BAC Information

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BAC

Clone NameB6Ng01-043L23
Chromosome4 (Build37)
Map Location 84,104,923 - 84,220,957
singlet/doubletdoublet
Overlap geneBnc2
Upstream geneSnapc3, Psip1, LOC100040611, 4930473A06Rik, LOC668010
Downstream geneLOC100040660, LOC624465, LOC100040284, D530005L17Rik, LOC622811, LOC100040303, Sh3gl2, A930009N24
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-043L23.bB6Ng01-043L23.g
ACCDH869715DH869716
length995252
definitionDH869715|Mus musculus domesticus DNA, BAC clone: B6Ng01-043L23, 5' end.DH869716|Mus musculus domesticus DNA, BAC clone: B6Ng01-043L23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(84,219,962 - 84,220,957)(84,104,923 - 84,105,174)
sequence
gaattccaaggaataaaatgtaatcggctagggttgagctttgaaggacc
ataaactgatattttgaagatttgtgttttagccccagcatgtggacgga
gatcatcttaaacaccttagttacttatactccccctaatactgagtatg
tgtcctaagagccatcaaacagagatggcatttggataattactaattgc
cctgaggagattatactgaatttatgtatttttcctttggtcttaaatgg
gagctgaacacttggtggcatactgagatgttgtttttggtaactttatg
gcatttcttctcccagtagaagcagtttattgtatttttctggttataaa
agttatacattcatattacaagttaaatttaaatatacctaactcatgag
tttctgattctaaaagttgagttatttcatatttatgcaacttctgttct
ttagtattattgtgggatgcctacacagatttaagatatacaaacaatag
gactggttgtaagtaaatagcctggtggagaatacatcttgaggatgtgt
gtttgacactatgtgtagtatgttttatcccctgtttctacggggattat
taacacccattcacactattcacactgatgctagtgaggaaacttacatt
ctaaccaaagggtaagaagtctgggtaaaacaaattggaaaaaaaaaatc
tacttagtggagcttttgtttgtttgtttggtagattggattttgtccaa
aaggtcttaataaaatacctttctattaaagtcctttcaaatgccattgg
catagtaagttcatgtccctgattaaacatgccttagtatgccctttaac
ttttctatgggggaaaatatttttataacaaagcaaaagtattaagtaca
tttggtacaacatctaattcaagtgcttaaaccacacttcataacgtcga
agtgtggagctatagcctattgttcgagtagtgacatgtaattgg
aggtgcacttggtgagggccaggtccaaagcaaccgttcatcaaatctat
cactagagctggctcgggccagaaagatggcaccacaccttcctcaatga
gacaaggcaaatgagggaaatccactcaggtttgaaagaccacagctacc
cataaataagaacagcacacagagccacagagaagccacagggagatatt
aagctttttgtttgtttgtttgtttgttttggttggttggttggttggtt
gg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_84219962_84220957
seq2: B6Ng01-043L23.b_44_1038 (reverse)

seq1  CCAATTACATGTCACTACTCCAACAATAGGCTATAGCTTCACACTTCAAC  50
      |||||||||||||||||||| ||||||||||||||||| |||||||| ||
seq2  CCAATTACATGTCACTACTCGAACAATAGGCTATAGCTCCACACTTCGAC  50

seq1  GTTATGAAGTGTGGTTTAAGCACTTGAATTAAGATGTTGTACCAATTGTA  100
      |||||||||||||||||||||||||||||| |||||||||||||| ||||
seq2  GTTATGAAGTGTGGTTTAAGCACTTGAATT-AGATGTTGTACCAAATGTA  99

seq1  CTTAATACTTTTGCTTTGTTATAAAAATATTTTCCCCCATAGAAAAGTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATACTTTTGCTTTGTTATAAAAATATTTTCCCCCATAGAAAAGTTA  149

seq1  AAGGGCATACCTAAGGCATGTTTAATCAGGGACATGAACTTACTATGCCA  200
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGCATA-CTAAGGCATGTTTAATCAGGGACATGAACTTACTATGCCA  198

seq1  ATGGCATTTGAAAGGACTTTAATAGAAAGGTATTTTATTAAGACCTTTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCATTTGAAAGGACTTTAATAGAAAGGTATTTTATTAAGACCTTTTG  248

seq1  GACAAAATCCAATCTACCAAACAAACAAACAAAAGCTCCACTAAGTAGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAAATCCAATCTACCAAACAAACAAACAAAAGCTCCACTAAGTAGAT  298

seq1  TTTTTTTTTCCAATTTGTTTTACCCAGACTTCTTACCCTTTGGTTAGAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTCCAATTTGTTTTACCCAGACTTCTTACCCTTTGGTTAGAAT  348

seq1  GTAAGTTTCCTCACTAGCATCAGTGTGAATAGTGTGAATGGGTGTTAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGTTTCCTCACTAGCATCAGTGTGAATAGTGTGAATGGGTGTTAATA  398

seq1  ATCCCCGTAGAAACAGGGGATAAAACATACTACACATAGTGTC-AACACA  449
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  ATCCCCGTAGAAACAGGGGATAAAACATACTACACATAGTGTCAAACACA  448

seq1  CATCCTCAAGATGTATTCTCCACCAGGCTATTTACTTACAACCAGTCCTA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTCAAGATGTATTCTCCACCAGGCTATTTACTTACAACCAGTCCTA  498

seq1  TTGTTTGTATATCTTAAATCTGTGTAGGCATCCCACAATAATACTAAAGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTGTATATCTTAAATCTGTGTAGGCATCCCACAATAATACTAAAGA  548

seq1  ACAGAAGTTGCATAAATATGAAATAACTCAACTTTTAGAATCAGAAACTC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAGTTGCATAAATATGAAATAACTCAACTTTTAGAATCAGAAACTC  598

seq1  ATGAGTTAGGTATATTTAAATTTAACTTGTAATATGAATGTATAACTTTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGTTAGGTATATTTAAATTTAACTTGTAATATGAATGTATAACTTTT  648

seq1  ATAACCAGAAAAATACAATAAACTGCTTCTACTGGGAGAAGAAATGCCAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACCAGAAAAATACAATAAACTGCTTCTACTGGGAGAAGAAATGCCAT  698

seq1  AAAGTTACCAAAAACAACATCTCAGTATGCCACCAAGTGTTCAGCTCCCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTACCAAAAACAACATCTCAGTATGCCACCAAGTGTTCAGCTCCCA  748

seq1  TTTAAGACCAAAGGAAAAATACATAAATTCAGTATAATCTCCTCAGGGCA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGACCAAAGGAAAAATACATAAATTCAGTATAATCTCCTCAGGGCA  798

seq1  ATTAGTAATTATCCAAATGCCATCTCTGTTTGATGGCTCTTAGGACACAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGTAATTATCCAAATGCCATCTCTGTTTGATGGCTCTTAGGACACAT  848

seq1  ACTCAGTATTAGGGGGAGTATAAGTAACTAAGGTGTTTAAGATGATCTCC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGTATTAGGGGGAGTATAAGTAACTAAGGTGTTTAAGATGATCTCC  898

seq1  GTCCACATGCTGGGGCTAAAACACAAATCTTCAAAATATCAGTTTATGGT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCACATGCTGGGGCTAAAACACAAATCTTCAAAATATCAGTTTATGGT  948

seq1  CCTTCAAAGCTCAACCCTAGCCGATTACATTTTATTCCTTGGAATTC  996
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCAAAGCTCAACCCTAGCCGATTACATTTTATTCCTTGGAATTC  995

seq1: chr4_84104923_84105174
seq2: B6Ng01-043L23.g_74_325

seq1  AGGTGCACTTGGTGAGGGCCAGGTCCAAAGCAACCGTTCATCAAATCTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGCACTTGGTGAGGGCCAGGTCCAAAGCAACCGTTCATCAAATCTAT  50

seq1  CACTAGAGCTGGCTCGGGCCAGAAAGATGGCACCACACCTTCCTCAATGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAGAGCTGGCTCGGGCCAGAAAGATGGCACCACACCTTCCTCAATGA  100

seq1  GACAAGGCAAATGAGGGAAATCCACTCAGGTTTGAAAGACCACAGCTACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAGGCAAATGAGGGAAATCCACTCAGGTTTGAAAGACCACAGCTACC  150

seq1  CATAAATAAGAACAGCACACAGAGCCACAGAGAAGCCACAGGGAGATATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAATAAGAACAGCACACAGAGCCACAGAGAAGCCACAGGGAGATATT  200

seq1  AAGCTTTTTGTTTGTTTGTTTGTTTGTTTTGGTTGGTTGGTTGGTTGGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTTTTGTTTGTTTGTTTGTTTGTTTTGGTTGGTTGGTTGGTTGGTT  250

seq1  GG  252
      ||
seq2  GG  252