BAC Information

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BAC

Clone NameB6Ng01-044A11
Chromosome4 (Build37)
Map Location 56,950,369 - 56,951,255
singlet/doubletsinglet
Overlap geneD730040F13Rik
Upstream geneActl7b, Actl7a, Ikbkap, BC026590, Ctnnal1
Downstream gene6430704M03Rik, Epb4.1l4b, Ptpn3, LOC100041460, 1700042G15Rik, LOC100041342, LOC619973, LOC667049, Palm2, LOC100041513, Akap2, D630039A03Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-044A11.bB6Ng01-044A11.g
ACCDH869904DH869905
length8871,160
definitionDH869904|Mus musculus domesticus DNA, BAC clone: B6Ng01-044A11, 5' end.DH869905|Mus musculus domesticus DNA, BAC clone: B6Ng01-044A11, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctacaagatcaactgtaatttaaatatggtacttacatataactt
ttatttttaaaaaaactagttaaatgggggaattagaacagttcccaaac
caaaaattgtatgagtgtttctggtaaaaataaagatctatttttttttt
tttaaaagttaaatggattttgaacttttgtatgtcttaaaacaatgtac
tttattaagtatataagtatcactgcctgggtttcaaatgcctatttaaa
cataactaaatgaaaaaggaagacccaggcaggccacccatagcatcctg
tctgtgccgtgtccggaatacttacactatacagatgctgcagatattgt
gtaacatatgctctttgttgtatatatgttacaactctgtcttatttatt
taagatctggacattggtagttggctacgtgctgatggtttcattcaagt
ggaatgcaagcactcaacggtatttgagagcagtttcgattcctgtgtgg
atgatactgctttttcatataggtgagtcctttcttcttcttcaaaacag
ccgcccagtaactgtagtttaagaggctgatcagtggatgtgggtctttg
tatgttgcactagagatgctttaacatattctgtagaaactgttgcgatt
tgagctttcgctaatcttcatccaagatactctgctttcagatgttgatc
tttaagttccctatgcattctttactaagttcttgacagtaagtgtgcag
tgggtaaccttctagctcactttgcttgtggcaagcttggggaggagatg
gaaaagcacccaaggatgatgagaggcttgggccttgttgagtttgggtc
tgggtaagaaggaggtcttggggtaggaatgggtgag
gaattctcacctgaggaataccgaatggcagagaaacacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacattcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatattactactggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggcaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggataccgaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagatga
aaggatggtccatgtagagacttccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcacactagcaagattttatcgaaagg
acccagatgtagctgtctcttgtgagactatgctggggcctagcaaacac
agaagtggatgctcacagtcagctaatggatggatcacagggctcccaat
ggaggagctagagaagtaagccaaggagctaaaggatctgcaaccctata
ggcggacacattatggactaaccagtaccccgaacctctgactcagctgc
attgtatcaaagatgcctagctggcctccctggagagagccattgaaccg
caaactttttggcccttgcagggaacgccaagcgactaaagggatgtgtg
tggtaaggat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_56950369_56951255
seq2: B6Ng01-044A11.b_46_932 (reverse)

seq1  CTCCCCCATTCCTACCCCAAGACCTCCTTCTTACCCAGACCCAAACTCAA  50
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACCCATTCCTACCCCAAGACCTCCTTCTTACCCAGACCCAAACTCAA  50

seq1  CAAGGCCCAAGCCTCTCATCATCCTTGGGTGCTTTTCCATCTCCTCCCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCCCAAGCCTCTCATCATCCTTGGGTGCTTTTCCATCTCCTCCCCA  100

seq1  AGCTTGCCACAAGCAAAGTGAGCTAGAAGGTTACCCACTGCACACTTACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGCCACAAGCAAAGTGAGCTAGAAGGTTACCCACTGCACACTTACT  150

seq1  GTCAAGAACTTAGTAAAGAATGCATAGGGAACTTAAAGATCAACATCTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAGAACTTAGTAAAGAATGCATAGGGAACTTAAAGATCAACATCTGA  200

seq1  AAGCAGAGTATCTTGGATGAAGATTAGCGAAAGCTCAAATCGCAACAGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGAGTATCTTGGATGAAGATTAGCGAAAGCTCAAATCGCAACAGTT  250

seq1  TCTACAGAATATGTTAAAGCATCTCTAGTGCAACATACAAAGACCCACAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACAGAATATGTTAAAGCATCTCTAGTGCAACATACAAAGACCCACAT  300

seq1  CCACTGATCAGCCTCTTAAACTACAGTTACTGGGCGGCTGTTTTGAAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGATCAGCCTCTTAAACTACAGTTACTGGGCGGCTGTTTTGAAGAA  350

seq1  GAAGAAAGGACTCACCTATATGAAAAAGCAGTATCATCCACACAGGAATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAAGGACTCACCTATATGAAAAAGCAGTATCATCCACACAGGAATC  400

seq1  GAAACTGCTCTCAAATACCGTTGAGTGCTTGCATTCCACTTGAATGAAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTGCTCTCAAATACCGTTGAGTGCTTGCATTCCACTTGAATGAAAC  450

seq1  CATCAGCACGTAGCCAACTACCAATGTCCAGATCTTAAATAAATAAGACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGCACGTAGCCAACTACCAATGTCCAGATCTTAAATAAATAAGACA  500

seq1  GAGTTGTAACATATATACAACAAAGAGCATATGTTACACAATATCTGCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTGTAACATATATACAACAAAGAGCATATGTTACACAATATCTGCAG  550

seq1  CATCTGTATAGTGTAAGTATTCCGGACACGGCACAGACAGGATGCTATGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGTATAGTGTAAGTATTCCGGACACGGCACAGACAGGATGCTATGG  600

seq1  GTGGCCTGCCTGGGTCTTCCTTTTTCATTTAGTTATGTTTAAATAGGCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCCTGCCTGGGTCTTCCTTTTTCATTTAGTTATGTTTAAATAGGCAT  650

seq1  TTGAAACCCAGGCAGTGATACTTATATACTTAATAAAGTACATTGTTTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAACCCAGGCAGTGATACTTATATACTTAATAAAGTACATTGTTTTA  700

seq1  AGACATACAAAAGTTCAAAATCCATTTAACTTTTAAAAAAAAAAAAATAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATACAAAAGTTCAAAATCCATTTAACTTTTAAAAAAAAAAAAATAG  750

seq1  ATCTTTATTTTTACCAGAAACACTCATACAATTTTTGGTTTGGGAACTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTATTTTTACCAGAAACACTCATACAATTTTTGGTTTGGGAACTGT  800

seq1  TCTAATTCCCCCATTTAACTAGTTTTTTTAAAAATAAAAGTTATATGTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATTCCCCCATTTAACTAGTTTTTTTAAAAATAAAAGTTATATGTAA  850

seq1  GTACCATATTTAAATTACAGTTGATCTTGTAGAATTC  887
      |||||||||||||||||||||||||||||||||||||
seq2  GTACCATATTTAAATTACAGTTGATCTTGTAGAATTC  887