BAC Information

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BAC

Clone NameB6Ng01-042F24
Chromosome4 (Build37)
Map Location 16,681,617 - 16,796,335
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC633695, Calb1, Decr1, Nbn, Osgin2, Ripk2, LOC667150, LOC383994
Downstream geneLOC100040154, LOC667212, LOC100040173, Mmp16
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-042F24.bB6Ng01-042F24.g
ACCDH868773DH868774
length9151,014
definitionDH868773|Mus musculus domesticus DNA, BAC clone: B6Ng01-042F24, 5' end.DH868774|Mus musculus domesticus DNA, BAC clone: B6Ng01-042F24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(16,681,617 - 16,682,537)(16,795,306 - 16,796,335)
sequence
gaattctactatttttcctacctagtactgcatactagtaattctaagta
aagaatccaattaaaagttatcacctgtgacttaggtttaactatggggg
aaatgtctggtgcagatacacatcctgtgtattggtataatcacttaatt
tctttgaggtttgttttcctatgatatttagaatgtattcttcatctgcc
tatgtcaggacttgtgttttaccacctactgtccacctgaagccacataa
acatgtaaatgtgtgtgagactgtgtatatgtatgcaagtatttctcatt
tgataggtaactaatttctcaataatagcttgaacaaattaaagtatata
attatttatatataatcaaaagtctgtattaattaattagtatacataat
caatggtggggattatttatttatttatttattttaaaattaacagtagt
tcagctgtaaatgagcactaagtatacagaatttgggcgtaaatatacat
tctcacctatgtctcagggaaaacaacaaaagtgacgttaaacccataaa
acagagctggtaagcctctcagcctatagaaagctttaatgactcactaa
gactatacagggttatttggaccaaaatcattattcaataaatttcatgc
ttctgtgtttcatgaattattgaatgaaaacttgattccagcattattgt
gtactgagcttttggttttagggtgtaatagttgtgtgggtgataatatt
tgtttgttcgttttattcatccattcaacaattatttattgataatctag
ctagtacttgtacttctctagacatttgggcaaattagcaaatgaatttc
gtttctacgatcaaaaaataacacaatgtagtgttcactagatccattag
tacaatggtaggtgt
gaattcttatctgatattgtgctactggaaagttcaaaactactatggca
atatttcaaataaagagaatattcaaagctatacaatttgataaggtagt
gtgaaaatgaagctagaattgagaagtaaggaatgaaatatgaatgatta
aagtactgagaagagagtatgagaatcagaaaagacagaccaagtggtat
atttgggaaaaaataaggtgaatttgaagaaattaggccaaaacatacca
aaagataaaagtaataactatgttaagaaacaaaagaatagactcaaaaa
tagtaaaacagcatgttttctctgataaatgatgctaatggaacttagat
ttaaaattattcacgtaaaattattcaagatagaaaaatgagtttaagtc
aaaccctgaaaggttcatattcagagaataagagagccatgataaataaa
ataaatatattgtaggctggaagaaatatcaagattctaaaagccgagac
aaaaggaaataatgagaagaaaatggttaattgagtcaaatattgataga
tggagaatagctgtcaaataaacccatgggcttaattgaaaaatgatcaa
tgaccctaaaataaaagttttcatagtgtccggggcaagacatcagagga
tgagctgagggagaaaatgaaatgactgaggacatacagtgactacagtc
actccttcaagaaggtttatttgtagagataagaaatttgaggaaaaagt
ggatattaaatcagggttttgtatatcacctagtccatatataaccaaga
agtcatttccaatttatactggcttgaaaagaaaagagcaattttctcca
gtaaaatgacactggtgtaggatccatgtataggacaggtttcatgatca
gtgttatatccaatacacaatatagtgaatgagttatatatgactcctct
gtatgtaaagaacgaagtgaagtgtacattaaggtgtgggagatctgaag
gactgagagaggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_16681617_16682537
seq2: B6Ng01-042F24.b_40_954

seq1  GAATTCTACTATTTTTCCTACCTAGTACTGCATACTAGTAATTCTAAGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACTATTTTTCCTACCTAGTACTGCATACTAGTAATTCTAAGTA  50

seq1  AAGAATCCAATTAAAAGTTATCACCTGTGACTTAGGTTTAACTATGGGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATCCAATTAAAAGTTATCACCTGTGACTTAGGTTTAACTATGGGGG  100

seq1  AAATGTCTGGTGCAGATACACATCCTGTGTATTGGTATAATCACTTAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTCTGGTGCAGATACACATCCTGTGTATTGGTATAATCACTTAATT  150

seq1  TCTTTGAGGTTTGTTTTCCTATGATATTTAGAATGTATTCTTCATCTGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGAGGTTTGTTTTCCTATGATATTTAGAATGTATTCTTCATCTGCC  200

seq1  TATGTCAGGACTTGTGTTTTACCACCTACTGTCCACCTGAAGCCACATAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCAGGACTTGTGTTTTACCACCTACTGTCCACCTGAAGCCACATAA  250

seq1  ACATGTAAATGTGTGTGAGACTGTGTATATGTATGCAAGTATTTCTCATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTAAATGTGTGTGAGACTGTGTATATGTATGCAAGTATTTCTCATT  300

seq1  TGATAGGTAACTAATTTCTCAATAATAGCTTGAACAAATTAAAGTATATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAGGTAACTAATTTCTCAATAATAGCTTGAACAAATTAAAGTATATA  350

seq1  ATTATTTATATATAATCAAAAGTCTGTATTAATTAATTAGTATACATAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTATATATAATCAAAAGTCTGTATTAATTAATTAGTATACATAAT  400

seq1  CAATGGTGGGGATTATTTATTTATTTATTTATTTTAAAATTAACAGTAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGTGGGGATTATTTATTTATTTATTTATTTTAAAATTAACAGTAGT  450

seq1  TCAGCTGTAAATGAGCACTAAGTATACAGAATTTGGGCGTAAATATACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTGTAAATGAGCACTAAGTATACAGAATTTGGGCGTAAATATACAT  500

seq1  TCTCACCTATGTCTCAGGGAAAACAACAAAAGTGACGTTAAACCCATAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACCTATGTCTCAGGGAAAACAACAAAAGTGACGTTAAACCCATAAA  550

seq1  ACAGAGCTGGTAAGCCTCTCAGCCTATAGAAAGCTTTAATGACTCACTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGCTGGTAAGCCTCTCAGCCTATAGAAAGCTTTAATGACTCACTAA  600

seq1  GACTATACAGGGTTATTTGGACCAAAATCATTATTCAATAAATTTCATGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTATACAGGGTTATTTGGACCAAAATCATTATTCAATAAATTTCATGC  650

seq1  TTCTGTGTTTCATGAATTATTGAATGAAAACTTGATTCCAGCATTATTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTGTTTCATGAATTATTGAATGAAAACTTGATTCCAGCATTATTGT  700

seq1  GTACTGAGCTTTTGGTTTTAGGGTGTAATAGTTGTGTGGGTGATAATATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTGAGCTTTTGGTTTTAGGGTGTAATAGTTGTGTGGGTGATAATATT  750

seq1  TGTTTGTTTGTTTTATTCATCCATTCAACAATTATTTATTGATAACCTAG  800
      |||||||| |||||||||||||||||||||||||||||||||||| ||||
seq2  TGTTTGTTCGTTTTATTCATCCATTCAACAATTATTTATTGATAATCTAG  800

seq1  CAAGCACTTGTACTTCTCTAGACATTTGGGGCAAATTAGCAAAGTGAATT  850
      | || |||||||||||||||||||||| ||||||||||||||| ||||||
seq2  CTAGTACTTGTACTTCTCTAGACATTT-GGGCAAATTAGCAAA-TGAATT  848

seq1  TTGTTTCTTACGATTCAAAAAATAACCACAATGGAGTGTTCACTAGATCC  900
      | ||||| ||||| ||||||||||| ||||||| ||||||||||||||||
seq2  TCGTTTC-TACGA-TCAAAAAATAA-CACAATGTAGTGTTCACTAGATCC  895

seq1  ATTATTACAAATGGTATGTGT  921
      |||| ||| ||||||| ||||
seq2  ATTAGTAC-AATGGTAGGTGT  915

seq1: chr4_16795306_16796335
seq2: B6Ng01-042F24.g_64_1077 (reverse)

seq1  TTCCTCTCCTCCAAGTCCTTCCAGATTCTCCCCAACACCTTAATGTACCA  50
      ||||||| |||  ||||||| |||| ||||||  ||||||||||||||  
seq2  TTCCTCT-CTC--AGTCCTT-CAGA-TCTCCC--ACACCTTAATGTAC--  41

seq1  ACTTCACCTTCGTTCTTTACATTACAGAGGAAGTCATATATAACTCATTC  100
      |||||| |||||||||||||| |||||||| |||||||||||||||||||
seq2  ACTTCA-CTTCGTTCTTTACA-TACAGAGG-AGTCATATATAACTCATTC  88

seq1  ACTATATTGTGTATTGGATAATAACACTTGATCATGAAACCTGTCCTAAT  150
      ||||||||||||||||||| ||||||| ||||||||||||||||||| ||
seq2  ACTATATTGTGTATTGGAT-ATAACAC-TGATCATGAAACCTGTCCT-AT  135

seq1  ACATGGATCCTACACCCAGTGTCATTTTACTGGAGAAAATTGCTCTTTTC  200
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  ACATGGATCCTACA-CCAGTGTCATTTTACTGGAGAAAATTGCTCTTTTC  184

seq1  TTTTCAAGCCAGTATAAATTGGAAATGACTTCTTGGTTATATATGGACTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAAGCCAGTATAAATTGGAAATGACTTCTTGGTTATATATGGACTA  234

seq1  GGTGATATACAAAACCCTGATTTAATATCCACTTTTTCCTCAAATTTCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGATATACAAAACCCTGATTTAATATCCACTTTTTCCTCAAATTTCTT  284

seq1  ATCTCTACAAATAAACCTTCTTGAAGGAGTGACTGTAGTCACTGTATGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTACAAATAAACCTTCTTGAAGGAGTGACTGTAGTCACTGTATGTC  334

seq1  CTCAGTCATTTCATTTTCTCCCTCAGCTCATCCTCTGATGTCTTGCCCCG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTCATTTCATTTTCTCCCTCAGCTCATCCTCTGATGTCTTGCCCCG  384

seq1  GACACTATGAAAACTTTTATTTTAGGGTCATTGATCATTTTTCAATTAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTATGAAAACTTTTATTTTAGGGTCATTGATCATTTTTCAATTAAG  434

seq1  CCCATGGGTTTATTTGACAGCTATTCTCCATCTATCAATATTTGACTCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATGGGTTTATTTGACAGCTATTCTCCATCTATCAATATTTGACTCAA  484

seq1  TTAACCATTTTCTTCTCATTATTTCCTTTTGTCTCGGCTTTTAGAATCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACCATTTTCTTCTCATTATTTCCTTTTGTCTCGGCTTTTAGAATCTT  534

seq1  GATATTTCTTCCAGCCTACAATATATTTATTTTATTTATCATGGCTCTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTTCTTCCAGCCTACAATATATTTATTTTATTTATCATGGCTCTCT  584

seq1  TATTCTCTGAATATGAACCTTTCAGGGTTTGACTTAAACTCATTTTTCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTCTGAATATGAACCTTTCAGGGTTTGACTTAAACTCATTTTTCTA  634

seq1  TCTTGAATAATTTTACGTGAATAATTTTAAATCTAAGTTCCATTAGCATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGAATAATTTTACGTGAATAATTTTAAATCTAAGTTCCATTAGCATC  684

seq1  ATTTATCAGAGAAAACATGCTGTTTTACTATTTTTGAGTCTATTCTTTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATCAGAGAAAACATGCTGTTTTACTATTTTTGAGTCTATTCTTTTG  734

seq1  TTTCTTAACATAGTTATTACTTTTATCTTTTGGTATGTTTTGGCCTAATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTAACATAGTTATTACTTTTATCTTTTGGTATGTTTTGGCCTAATT  784

seq1  TCTTCAAATTCACCTTATTTTTTCCCAAATATACCACTTGGTCTGTCTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAAATTCACCTTATTTTTTCCCAAATATACCACTTGGTCTGTCTTT  834

seq1  TCTGATTCTCATACTCTCTTCTCAGTACTTTAATCATTCATATTTCATTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATTCTCATACTCTCTTCTCAGTACTTTAATCATTCATATTTCATTC  884

seq1  CTTACTTCTCAATTCTAGCTTCATTTTCACACTACCTTATCAAATTGTAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACTTCTCAATTCTAGCTTCATTTTCACACTACCTTATCAAATTGTAT  934

seq1  AGCTTTGAATATTCTCTTTATTTGAAATATTGCCATAGTAGTTTTGAACT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTGAATATTCTCTTTATTTGAAATATTGCCATAGTAGTTTTGAACT  984

seq1  TTCCAGTAGCACAATATCAGATAAGAATTC  1030
      ||||||||||||||||||||||||||||||
seq2  TTCCAGTAGCACAATATCAGATAAGAATTC  1014