgccagtaggcattt
cccatctggacatcagcctggccaacatttatggagatgcactcacacat
ggatgctacttgaggctgctgaatgaatgggggaagacaaggaagcagta
cttcttatagcttgactcttaaaaggtctctaatgatacatttaactata
ataatgtagcaaacacggtttcttctctcccaacactaaactgtagcaaa
cacttttcactccctcccctaaatttctctgcacagagataaagaggatg
gatggtatttaccacatagcctcagagtaagaattccaagctctcccctt
accgctcaacagtacccccaaaggtgtcaggagactttcagagggttatt
ttctaaaagaaatgtagctccccaagaggcttcaaattttcactccagcc
tgctttttacaaactcaaagtggacgatgtgtacatacacaacaatctgt
ctagaacataaaatcccagcagtctttggcataaaactttctagatctgg
atataaagtctccttcatctcggaggttgggcagacctaggtctttgctt
tttacgcaggagtcagatttctct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_15939024_15940000
seq2: B6Ng01-041G05.g_71_1044

seq1  GAATTCACAGCCTGATCCCCTGCCAAAGCCATGGAAAAAGGAGAAACCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAGCCTGATCCCCTGCCAAAGCCATGGAAAAAGGAGAAACCCT  50

seq1  GAAGCTCTGTACACTGGTCAGCCAGTTTGAGAGTCCTGTCAAGACAAGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCTCTGTACACTGGTCAGCCAGTTTGAGAGTCCTGTCAAGACAAGGT  100

seq1  TAATGATATCCTTGCCAATGGTGTAGTTGCCAGGGGCACAGTTATAGGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGATATCCTTGCCAATGGTGTAGTTGCCAGGGGCACAGTTATAGGCA  150

seq1  GCATCTTCCTTGCCTGTGATGAGCTGAGCTGCTCAGGGTAGAAAAGCTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTTCCTTGCCTGTGATGAGCTGAGCTGCTCAGGGTAGAAAAGCTGG  200

seq1  CAGTAGGTACCAGTGCGCAATTCATCAATAGCTATGCATTCCAGGTCTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAGGTACCAGTGCGCAATTCATCAATAGCTATGCATTCCAGGTCTAC  250

seq1  GATCACTGCCCAGGGCACATGCTTGCTAGTGCCTGTCTCACTGAAGGAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCACTGCCCAGGGCACATGCTTGCTAGTGCCTGTCTCACTGAAGGAGA  300

seq1  TCCTCAAAGAGTCATCTCTTCCCCAATGATCATGTCACTTGGCATGTGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCAAAGAGTCATCTCTTCCCCAATGATCATGTCACTTGGCATGTGGC  350

seq1  CATCAGGTTAGATGCCATTTTCCTAGCAGTAGAGCTGCCAGTAGGCATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGGTTAGATGCCATTTTCCTAGCAGTAGAGCTGCCAGTAGGCATTT  400

seq1  CCCATCTGGACATCAGCCTGGCCAACATTTATGGAGATGCACTCACACAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATCTGGACATCAGCCTGGCCAACATTTATGGAGATGCACTCACACAT  450

seq1  GGATGCTACTTGAGGCTGCTGAATGAATGGGGGAAGACAAGGAAGCAGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGCTACTTGAGGCTGCTGAATGAATGGGGGAAGACAAGGAAGCAGTA  500

seq1  CTTCTTATAGCTTGACTCTTAAAAGGTCTCTAATGATACATTTAACTATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTATAGCTTGACTCTTAAAAGGTCTCTAATGATACATTTAACTATA  550

seq1  ATAATGTAGCAAACACGGTTTCTTCTCTCCCAACACTAAACTGTAGCAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGTAGCAAACACGGTTTCTTCTCTCCCAACACTAAACTGTAGCAAA  600

seq1  CACTTTTCACTCCCTCCCCTAAATTTCTCTGCACAGAGAT-AAGAGGATG  649
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CACTTTTCACTCCCTCCCCTAAATTTCTCTGCACAGAGATAAAGAGGATG  650

seq1  GATGGTATTTACCACATAGCCTCAGAGTAAGAATTCCAAGCTCTCCCCTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGTATTTACCACATAGCCTCAGAGTAAGAATTCCAAGCTCTCCCCTT  700

seq1  ACCGCTCAACAGTA-CCCCAAAGGTGTCAGGAGACTTTCAGAGGGTTATT  748
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  ACCGCTCAACAGTACCCCCAAAGGTGTCAGGAGACTTTCAGAGGGTTATT  750

seq1  TTCTAAAAGAAATGTAGCTCCCCAAGAGGCTTCAAATTTTCACTCCAGCC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAAAGAAATGTAGCTCCCCAAGAGGCTTCAAATTTTCACTCCAGCC  800

seq1  TGCTTTTTACAATACTCAAAGTGGACGATGTGTACATACACAACAATCTG  848
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TGCTTTTTACAA-ACTCAAAGTGGACGATGTGTACATACACAACAATCTG  849

seq1  TCTAGAACATAGAAT-CCAGCAGTCTTTGGCATAAAACTTTTCTAGATCT  897
      ||||||||||| ||| |||||||||||||||||||||| |||||||||||
seq2  TCTAGAACATAAAATCCCAGCAGTCTTTGGCATAAAAC-TTTCTAGATCT  898

seq1  AGAATTTAAAGTCTCCTTACAAACTCAGGAGGTTGGGCAGACCTAGGTCG  947
       | || ||||||||||||   | ||| |||||||||||||||||||||| 
seq2  -GGATATAAAGTCTCCTT--CATCTC-GGAGGTTGGGCAGACCTAGGTCT  944

seq1  TTGCTATTACAGCAGGAGTCTGATTTCTCT  977
      ||||| ||   ||||||||| |||||||||
seq2  TTGCTTTTTACGCAGGAGTCAGATTTCTCT  974