BAC Information

Click to search

BAC

Clone NameB6Ng01-044O02
Chromosome4 (Build37)
Map Location 79,221,260 - 79,221,801
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040026, LOC100040036, LOC667922
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-044O02.b
ACCDH870507
length1,108
definitionDH870507|Mus musculus domesticus DNA, BAC clone: B6Ng01-044O02, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatggtggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattcttgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggctttcccccac
tttctcctctataagttgcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcaattcgc
attcttctacacgataacaaccagttgtgccagcaccaattattgaaaat
gctgtcttttttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgtgttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcttgccagtccatgagtatgggagatccttccatctt
ctgagatcttctttaatttctttcttcagagacttgaagttttatcatac
tgatctttcacttccttagttagagtcatgccgagatttttaattatttg
tcactatggaaaagggtgttgtttccctaatttcttctcagcctgttatt
ctttgtgtagagaaaggcctttgactttgtttgagtaattttattccgct
tctaacgaagctgtttatcaggtttaggagttcccgggggaatttttatg
gtcactta
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_79221260_79221801
seq2: B6Ng01-044O02.b_623_1154 (reverse)

seq1  TAAGTGACCCTAAAAATTCCACCAGAGAACTCCTAAACCTGATAAACAGC  50
      ||||||||| |||||||||| || | ||||||||||||||||||||||||
seq2  TAAGTGACCATAAAAATTCC-CCCGGGAACTCCTAAACCTGATAAACAGC  49

seq1  TTCGGTGAAGTAGCTGGATATAAAATTAACTCAAAC-AAGTCAATGGCCT  99
      |||| |  || ||| ||| |||||||| |||||||| ||||||| |||||
seq2  TTCGTT--AGAAGC-GGA-ATAAAATT-ACTCAAACAAAGTCAAAGGCCT  94

seq1  TTCTCTACACAAAGAATAAACAGGCTGAGAAAGAAATTAGGGAAACAACA  149
      ||||||||||||||||| ||||||||||| ||||||||||||||||||||
seq2  TTCTCTACACAAAGAAT-AACAGGCTGAG-AAGAAATTAGGGAAACAACA  142

seq1  CCCTTCTCAATAGTCACAAATAATATAAAATATCTCGGTGTGACTCTAAC  199
      ||||| || ||||| ||||||||| ||||| |||||||  ||||||||||
seq2  CCCTTTTCCATAGTGACAAATAAT-TAAAA-ATCTCGGCATGACTCTAAC  190

seq1  TAAGGAAGTGAAAGATCTGTATGATAAAAACTTCAAGTCTCTGAAGAAAG  249
      ||||||||||||||||| ||||||| ||||||||||||||||||||||||
seq2  TAAGGAAGTGAAAGATCAGTATGAT-AAAACTTCAAGTCTCTGAAGAAAG  239

seq1  AAATTAAAGAAGATCTCAGAAGATGGAAAGATCTCCCATGCTCATGGATT  299
      |||||||||||||||||||||||||||| |||||||||| |||||||| |
seq2  AAATTAAAGAAGATCTCAGAAGATGGAAGGATCTCCCATACTCATGGACT  289

seq1  GGCAGGATCAACATTGTAAAAATGGCTATCTTGCCAAAAGCAATCTACAG  349
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAGATCAACATTGTAAAAATGGCTATCTTGCCAAAAGCAATCTACAG  339

seq1  ATTCAATGCAATCCCCATCAAAATTCCAACTCAATTCTTCAACGAATTAG  399
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  ATTCAATGCAATCCCCATCAAAATTCCAACACAATTCTTCAACGAATTAG  389

seq1  AAGGAGCAATTTGCAAATTCATCTGGAATAACAAAAAAACTAGGATAGCA  449
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AAGGAGCAATTTGCAAATTCATCTGGAATAACAAAAAACCTAGGATAGCA  439

seq1  AAAACTCTTCTCAAGGATAAAAGAACCTCTGGTGGAATCACCATGCCTGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTCTTCTCAAGGATAAAAGAACCTCTGGTGGAATCACCATGCCTGA  489

seq1  CCTAAAGCTTTACTACAGAGCAATTGTGGTAAAAACTGCATGG  542
      |||||||||||||||||||||||||||| ||||||||||||||
seq2  CCTAAAGCTTTACTACAGAGCAATTGTGATAAAAACTGCATGG  532