MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-046A03
Chromosome	4 (Build37)
Map Location	52,812,895 - 52,814,070
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC384015, LOC100041026, LOC100041038, LOC666724, Smc2, LOC100040883, 4930547C10Rik, LOC100040908
Downstream gene	LOC666761, Olfr275, Olfr274-ps1, Olfr273, LOC230185, Olfr272, Olfr271-ps1, Olfr270, 1700054F22Rik, Nipsnap3a, Abca1, 4930522O17Rik, AI427809, LOC100041197, Slc44a1, Fsd1l, LOC666483, Fcmd, Tal2, LOC435784
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC384015 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:384015
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 Proteins pseudo : _no_value

name	LOC100041026 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041026
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 5 Proteins pseudo : _no_value

name	LOC100041038 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041038
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC666724 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666724
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 2 Proteins pseudo : _no_value

name	Smc2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14211 MGI:106067
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040883 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040883
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 73 ESTs, 2 Proteins

name	4930547C10Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68274 MGI:1915524
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040908 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040908
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC666761 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666761
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 70 ESTs, 4 Proteins pseudo : _no_value

name	Olfr275 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:258857 MGI:3030109
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Olfr274-ps1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:404368 MGI:3030108
definition	note : olfactory receptor 274, pseudogene 1 pseudo : _no_value

name	Olfr273 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:258821 MGI:3030107
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC230185 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:230185
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 16 Proteins pseudo : _no_value

name	Olfr272 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:258836 MGI:3030106
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Olfr271-ps1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:258856 MGI:3030105
definition	gene_synonym : MOR262-3 note : olfactory receptor 271, pseudogene 1 pseudo : _no_value

name	Olfr270 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:258600 MGI:3030104
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700054F22Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73398 MGI:1920648
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs, 2 Proteins

name	Nipsnap3a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66536 MGI:1913786
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Abca1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11303 MGI:99607
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930522O17Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78180 MGI:1925430
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	AI427809 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381524 MGI:2140270
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041197 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041197
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Slc44a1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:100434 MGI:2140592
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Fsd1l (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319636 MGI:2442443
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC666483 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666483
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 17 ESTs, 1 Protein pseudo : _no_value

name	Fcmd (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:246179 MGI:2179507
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tal2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21350 MGI:99540
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC435784 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:435784
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 7 Proteins

name	Smc2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:62990165 GeneID:14211 MGI:106067
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : structural maintenance of chromosomes 2 transcript_id : NM_008017.3

name	LOC100040883 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252387 GeneID:100040883
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 73 ESTs, 2 Proteins product : similar to RIKEN cDNA 2610030H06 gene transcript_id : XM_001475633.1

name	4930547C10Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142361472 GeneID:68274 MGI:1915524
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930547C10 gene transcript_id : NM_026652.2

name	LOC100040908 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252389 GeneID:100040908
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100040908 transcript_id : XM_001475671.1

name	Olfr275 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22129148 GeneID:258857 MGI:3030109
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactory receptor 275 transcript_id : NM_146858.1

name	Olfr273 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22129212 GeneID:258821 MGI:3030107
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactory receptor 273 transcript_id : NM_146824.1

name	Olfr272 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22129180 GeneID:258836 MGI:3030106
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactory receptor 272 transcript_id : NM_146839.1

name	Olfr270 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33238913 GeneID:258600 MGI:3030104
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactory receptor 270 transcript_id : NM_146607.1

name	1700054F22Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94371770 GeneID:73398 MGI:1920648
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs, 2 Proteins product : RIKEN cDNA 1700054F22 gene transcript_id : XM_485380.4

name	Nipsnap3a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892409 GeneID:66536 MGI:1913786
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nipsnap homolog 3A (C. elegans) transcript_id : NM_025623.2

name	Abca1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:90568037 GeneID:11303 MGI:99607
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATP-binding cassette, sub-family A (ABC1), member 1 transcript_id : NM_013454.3

name	4930522O17Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149252392 GeneID:78180 MGI:1925430
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : RIKEN cDNA 4930522O17 gene transcript_id : XM_898933.3

name	AI427809 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142348551 GeneID:381524 MGI:2140270
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : expressed sequence AI427809 transcript_id : NM_001033454.2

name	Slc44a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46358372 GeneID:100434 MGI:2140592
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 44, member 1 transcript_id : NM_133891.2

name	Fsd1l (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124248508 GeneID:319636 MGI:2442443
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : fibronectin type III and SPRY domain containing 1-like transcript_id : NM_176966.3

name	Fcmd (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142369664 GeneID:246179 MGI:2179507
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Fukuyama type congenital muscular dystrophy homolog (human) transcript_id : NM_139309.3

name	Tal2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142369795 GeneID:21350 MGI:99540
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : T-cell acute lymphocytic leukemia 2 transcript_id : NM_009317.3

name	LOC435784 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252399 GeneID:435784
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 7 Proteins product : similar to Rps15a protein transcript_id : XM_001476039.1

name	Smc2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:62990166 CCDS:CCDS18180.1 GeneID:14211 MGI:106067
definition	GO_component : GO:0005694 - chromosome [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0016887 - ATPase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0051276 - chromosome organization and biogenesis [Evidence IEA]; GO:0007067 - mitosis [Evidence IEA]; GO:0007076 - mitotic chromosome condensation [Evidence IEA] codon_start : 1 note : fibroblast growth factor inducible 16; SMC2 structural maintenance of chromosomes 2-like 1 product : structural maintenance of chromosomes 2-like 1 protein_id : NP_032043.3

name	LOC100040883 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149252388 GeneID:100040883
definition	codon_start : 1 product : similar to RIKEN cDNA 2610030H06 gene protein_id : XP_001475683.1

name	4930547C10Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13386140 CCDS:CCDS18182.1 GeneID:68274 MGI:1915524
definition	codon_start : 1 product : hypothetical protein LOC68274 protein_id : NP_080928.1

name	LOC100040908 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149252390 GeneID:100040908
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475721.1

name	Olfr275 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22129149 CCDS:CCDS18183.1 GeneID:258857 MGI:3030109
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004984 - olfactory receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS] [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007608 - sensory perception of smell [Evidence IEA] [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation note : GA_x6K02T2N78B-7168533-7167574; olfactory receptor MOR262-2 product : olfactory receptor 275 protein_id : NP_667069.1

name	Olfr273 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22129213 CCDS:CCDS18184.1 GeneID:258821 MGI:3030107
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004984 - olfactory receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS] [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007608 - sensory perception of smell [Evidence IEA] [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : GA_x6K02T2N78B-7137430-7138383; olfactory receptor MOR262-8 product : olfactory receptor 273 protein_id : NP_667035.1

name	Olfr272 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22129181 CCDS:CCDS18185.1 GeneID:258836 MGI:3030106
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004984 - olfactory receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS] [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007608 - sensory perception of smell [Evidence IEA] [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : GA_x6K02T2N78B-7084885-7085844; olfactory receptor MOR262-7 product : olfactory receptor 272 protein_id : NP_667050.1

name	Olfr270 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33238914 GeneID:258600 MGI:3030104
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004984 - olfactory receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS] [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007608 - sensory perception of smell [Evidence IEA] [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : GA_x6K02T2N78B-7025964-7025020; olfactory receptor MOR262-9 product : olfactory receptor 270 protein_id : NP_666818.1

name	1700054F22Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94371771 GeneID:73398 MGI:1920648
definition	codon_start : 1 product : hypothetical protein LOC73398 protein_id : XP_485380.4

name	Nipsnap3a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385084 CCDS:CCDS18186.1 GeneID:66536 MGI:1913786
definition	GO_component : GO:0005739 - mitochondrion [Evidence IDA] codon_start : 1 note : NIPSNAP-related protein; nipsnap homolog 3B product : nipsnap homolog 3A protein_id : NP_079899.1

name	Abca1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:90568038 CCDS:CCDS18187.1 GeneID:11303 MGI:99607
definition	GO_component : GO:0005794 - Golgi apparatus [Evidence IDA]; GO:0005887 - integral to plasma membrane [Evidence IDA]; GO:0043231 - intracellular membrane-bound organelle [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATPase activity [Evidence IEA]; GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0008203 - cholesterol metabolism [Evidence IDA]; GO:0030301 - cholesterol transport [Evidence IDA]; GO:0042158 - lipoprotein biosynthesis [Evidence IMP]; GO:0006911 - phagocytosis, engulfment [Evidence IMP]; GO:0045332 - phospholipid translocation [Evidence IMP]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : ATP-binding cassette 1 product : ATP-binding cassette 1, sub-family A, member 1 protein_id : NP_038482.3

name	4930522O17Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94371773 GeneID:78180 MGI:1925430
definition	codon_start : 1 product : hypothetical protein LOC78180 protein_id : XP_904026.2

name	AI427809 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701973 GeneID:381524 MGI:2140270
definition	codon_start : 1 product : hypothetical protein LOC381524 protein_id : NP_001028626.1

name	Slc44a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46358373 CCDS:CCDS18189.1 GeneID:100434 MGI:2140592
definition	GO_component : GO:0016021 - integral to membrane [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0015220 - choline transporter activity [Evidence IDA] GO_process : GO:0015871 - choline transport [Evidence IDA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation product : CDW92 antigen protein_id : NP_598652.2

name	Fsd1l (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28892791 GeneID:319636 MGI:2442443
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : cystatin and DUF19 domain containing 1; coiled-coil domain containing 10; FSD1 N-terminal like product : cystatin and DUF19 domain-containing protein 1 protein_id : NP_795940.1

name	Fcmd (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21314856 CCDS:CCDS18191.1 GeneID:246179 MGI:2179507
definition	GO_component : GO:0005794 - Golgi apparatus [Evidence IDA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 note : Fukuyama type congenital muscular dystrophy (fukutin) product : Fukuyama type congenital muscular dystrophy homolog protein_id : NP_647470.1

name	Tal2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678217 CCDS:CCDS18192.1 GeneID:21350 MGI:99540
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0030528 - transcription regulator activity [Evidence IEA] GO_process : GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : T-cell acute lymphocytic leukemia 2 protein_id : NP_033343.1

name	LOC435784 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149252400 GeneID:435784
definition	codon_start : 1 product : similar to Rps15a protein protein_id : XP_001476089.1

name	LOC384015 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:384015
definition	number : 1 pseudo : _no_value

name	LOC100041038 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041038
definition	number : 1 pseudo : _no_value

name	LOC100041038 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041038
definition	number : 2 pseudo : _no_value

name	LOC100041038 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041038
definition	number : 3 pseudo : _no_value

name	LOC100041038 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041038
definition	number : 4 pseudo : _no_value

name	LOC230185 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:230185
definition	number : 1 pseudo : _no_value

name	LOC230185 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:230185
definition	number : 2 pseudo : _no_value

name	LOC100041197 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041197
definition	number : 1 pseudo : _no_value

name	LOC100041197 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041197
definition	number : 2 pseudo : _no_value

name	LOC100041197 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041197
definition	number : 3 pseudo : _no_value

name	LOC100041026 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149252393 GeneID:100041026
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 5 Proteins product : similar to ribosomal protein L13 pseudo : _no_value transcript_id : XR_032371.1

name	LOC666724 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149252394 GeneID:666724
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 2 Proteins product : similar to unknown pseudo : _no_value transcript_id : XR_032387.1

name	LOC666761 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149252396 GeneID:666761
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 70 ESTs, 4 Proteins product : similar to alpha NAC/1.9.2. protein pseudo : _no_value transcript_id : XR_032444.1

name	LOC666483 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149252395 GeneID:666483
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 17 ESTs, 1 Protein product : similar to single-stranded DNA binding protein 2 pseudo : _no_value transcript_id : XR_032465.1

clone name	MSMg01-372O12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-096G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-295A09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-076H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-421O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-065M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-359D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381C01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384E03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-322L07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-268H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-236J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401A01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-217H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-424A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-146D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-510G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-395G18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-202E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-359A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-488M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-273G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337F08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-292L06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-431J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-090M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-313E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-272M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-412M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-311N14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-311O15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-520K23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-188D19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-130L11
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-424K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-172A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-117O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357L13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-317J09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380I12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-068F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-320G02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416M09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-477A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-191K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-157P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-413A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-415G03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-075I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080C21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-442K07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111D07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-177N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-496E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-045F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-296I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-386L05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-352C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-530P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-175B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-492I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-146J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-501N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-508O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336P03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-141L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-532L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-445P05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-213I03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-213H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-426D13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-480E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-157E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503H09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-071I02
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-289N07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-312N23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253K14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-005M15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-244E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-305P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-037J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-244A07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069H14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-347O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174C16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-017N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324H22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134D11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-175N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-095K06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-264M15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281J20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315P07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-071B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168H15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120N12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-255A11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-328E07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-290H18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-336K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-248E20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-332H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252C14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103K19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195C17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030E24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140J22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306J22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-295E07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340G17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-265G21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179P05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189A24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126I13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-259L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264L10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008P05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-076I04
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-046A03.b	B6Ng01-046A03.g
ACC	DH871297	DH871298
length	1,100	1,145
definition	DH871297\|Mus musculus domesticus DNA, BAC clone: B6Ng01-046A03, 5' end.	DH871298\|Mus musculus domesticus DNA, BAC clone: B6Ng01-046A03, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattccttctttatgtcctctaccatcatcatgagatatgcttttaaat ccaggtctaccttttcaggtgtgttagggtgtcctggattgggcgaagtg ggcgttctgggttctgatgatggtgagtggtcctggcttctgttagtagg attcttacgtttacctttcgccatctggcaatctctggagttagttgtta tagttgtctttgttaagagattgttcctctgttgattttgttaccgtcta tcagcaggcgtgggagacaagctctcttctctgagtttcagtggtcagag cagtctctgtaggcaagctctcctctttcagggaaggtgtacagttatct ggtgtttggacctcctcctggctgaaggtgaaggcccaaaacaggatctt tcccagaagctgtgttgctttggccaggaaggtggccagttgtctggagt cgaagatgttgccgcctgagaagctctgtggctcttgtccggaaggaggc cggccgtctggagctgaggatggcgctgcctcagaagctctgtggctctt gccggaaggtgggtggttgtctggagctgaagatggcgccgcccagaagc tctgcgactctcgcccgtcccagaaacggctggcactctgtattccacac ggtcacccgtgcagcctgccctccgcggagtcccggagccaagaaggctc ccgccggcgcctgtgccacaaacctctcagccaggcagacccccgtgctc tcaccaggaaagtggccggctgtctatggataatctttttgatctgtgtt tgaattcagttttcaagcattttattgagtatttttgtattaatgttcat gagtaaaattggtctgtaattttcttttactattgaatcttttgtgtttg ggtatcaggtactatgacctcataaatgaatttgatattcattctgtttc tattttgttgaatatttgaggaagctatattagctcttcttgaaatctga tagaattctggctaaaacatctgcaattggctttgggttaggagactctg atagttgtttcatttcttaaagtataagggctgttccattggttatcaat	gaattccatactgatttattttgaatgaccaaaaggataaagctttttgg agatagaggaatgtctcaaggtaagagtagcatcacagaatcacataggc tgctctttcattccatctaagcacagaagattgacaaaggcctatgggtg ccagagcttgcttactgggtcaaagccacctgatatggttggggccacaa ggaataaaaccaggacagttggaaggcccacaggaaaacttaacattggt aattttattgagaacaatcagactttttataccttaagctgaaacagaat acagtggcaattgccagaatcaatacagttgcagttgtcaggactcaatg atgtttgcaaactttacagggtatagagaattcatgtctaagaacaattg tcctgtcaggcttccatgtttccttcacttccaaggaaacatacagagat acatgaagtagcctgttggattagagttttcaaaaccttctttaatcagg gttctgaaatactttgactcccattttagccaccatccaaaggtagggga gaaaagatgataaataggacaagggtttgtggacctgtttagaagtagat ctttggggtaattctaatcttcattgtcaggataccaacagttcagttca ccaaacacggatcagcaccggtggcacaacccagcagaaattgccaggcc tccaccgaattggcacaaatcagcaagagcaaccaccagtaggaatacca gcatttatcaatgaattaaagatcagcaaagaagcaagaccatcgaagca aagcaagctcaacatcactatcagttgagtcctacttatactctctccaa acatcacaggtctacttcagcaaaacactacacaagtctgctttagcaag acatcacatgactctgcctcagcaaaacatcacacgacacaaccagtatc agcagcctatcacttcactgcctgaggagtgcataggtctctcgggactg gatgtcacattgtgccacaggagccatggactctaactgaatcttatgac acatgccctgaggcagctacaacctatgtcctgcatggtcagagctttct acgggaggaagaatacctaagagtaccttctgagtgggtatcagc
quality values	Open. Hide. 61 47 21 35 61 55 55 55 61 61 61 61 61 49 49 49 49 61 61 61 61 61 61 61 49 38 61 49 39 49 37 37 52 44 44 36 59 61 61 59 59 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 55 44 59 59 61 61 61 61 61 61 61 61 59 55 61 61 61 61 61 61 61 61 61 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 59 61 59 59 59 52 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 50 61 61 53 61 61 50 61 45 61 61 61 61 61 61 61 61 61 61 61 61 34 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 57 53 57 57 57 35 57 53 38 41 39 57 57 53 45 57 53 57 57 57 57 47 57 34 57 57 57 51 24 57 52 32 57 57 52 52 57 57 57 57 57 53 53 53 45 57 57 38 53 57 53 53 57 45 57 53 50 57 57 53 57 53 52 57 52 53 52 53 28 46 28 47 47 57 42 57 41 21 57 57 45 57 53 57 57 53 42 53 53 53 53 57 24 52 25 57 47 30 50 52 57 32 53 57 53 35 42 52 46 26 52 53 57 53 53 53 34 53 40 53 57 53 45 42 45 57 57 50 44 31 46 38 33 32 52 53 32 35 24 57 33 40 53 57 30 33 50 53 53 52 57 38 42 32 50 48 53 27 53 36 50 23 57 31 42 34 30 57 57 37 40 53 42 36 30 37 57 37 52 21 57 37 39 23 53 37 47 36 42 52 18 33 33 57 53 33 42 38 12 40 41 26 32 32 53 43 9 43 14 45 26 44 47 33 35 53 29 44 33 23 53 47 37 53 34 28 35 53 30 41 27 53 44 30 53 32 30 29 27 8 10 13 31 28 31 30 30 32 21 38 11 44 44 45 47 32 35 48 32 32 30 39 35 34 39 29 29 24 32 28 51 11 39 17 38 45 18 33 23 33 27 28 29 25 33 28 30 37 29 29 25 31 23 39 29 33 19 51 46 51 33 28 28 28 29 28 43 23 41 30 51 29 28 28 32 23 31 26 13 9 7 46 51 28 35 28 28 34 35 28 36 51 51 31 29 28 33 30 34 31 31 20 23 51 51 51 29 34 23 29 29 29 14 36 28 36 9 33 26 21 28 28 38 23 35 39 51 51 29 23 28 26 29 26 34 29 33 15 31 25 33 51 44 33 38 27 51 46 39 20 26 28 24 16 21 29 21 29 27 33 28 51 51 51 23 12 31 27 51 27 25 44 32 17 28 26 30 6 8 18 20 28 20 21 27 34 34 38 20 27 31 31 9 7 26 44 29 27 30 19 38 13 51 25 14 32 10 36 7 6 4 10 38 30 30 16 30 13 44 15 33 9 23 19 44 42 26 13 5 5 29 6 22 10 31 6 44 22 25 28 11 12 34 29 15 29 26 16 18 14 21 28 24 22 23 14 11 13 23 19 12 27 9 19 37 31 13 15 9 20 12 12 18 8 9 17 13 7 20 7 21 17 14 16 29 37 37 29 23 12 9 5 3 4 1 6 5 5 7 20 22 8 18 27 16 3 6 11 7 9 12 10 11 5 4 21 6 12 16 5 6 17 4 4 25 4 7 10 13 9 6 7 5 5 7 17 5 5 9 9 15 7 23 7 4 7 6 15 15 14 4 3 3 6 11 13 9 5 5 18 4 5 4 5 19 3 5 6 4 5 3	Open. Hide. 61 47 47 43 61 61 49 36 52 49 41 43 36 23 36 52 61 61 61 61 61 61 59 61 61 61 61 61 61 61 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 59 61 61 59 61 61 61 61 61 59 59 61 61 59 59 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 59 44 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 61 61 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 55 55 55 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 43 61 61 50 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 52 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 53 52 61 61 50 61 61 53 61 61 61 45 61 61 53 53 52 53 57 57 57 57 57 45 57 53 57 57 53 53 32 57 53 40 53 57 57 53 57 53 47 53 53 53 53 53 57 42 53 57 57 57 42 57 53 47 36 53 57 57 52 57 47 53 45 57 57 38 53 53 47 52 40 53 57 57 53 57 42 41 39 30 47 47 30 57 53 53 38 52 53 53 53 53 53 45 47 53 57 34 52 40 36 47 47 42 34 40 52 28 53 53 28 50 50 57 47 38 30 53 57 47 38 38 47 40 52 53 53 42 53 45 57 41 41 38 31 42 53 42 41 53 45 52 35 57 53 30 42 50 33 37 57 41 53 28 35 53 50 22 52 57 31 50 37 47 40 53 36 42 50 35 50 40 42 57 30 50 57 38 57 28 37 52 50 27 36 36 52 31 53 40 36 42 31 16 52 24 52 40 53 27 40 28 34 29 29 24 39 46 29 35 48 43 28 53 36 31 36 31 33 29 29 41 53 20 38 57 53 37 48 33 22 30 41 41 28 21 21 48 39 57 30 31 33 31 32 29 20 47 30 57 29 24 44 47 28 44 14 30 28 30 10 27 24 33 27 26 48 47 17 31 30 39 38 31 28 29 28 30 24 29 33 29 29 30 27 32 35 24 28 30 27 29 27 37 29 31 33 27 30 18 28 25 33 24 28 29 28 27 25 29 27 35 35 29 29 29 29 29 29 25 47 29 27 18 28 34 28 29 18 21 21 20 28 33 31 34 27 29 29 29 25 34 28 43 41 30 22 22 28 29 31 29 24 24 16 29 25 38 31 29 27 20 27 51 27 33 20 29 21 30 21 31 14 14 28 27 18 23 18 29 33 29 18 29 25 28 21 31 21 34 31 26 13 28 33 46 51 23 24 17 34 28 15 25 23 34 15 29 23 20 26 19 25 20 20 23 31 31 27 29 29 20 11 29 31 19 19 15 32 12 28 22 19 31 29 26 19 20 23 28 29 17 26 26 24 13 16 19 5 6 21 33 25 20 26 24 20 21 21 18 29 29 28 29 19 33 7 6 7 15 17 17 8 6 12 8 10 15 25 23 30 9 26 15 34 22 17 6 8 5 16 9 28 9 28 30 19 23 25 25 24 20 10 17 5 8 9 20 6 15 13 17 7 16 6 11 27 13 24 22 15 6 6 9 16 8 15 7 17 7 8 26 4 16 9 14 12 20 10 6 6 6 14 6 16 5 7 4 12 4 4 13 5 13 15 26 9 23 21 11 14 18 13 11 5 14 11 31 7 11 11 6 5 4 4 3 13 6 3 2 3 3 3 4 4 3 3 3 6 13 4 3 7 3 3 3 4 8 11 3 5 18 10 7 3 5 14 22 13 4 3 7 9 7 6 10

Alignment Information

BAC End 1

BAC End 2

seq1: chr4_52812895_52814070
seq2: B6Ng01-046A03.g_66_1210 (reverse)

seq1  GCTGATACCCACATCAAGAAGTACACTCTTTAAAGATGATTTCCTATCAC  50
      |||||||||||| |||  | ||  ||||||     | |  ||| |    |
seq2  GCTGATACCCAC-TCAGAAGGT--ACTCTT-----AGGTATTCTT----C  38

seq1  CTTCACAGTAGAAAGCTTCCTTGACCATTGCAGGGAACCATAGGGTTGTA  100
      ||   | ||||||||||    |||||| ||||||    |||| |||||||
seq2  CT--CCCGTAGAAAGCT---CTGACCA-TGCAGG---ACATA-GGTTGTA  78

seq1  GCTGCCTTCAGGGGCATGTGTCATTAAGATTTTCAGGTTAGAGTCCATGG  150
      |||||| ||| |||||||||||| |||||  |||| ||||||||||||||
seq2  GCTGCC-TCA-GGGCATGTGTCA-TAAGA--TTCA-GTTAGAGTCCATGG  122

seq1  CTCCTGTGGCACAATGTGACATCCAGTTCCCGAGAGACCTATGCACTCCC  200
      |||||||||||||||||||||||||| |||||||||||||||||||| ||
seq2  CTCCTGTGGCACAATGTGACATCCAG-TCCCGAGAGACCTATGCACT-CC  170

seq1  TCAGGCAGTGAAGTGATAAGGCTGCTGATACTGGTTGTGTCGTGTGATGT  250
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TCAGGCAGTGAAGTGAT-AGGCTGCTGATACTGGTTGTGTCGTGTGATGT  219

seq1  TTTGCTGAGGCAGAGTCATGTGATGTCTTGCTAAAGCAGACTTGTGTAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTGAGGCAGAGTCATGTGATGTCTTGCTAAAGCAGACTTGTGTAGT  269

seq1  GTTTTGCTGAAGTAGACCTGTGATGTTTGGAGAGAGTATAAGTAGGACTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGCTGAAGTAGACCTGTGATGTTTGGAGAGAGTATAAGTAGGACTC  319

seq1  AACTGATAGTGATGTTGAGCTTGCTTTGCTTCGATGGTCTTGCTTCTTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGATAGTGATGTTGAGCTTGCTTTGCTTCGATGGTCTTGCTTCTTTG  369

seq1  CTGATCTTTAATTCATTGATAAATGCTGGTATTCCTACTGGTGGTTGCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATCTTTAATTCATTGATAAATGCTGGTATTCCTACTGGTGGTTGCTC  419

seq1  TTGCTGATTTGTGCCAATTCGGTGGAGGCCTGGCAATTTCTGCTGGGTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGATTTGTGCCAATTCGGTGGAGGCCTGGCAATTTCTGCTGGGTTG  469

seq1  TGCCACCGGTGCTGATCCGTGTTTGGTGAACTGAACTGTTGGTATCCTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCACCGGTGCTGATCCGTGTTTGGTGAACTGAACTGTTGGTATCCTGA  519

seq1  CAATGAAGATTAGAATTACCCCAAAGATCTACTTCTAAACAGGTCCACAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGAAGATTAGAATTACCCCAAAGATCTACTTCTAAACAGGTCCACAA  569

seq1  ACCCTTGTCCTATTTATCATCTTTTCTCCCCTACCTTTGGATGGTGGCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTTGTCCTATTTATCATCTTTTCTCCCCTACCTTTGGATGGTGGCTA  619

seq1  AAATGGGAGTCAAAGTATTTCAGAACCCTGATTAAAGAAGGTTTTGAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGGAGTCAAAGTATTTCAGAACCCTGATTAAAGAAGGTTTTGAAAA  669

seq1  CTCTAATCCAACAGGCTACTTCATGTATCTCTGTATGTTTCCTTGGAAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAATCCAACAGGCTACTTCATGTATCTCTGTATGTTTCCTTGGAAGT  719

seq1  GAAGGAAACATGGAAGCCTGACAGGACAATTGTTCTTAGACATGAATTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAAACATGGAAGCCTGACAGGACAATTGTTCTTAGACATGAATTCT  769

seq1  CTATACCCTGTAAAGTTTGCAAACATCATTGAGTCCTGACAACTGCAACT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATACCCTGTAAAGTTTGCAAACATCATTGAGTCCTGACAACTGCAACT  819

seq1  GTATTGATTCTGGCAATTGCCACTGTATTCTGTTTCAGCTTAAGGTATAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTGATTCTGGCAATTGCCACTGTATTCTGTTTCAGCTTAAGGTATAA  869

seq1  AAAGTCTGATTGTTCTCAATAAAATTACCAATGTTAAGTTTTCCTGTGGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCTGATTGTTCTCAATAAAATTACCAATGTTAAGTTTTCCTGTGGG  919

seq1  CCTTCCAACTGTCCTGGTTTTATTCCTTGTGGCCCCAACCATATCAGGTG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCAACTGTCCTGGTTTTATTCCTTGTGGCCCCAACCATATCAGGTG  969

seq1  GCTTTGACCCAGTAAGCAAGCTCTGGCACCCATAGGCCTTTGTCAATCTT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGACCCAGTAAGCAAGCTCTGGCACCCATAGGCCTTTGTCAATCTT  1019

seq1  CTGTGCTTAGATGGAATGAAAGAGCAGCCTATGTGATTCTGTGATGCTAC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCTTAGATGGAATGAAAGAGCAGCCTATGTGATTCTGTGATGCTAC  1069

seq1  TCTTACCTTGAGACATTCCTCTATCTCCAAAAAGCTTTATCCTTTTGGTC  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTACCTTGAGACATTCCTCTATCTCCAAAAAGCTTTATCCTTTTGGTC  1119

seq1  ATTCAAAATAAATCAGTATGGAATTC  1176
      ||||||||||||||||||||||||||
seq2  ATTCAAAATAAATCAGTATGGAATTC  1145

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information