BAC Information

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BAC

Clone NameB6Ng01-046A02
Chromosome4 (Build37)
Map Location 8,307,106 - 8,308,154
singlet/doubletsinglet
Overlap genenone
Upstream geneCar8, LOC100039494
Downstream geneLOC100039505, LOC100039478, Rab2, EG666752, LOC666760, Chd7, LOC666782, LOC100039584, 4933402J24Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-046A02.bB6Ng01-046A02.g
ACCDH871295DH871296
length1,2001,032
definitionDH871295|Mus musculus domesticus DNA, BAC clone: B6Ng01-046A02, 5' end.DH871296|Mus musculus domesticus DNA, BAC clone: B6Ng01-046A02, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacatgataaaattaaatctacagcaaacc
agtagtcaacattaaagtaaatggtgagaagctggaagcaatcccactaa
aatcaggaactagacaaggctgcccactttctccctacctagtcaatata
atacttaaagtcctagccagagcatttcaacaacaaaaggatatcaaggg
gatacaaattggaaaggaagaagtcaaaatatcactatttgcagatgata
tgataacatatataagtgatcctaaaaattccaccagagaactcctaaac
atgataaacagcttcggtgaagtagctggatataaaattaactcaaacaa
gtcaatggcctttctctacacaaaggataaacaggctgagaaagaaatta
gggaaacaacacccttcccaatagtcacaaataatataaaataccttggt
gtgactctaactaaggaagtgaaagatctgtatgataagaactacaagtc
tctgaagaaagaaatcaaagatctcagaagatggaaagatctcccatgct
catggattggcaggatcaatatagtaaaaatggctcatcttgccaaaacc
aatctaaagattcaacacaatccccatcaaaattccaactcaattcttca
acgaattagaaaaggcaatttgcaaatacatctggaataacaaaaaaacc
taagatagcaaaaactcttctcaaagataaaaatctctggtggtatcacc
atgcctgacctaaagctttactacagagcaattgtggtaaaaactacatg
gtactggtatagcaacagacaagtagaccaatggaatagaattgaagacc
cagaaatgaacccacacacctatggtcatttgatctttgacaagggagct
aaaccatccagtggaaaaaagacagcatttcaacaaatggtgctggcaca
actggcagttatcatgtagagatcgatgatacatctatctctgtactagt
caatctagtgatcagactcacataaacagagaaactggacttaagaggag
aagtgggaaagctgagatatggcccagggaaattctgaatgaacgcatgt
gcttagatcagaatcgaaatgaactctaattgcaagcttcgtaagcaaga
ccgtctagcaagtcacgatgagacttcatctaatcaatgggacaatctca

gaattcagcaccgtatagaaaggtcacgaatttgctaccgggggcttctg
ggtagggactcttgagtactttcagattctgatatgtcttcagtagagag
tcactttggacctgtacaagacccagtgcaggatcaggtctatgctgccc
cctggtgctcatttgttttcctacatctaatttattctatatttacagtc
ttacattcaggacagatatctaaaactacaagaatcaggagggaaagatc
cagtgcagtaaagtcatagatctctatagtctctagggacctaagacaaa
tgtttttaccatgagacacaccccattttatctggaaaccagcataaata
tgtgaggaagagtacaaataacagatccaataactttaagttgtttttga
cagtaaatgattaaaagtgtttctgtttaatatgtcttaacttttaatca
ggatttattttatattccagtaaactttactttttatgtagatcagaggg
ggaaataatgcaacattttcaggcacatgtatgcacatgcatgtgtacat
atatgtatatagctttgtgtgtgtgtatgtgtgtgtgaacagatgagtgc
atccatgcatgaacatgtagaggccagaggatgacattaatgtcttctat
ttttcttctttagtctcttaagactgagtgtctcatggaacctagagctt
gctgggtttgagcaagccataaggcacttctcccagctggcacttgcgtt
acaggtgcctgagatgctcagggctttttatgtgggtgctggaagatcca
gaccgaagtcttcatgcatgtggactcttgtccactgagaatcctttcag
ctctggtatatcttaaatttgtatttccttgcatgaaaaccaaatagaag
cctgagtctctcagtcatttgactttagtcagaggctctgctttcagtca
gagtgagcgtgagaaaggtggtctgggagagcccagatcttatgtgtgga
gtaaggctctcccaccctctgtcagtacactg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_8307106_8308154
seq2: B6Ng01-046A02.g_64_1095 (reverse)

seq1  CAGTGTACTGACAGAGGGTTGGGAGAGCCATAACTCACACATAAAGATCT  50
      |||||||||||||||||| |||||||||| ||   ||||||| |||||| 
seq2  CAGTGTACTGACAGAGGG-TGGGAGAGCCTTACTCCACACAT-AAGATC-  47

seq1  GTGGCCTCTCCCAGACCACCCTGTCTCACGCTTCACTTCTGACTTGAAAG  100
       ||| ||||||||||||| ||| |||||||| |||| |||||| ||||||
seq2  -TGGGCTCTCCCAGACCA-CCTTTCTCACGC-TCAC-TCTGAC-TGAAAG  92

seq1  CCAGAGGCCTCTGACCTAAAGTTCAAATTGACTTGAAGAGACTTCAGGCT  150
       |||| |||||||| |||||| ||||| |||||   |||||| |||||||
seq2  -CAGA-GCCTCTGA-CTAAAG-TCAAA-TGACT--GAGAGAC-TCAGGCT  134

seq1  TCTATTTTGGTTTTCATGCAAGGAAATACAAATTTAAGATATACCAGAGC  200
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTA-TTTGGTTTTCATGCAAGGAAATACAAATTTAAGATATACCAGAGC  183

seq1  TGAAAGGATTCTCAGTGGACAAGAGTCCACATGCATGAAGACTTCGGTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGGATTCTCAGTGGACAAGAGTCCACATGCATGAAGACTTCGGTCT  233

seq1  GGATCTTCCAGCACCCACATAAAAAGCCCTGAGCATCTCAGGCACCTGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTTCCAGCACCCACATAAAAAGCCCTGAGCATCTCAGGCACCTGTA  283

seq1  ACGCAAGTGCCAGCTGGGAGAAGTGCCTTATGGCTTGCTCAAACCCAGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCAAGTGCCAGCTGGGAGAAGTGCCTTATGGCTTGCTCAAACCCAGCA  333

seq1  AGCTCTAGGTTCCATGAGACACTCAGTCTTAAGAGACTAAAGAAGAAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTAGGTTCCATGAGACACTCAGTCTTAAGAGACTAAAGAAGAAAAA  383

seq1  TAGAAGACATTAATGTCATCCTCTGGCCTCTACATGTTCATGCATGGATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGACATTAATGTCATCCTCTGGCCTCTACATGTTCATGCATGGATG  433

seq1  CACTCATCTGTTCACACACACATACACACACACAAAGCTATATACATATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCATCTGTTCACACACACATACACACACACAAAGCTATATACATATA  483

seq1  TGTACACATGCATGTGCATACATGTGCCTGAAAATGTTGCATTATTTCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACACATGCATGTGCATACATGTGCCTGAAAATGTTGCATTATTTCCC  533

seq1  CCTCTGATCTACATAAAAAGTAAAGTTTACTGGAATATAAAATAAATCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGATCTACATAAAAAGTAAAGTTTACTGGAATATAAAATAAATCCT  583

seq1  GATTAAAAGTTAAGACATATTAAACAGAAACACTTTTAATCATTTACTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAAAAGTTAAGACATATTAAACAGAAACACTTTTAATCATTTACTGT  633

seq1  CAAAAACAACTTAAAGTTATTGGATCTGTTATTTGTACTCTTCCTCACAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAACAACTTAAAGTTATTGGATCTGTTATTTGTACTCTTCCTCACAT  683

seq1  ATTTATGCTGGTTTCCAGATAAAATGGGGTGTGTCTCATGGTAAAAACAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATGCTGGTTTCCAGATAAAATGGGGTGTGTCTCATGGTAAAAACAT  733

seq1  TTGTCTTAGGTCCCTAGAGACTATAGAGATCTATGACTTTACTGCACTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTTAGGTCCCTAGAGACTATAGAGATCTATGACTTTACTGCACTGG  783

seq1  ATCTTTCCCTCCTGATTCTTGTAGTTTTAGATATCTGTCCTGAATGTAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTCCCTCCTGATTCTTGTAGTTTTAGATATCTGTCCTGAATGTAAG  833

seq1  ACTGTAAATATAGAATAAATTAGATGTAGGAAAACAAATGAGCACCAGGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTAAATATAGAATAAATTAGATGTAGGAAAACAAATGAGCACCAGGG  883

seq1  GGCAGCATAGACCTGATCCTGCACTGGGTCTTGTACAGGTCCAAAGTGAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGCATAGACCTGATCCTGCACTGGGTCTTGTACAGGTCCAAAGTGAC  933

seq1  TCTCTACTGAAGACATATCAGAATCTGAAAGTACTCAAGAGTCCCTACCC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTACTGAAGACATATCAGAATCTGAAAGTACTCAAGAGTCCCTACCC  983

seq1  AGAAGCCCCCGGTAGCAAATTCGTGACCTTTCTATACGGTGCTGAATTC  1049
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCCCCCGGTAGCAAATTCGTGACCTTTCTATACGGTGCTGAATTC  1032