BAC Information

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BAC

Clone NameB6Ng01-042I16
Chromosome4 (Build37)
Map Location 98,236,126 - 98,300,955
singlet/doubletdoublet
Overlap geneInadl
Upstream geneNfia, LOC100039459, LOC669426, LOC384106, 0610025J13Rik, Tm2d1
Downstream geneL1td1, Ankrd38, LOC100039541, Usp1, Dock7, Angptl3, LOC665193, Atg4c, LOC665212, LOC638890
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-042I16.bB6Ng01-042I16.g
ACCDH868890DH868891
length483262
definitionDH868890|Mus musculus domesticus DNA, BAC clone: B6Ng01-042I16, 5' end.DH868891|Mus musculus domesticus DNA, BAC clone: B6Ng01-042I16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(98,300,467 - 98,300,955)(98,236,126 - 98,236,387)
sequence
tttacattgcaaaattagtttggatcggctttcaccattgcttcagagtc
tttcatggagtcataattcctgtagaaacctatattctcctctctgggtt
cagctgaacttgagagaagtgaccactcccagggtgacaataatggacac
cacaacataagaccacaagatgttcagccagaagtctgcccctgaggtgt
caccaaaggactggaggccatggaagtaaatgtgtgccacacactgcaac
tgtccttttaatatttataatgccaattatcttgggatgtggagtctgga
tgttgtaaaggtcaaactctcagtcccctaagtagctgggaggactggca
cacgaggatccttccctcctcctgtctctttgagtctgtatgtgggtatg
tgagatgtgtgtgtgtgagtgtgataatgcgtgttcatgaatgtgagtgt
gataatgcgagttcatgaatgtgagtttggtgt
ttattgaaaacagctaatgtctgttccattggtaacttgttagggtcaca
tagcctctttagtttagaaagcagggaatagactggtcctcaggtactca
ctctccagatgacctcttcagtactctggcaaggttgttctattttccta
agcttaaattcagggcattgctttgagtttactgaagtttaatattcatt
ttcctcattcattcagcttggttttttgtttgtttggttggttggtgttt
tttgttttttgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_98300467_98300955
seq2: B6Ng01-042I16.b_48_536 (reverse)

seq1  ACACCATACTCACATTCATGAACACGCATTATCACACTCACATTCATGAA  50
      |||||| |||||||||||||||| ||||||||||||||||||||||||||
seq2  ACACCAAACTCACATTCATGAACTCGCATTATCACACTCACATTCATGAA  50

seq1  CACGCATTATCACACTCACACACACACATCTCACATACCCACATACAGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGCATTATCACACTCACACACACACATCTCACATACCCACATACAGAC  100

seq1  TCAAAGAGACAGGAGGAGGGAAGGATCCTCGTGTGCCAGTCCTCCCAGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGAGACAGGAGGAGGGAAGGATCCTCGTGTGCCAGTCCTCCCAGCT  150

seq1  ACTTAGGGGACTGAGAGTTTGACCTTTACAACATCCAGACTCCACATCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAGGGGACTGAGAGTTTGACCTTTACAACATCCAGACTCCACATCCC  200

seq1  AAGATAATTGGCATTATAAATATTAAAAGGACAGTTGCAGTGTGTGGCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATAATTGGCATTATAAATATTAAAAGGACAGTTGCAGTGTGTGGCAC  250

seq1  ACATTTACTTCCATGGCCTCCAGTCCTTTGGTGACACCTCAGGGGCAGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTACTTCCATGGCCTCCAGTCCTTTGGTGACACCTCAGGGGCAGAC  300

seq1  TTCTGGCTGAACATCTTGTGGTCTTATGTTGTGGTGTCCATTATTGTCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGCTGAACATCTTGTGGTCTTATGTTGTGGTGTCCATTATTGTCAC  350

seq1  CCTGGGAGTGGTCACTTCTCTCAAGTTCAGCTGAACCCAGAGAGGAGAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGAGTGGTCACTTCTCTCAAGTTCAGCTGAACCCAGAGAGGAGAAT  400

seq1  ATAGGTTTCTACAGGAATTATGACTCCATGAAAGACTCTGAAGCAATGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGTTTCTACAGGAATTATGACTCCATGAAAGACTCTGAAGCAATGGT  450

seq1  GAAAGCCGATCCAAACTAATTTTGCAATGTAAAGAATTC  489
      |||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCCGATCCAAACTAATTTTGCAATGTAAAGAATTC  489

seq1: chr4_98236126_98236387
seq2: B6Ng01-042I16.g_74_335

seq1  TTATTGAAAACAGCTAATGTCTGTTCCATTGGTAACTTGTTAGGGTCACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGAAAACAGCTAATGTCTGTTCCATTGGTAACTTGTTAGGGTCACA  50

seq1  TAGCCTCTTTAGTTTAGAAAGCAGGGAATAGACTGGTCCTCAGGTACTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCTCTTTAGTTTAGAAAGCAGGGAATAGACTGGTCCTCAGGTACTCA  100

seq1  CTCTCCAGATGACCTCTTCAGTACTCTGGCAAGGTTGTTCTATTTTCCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCAGATGACCTCTTCAGTACTCTGGCAAGGTTGTTCTATTTTCCTA  150

seq1  AGCTTAAATTCAGGGCATTGCTTTGAGTTTACTGAAGTTTAATATTCATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTAAATTCAGGGCATTGCTTTGAGTTTACTGAAGTTTAATATTCATT  200

seq1  TTCCTCATTCATTCAGCTTGGTTTTTTGTTTGTTTGGTTGGTTGGTGTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCATTCATTCAGCTTGGTTTTTTGTTTGTTTGGTTGGTTGGTGTTT  250

seq1  TTTGTTTTTTGT  262
      ||||||||||||
seq2  TTTGTTTTTTGT  262