BAC Information

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BAC

Clone NameB6Ng01-043A05
Chromosome4 (Build37)
Map Location 149,718,214 - 149,866,566
singlet/doubletdoublet
Overlap geneRere
Upstream geneUbe4b, Rbp7, LOC627985, Nmnat1, Lzic, Ctnnbip1, Clstn1, Pik3cd, D4Ertd429e, Slc25a33, Spsb1, H6pd, Gpr157, Slc2a5, LOC435818, Car6, LOC100041882, Eno1, LOC666880, LOC384091
Downstream geneSlc45a1, LOC677027, Errfi1, Park7, Tnfrsf9, Uts2, Per3, Vamp3, Camta1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-043A05.bB6Ng01-043A05.g
ACCDH869206DH869207
length1,0761,099
definitionDH869206|Mus musculus domesticus DNA, BAC clone: B6Ng01-043A05, 5' end.DH869207|Mus musculus domesticus DNA, BAC clone: B6Ng01-043A05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(149,865,479 - 149,866,566)(149,718,214 - 149,719,331)
sequence
gaattccagttccggggatcaaatgccctcttctggtgaattcaggcacc
aggcaagctagtggtacacagacacacacatgggcaaatcactaataaac
ataaagtaaaagaagaaaaaaagtaaaaaaaaaaaaaaaaaaaaaaaaat
ttcaggacctagaaaggtagtatatgattgcaatcccagctacgaaggag
gtgaaacagtaggattgccaagtttaaggccagtctaggcaacttagtga
gatcctatctcaaaatacaatgaagacagagtatacaacttaatggttga
gcatttagctaccaacaagtagagggaaaaaaagttttattcaagaggac
caaagataagcatttaaaaagagcaaggaggaggtagactggtcaggtgt
ggacagctggttacaaacagccaagacaattcctaatgctgttctgcttc
tgaacacatcgtcaagaaactggagatgaggacttggagtcatgacagca
cacaagcactctgcattgttctcatcatctttacagagatcaggcccatt
ggaagccgagctcagagcacacgagcagctggtccagtccactgagtatg
tgggatatcaacaccatctggcttcagatctagtcacttctcttactccc
gacatcaatcatttactgaacacattttggtttgtgattgcaggtttttt
tttgtttttgtttttgtttttgttttttttttggaaatagggcctaacta
tgtattgctgactggcttggaattcactttgtagaccagaattgctgcaa
actcacagaaatcctcattccttgcctctggatgctaagattaaaggtct
gtgcctctacacccatttaaacatattatgtcaaagattcgtttgtgtca
agcatggtggcacttgtgtggcaaaggtagtaggtctttgaattctagtc
aaccggtactgcataatgaaaccctatctcagtccctcttatcccacagg
tgatccatttgtcaagtcttaactaggatgagttatagactaatggctgg
gtagggtgggtgcatgttttcatccc
gaattccaagtcagctggactacatacacagtgcgggaacaggttgatgg
ctagatgtgtatggagtgtggcttgtgagctctagtgtgctgttggctaa
gtgctttgagcataggaagagtcctgcattagagaaggtgatgatttagt
cagtcgtgttccctctcattttaatgacttaatggcacagccgaggctag
atagtgagactcttgtttaaaaagaaggagaaaaggctgaaaaagcaagc
tgtaaaacttaccgactgtctgagtcagggtttctattcctgcacaaaca
tcttgaccaagaagcatgctttattgcgtgtatgctgatgagcagtttga
atgaaatgtccacgccaaagtctgtcctttcgtagctcatttcgtgcact
tggtgaaagtcactctgttctcttcccacgtaggactgacttgatagcta
atagccagtgtctgctttgttccagaaatcttgctaattctttgggattt
actgtggtgaagagactttgcttgtctgaagcatatgaagtgatacagtt
ttggtagcgtgtggtgttctgaggttgttaggtgactcacagcaagagag
aactaacttgagacccaaaggatggtggctaatctttgttgtcaagttgt
ggaatcaactgggcttaactgtgagggatttccttaattggatcatttga
ggtaagaaaactcaccctaacgcttgaccatgccttctggctgctgccca
atgccacagaaagaagatgggagaaggaagctttgcttttcctgtgcttg
ccttcactctcagtggcactgtctgtcctgttactggtctgtcctgccgt
cccttctctgtcccctcccctgctagaacctacttttaggattctagcat
gcagtgaagaccagcagttctttaggaaaccctctgtaactctagcatca
gacactgagatgtgaggcatccagtcctatggagtgaacagttactggat
tctgtctttgcttcaggagatagcattgttgtacatctagacaagcgtta
tgtaaaatatatttcctctgtcttgaaaccctgactgaaaatgggtgtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_149865479_149866566
seq2: B6Ng01-043A05.b_47_1122 (reverse)

seq1  GGGATTGAAGACATGCACCACCACTACCCAGCCATTTAGTCTTATAACCT  50
      |||| |||| |||||||||  | ||||||||||| |||||| ||||| ||
seq2  GGGA-TGAAAACATGCACCCACCCTACCCAGCCA-TTAGTC-TATAA-CT  46

seq1  CCATTCCTAGTTTAGGACTTGGCAAATGGATCACCTTGTGGGGATAAGAG  100
      |   |||||| ||| |||||| ||||||||||||| ||| ||||||||||
seq2  C--ATCCTAG-TTAAGACTTGACAAATGGATCACC-TGT-GGGATAAGAG  91

seq1  GGACTGAGATAGGGTTTCATTATGCAGTACCGGTTGACCTAGAATTCAAA  150
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GGACTGAGATAGGGTTTCATTATGCAGTACCGGTTGA-CTAGAATTCAAA  140

seq1  GACCTACTTACCTTTGCCACACAAGTGCCACCATGCTTGACACAAACGAA  200
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTAC-TACCTTTGCCACACAAGTGCCACCATGCTTGACACAAACGAA  189

seq1  TCTTTGACATAAATATGTTTAAATGGGTGTAGAGGCACAGACCTTTAATC  250
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGACAT-AATATGTTTAAATGGGTGTAGAGGCACAGACCTTTAATC  238

seq1  TTAGCATCCAGAGGCAAGGAATGAGGATTTCTGTGAGTTTGCAGCAATTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCATCCAGAGGCAAGGAATGAGGATTTCTGTGAGTTTGCAGCAATTC  288

seq1  TGGTCTACAAAGTGAATTCCAAGCCAGTCAGCAATACATAGTTAGGCCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTACAAAGTGAATTCCAAGCCAGTCAGCAATACATAGTTAGGCCCT  338

seq1  ATTTCCAAAAAAAAAACAAAAACAAAAACAAAAACAAAAAAAAACCTGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCAAAAAAAAAACAAAAACAAAAACAAAAACAAAAAAAAACCTGCA  388

seq1  ATCACAAACCAAAATGTGTTCAGTAAATGATTGATGTCGGGAGTAAGAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACAAACCAAAATGTGTTCAGTAAATGATTGATGTCGGGAGTAAGAGA  438

seq1  AGTGACTAGATCTGAAGCCAGATGGTGTTGATATCCCACATACTCAGTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGACTAGATCTGAAGCCAGATGGTGTTGATATCCCACATACTCAGTGG  488

seq1  ACTGGACCAGCTGCTCGTGTGCTCTGAGCTCGGCTTCCAATGGGCCTGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGACCAGCTGCTCGTGTGCTCTGAGCTCGGCTTCCAATGGGCCTGAT  538

seq1  CTCTGTAAAGATGATGAGAACAATGCAGAGTGCTTGTGTGCTGTCATGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTAAAGATGATGAGAACAATGCAGAGTGCTTGTGTGCTGTCATGAC  588

seq1  TCCAAGTCCTCATCTCCAGTTTCTTGACGATGTGTTCAGAAGCAGAACAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGTCCTCATCTCCAGTTTCTTGACGATGTGTTCAGAAGCAGAACAG  638

seq1  CATTAGGAATTGTCTTGGCTGTTTGTAACCAGCTGTCCACACCTGACCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAGGAATTGTCTTGGCTGTTTGTAACCAGCTGTCCACACCTGACCAG  688

seq1  TCTACCTCCTCCTTGCTCTTTTTAAATGCTTATCTTTGGTCCTCTTGAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACCTCCTCCTTGCTCTTTTTAAATGCTTATCTTTGGTCCTCTTGAAT  738

seq1  AAAACTTTTTTTCCCTCTACTTGTTGGTAGCTAAATGCTCAACCATTAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTTTTTTTCCCTCTACTTGTTGGTAGCTAAATGCTCAACCATTAAG  788

seq1  TTGTATACTCTGTCTTCATTGTATTTTGAGATAGGATCTCACTAAGTTGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATACTCTGTCTTCATTGTATTTTGAGATAGGATCTCACTAAGTTGC  838

seq1  CTAGACTGGCCTTAAACTTGGCAATCCTACTGTTTCACCTCCTTCGTAGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGACTGGCCTTAAACTTGGCAATCCTACTGTTTCACCTCCTTCGTAGC  888

seq1  TGGGATTGCAATCATATACTACCTTTCTAGGTCCTGAAATTTTTTTTTTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGATTGCAATCATATACTACCTTTCTAGGTCCTGAAATTTTTTTTTTT  938

seq1  TTTTTTTTTTTTTTACTTTTTTTCTTCTTTTACTTTATGTTTATTAGTGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTTACTTTTTTTCTTCTTTTACTTTATGTTTATTAGTGA  988

seq1  TTTGCCCATGTGTGTGTCTGTGTACCACTAGCTTGCCTGGTGCCTGAATT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCCATGTGTGTGTCTGTGTACCACTAGCTTGCCTGGTGCCTGAATT  1038

seq1  CACCAGAAGAGGGCATTTGATCCCCGGAACTGGAATTC  1088
      ||||||||||||||||||||||||||||||||||||||
seq2  CACCAGAAGAGGGCATTTGATCCCCGGAACTGGAATTC  1076

seq1: chr4_149718214_149719331
seq2: B6Ng01-043A05.g_68_1166

seq1  GAATTCCAAGTCAGCTGGACTACATACACAGTGCGGGAACAGGTTGATGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGTCAGCTGGACTACATACACAGTGCGGGAACAGGTTGATGG  50

seq1  CTAGATGTGTATGGAGTGTGGCTTGTGAGCTCTAGTGTGCTGTTGGCTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGATGTGTATGGAGTGTGGCTTGTGAGCTCTAGTGTGCTGTTGGCTAA  100

seq1  GTGCTTTGAGCATAGGAAGAGTCCTGCATTAGAGAAGGTGATGATTTAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTTTGAGCATAGGAAGAGTCCTGCATTAGAGAAGGTGATGATTTAGT  150

seq1  CAGTCGTGTTCCCTCTCATTTTAATGACTTAATGGCACAGCCGAGGCTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCGTGTTCCCTCTCATTTTAATGACTTAATGGCACAGCCGAGGCTAG  200

seq1  ATAGTGAGACTCTTGTTTAAAAAGAAGGAGAAAAGGCTGAAAAAGCAAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGAGACTCTTGTTTAAAAAGAAGGAGAAAAGGCTGAAAAAGCAAGC  250

seq1  TGTAAAACTTACCGACTGTCTGAGTCAGGGTTTCTATTCCTGCACAAACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAAACTTACCGACTGTCTGAGTCAGGGTTTCTATTCCTGCACAAACA  300

seq1  TCTTGACCAAGAAGCATGCTTTATTGCGTGTATGCTGATGAGCAGTTTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGACCAAGAAGCATGCTTTATTGCGTGTATGCTGATGAGCAGTTTGA  350

seq1  ATGAAATGTCCACGCCAAAGTCTGTCCTTTCGTAGCTCATTTCGTGCACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAATGTCCACGCCAAAGTCTGTCCTTTCGTAGCTCATTTCGTGCACT  400

seq1  TGGTGAAAGTCACTCTGTTCTCTTCCCACGTAGGACTGACTTGATAGCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGAAAGTCACTCTGTTCTCTTCCCACGTAGGACTGACTTGATAGCTA  450

seq1  ATAGCCAGTGTCTGCTTTGTTCCAGAAATCTTGCTAATTCTTTGGGATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCCAGTGTCTGCTTTGTTCCAGAAATCTTGCTAATTCTTTGGGATTT  500

seq1  ACTGTGGTGAAGAGACTTTGCTTGTCTGAAGCATATGAAGTGATACAGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGGTGAAGAGACTTTGCTTGTCTGAAGCATATGAAGTGATACAGTT  550

seq1  TTGGTAGCGTGTGGTGTTCTGAGGTTGTTAGGTGACTCACAGCAAGAGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTAGCGTGTGGTGTTCTGAGGTTGTTAGGTGACTCACAGCAAGAGAG  600

seq1  AACTAACTTGAGACCCAAAGGATGGTGGCTAATCTTTGTTGTCAAGTTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAACTTGAGACCCAAAGGATGGTGGCTAATCTTTGTTGTCAAGTTGT  650

seq1  GGAATCAACTGGGCTTAACTGTGAGGGATTTCCTTAATTGGATCATTTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATCAACTGGGCTTAACTGTGAGGGATTTCCTTAATTGGATCATTTGA  700

seq1  GGTAAGAAAACTCACCCTAACGCTTGACCATGCCTTCTGGCTGCTGCCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAGAAAACTCACCCTAACGCTTGACCATGCCTTCTGGCTGCTGCCCA  750

seq1  ATGCCACAGAAAGAAGATGGGAGAAGGAAGCTTTGCTTTTCCTGTGCTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCACAGAAAGAAGATGGGAGAAGGAAGCTTTGCTTTTCCTGTGCTTG  800

seq1  CCTTCACTCTCAGTGGCACTGTCTGTCCTGTTACTGGTCTGTCCTGCCGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCACTCTCAGTGGCACTGTCTGTCCTGTTACTGGTCTGTCCTGCCGT  850

seq1  CCCTTCTCTGTCCCCTCCCCTGCTAGAACCTACTTTTAGGAATTCTAGCA  900
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CCCTTCTCTGTCCCCTCCCCTGCTAGAACCTACTTTTAGG-ATTCTAGCA  899

seq1  TGCAGTGAAGACCAGCAGTTCTTTAGGAAACCCTCTGTAACTCTAGCATC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGTGAAGACCAGCAGTTCTTTAGGAAACCCTCTGTAACTCTAGCATC  949

seq1  AGACACTGAGAATGTTGAGGCATCCAGTCCTATGGAGTGAACAGTTACTG  1000
      |||||||||| ||| |||||||||||||||||||||||||||||||||||
seq2  AGACACTGAG-ATG-TGAGGCATCCAGTCCTATGGAGTGAACAGTTACTG  997

seq1  GATTCTTGTCCTTTGCTTCAGGAGATAGCATTGTTGTACCATCTAGACCA  1050
      ||||| ||| |||||||||||||||||||||||||||| |||||||||  
seq2  GATTC-TGT-CTTTGCTTCAGGAGATAGCATTGTTGTA-CATCTAGAC--  1042

seq1  CAGCCTTTTAATGTAAAAATTATATTCCTTCTGTTCCTTTTGAGAACCCT  1100
       ||| ||   ||||||||  |||||| | ||||    | |||| ||||||
seq2  AAGCGTT---ATGTAAAA--TATATTTCCTCTG----TCTTGA-AACCCT  1082

seq1  GACTGAAAAGTGGGTGTC  1118
      ||||||||| ||||||||
seq2  GACTGAAAA-TGGGTGTC  1099