BAC Information

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BAC

Clone NameB6Ng01-046G14
Chromosome4 (Build37)
Map Location 139,448,965 - 139,563,965
singlet/doubletdoublet
Overlap geneGm1667, Klhdc7a
Upstream geneOtud3, Rnf186, Tmco4, Htr6, LOC665683, Nbl1, 2310028O11Rik, Hspe1-ps4, 9530077C14Rik, Capzb, Pqlc2, LOC100042808, Akr7a5, LOC625977, LOC626000, Mrto4, C230096C10Rik, Zubr1, C79267, Aldh4a1, Tas1r2, Pax7
Downstream geneIgsf21, LOC100040728, Arhgef10l, Rcc2, Padi6, Padi4, Padi3, Padi1, Padi2, Sdhb, Atp13a2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-046G14.bB6Ng01-046G14.g
ACCDH871586DH871587
length773255
definitionDH871586|Mus musculus domesticus DNA, BAC clone: B6Ng01-046G14, 5' end.DH871587|Mus musculus domesticus DNA, BAC clone: B6Ng01-046G14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(139,448,965 - 139,449,743)(139,563,711 - 139,563,965)
sequence
gaattcactcagcctctcgcagaatttgtttctgttgatctcagaacctg
catatctccagagtgcctccatgtagggctcgggtgcatctcagtataga
gagcccttacctaggctgggcaaagccctaagttctacctctagcacaag
aaagaaaaatgaagcaaacttgtagccttgaggttgagaggcatgtttgc
atggatagatggtgtatacctattgccctgtctcagggagtcctggtcga
cctccgtctcccagctatccaggcgcccacccatccctctgctctctgat
gctgactccctttttgttttttggggtacttttgcctcctgggtatgcag
gtggcttggtggtggccctttcttgggcatttctttttcaatgcaggttc
caggtctgccacacagctgtaggaagccacctcggtctttatgggagaaa
gcacctcatgtccttgaagggcttagttcaggctcagtgttgcccctgaa
agctagaggtgcaccctagctaggatgtctgccatttctgtctagttccc
ccaccccacaggattgctgtgtcttggtgggggggggggtctcccctaac
cctgccttgccccaggaggctgacagctttggacaattttgctctctggg
cctctgtttgcacctctgaggaaggcaggtggctctcatacatctgaaat
gaccagagattttggcaaaggccttgagattccttcaactatgagtattt
cagcctcccttctgctgtcaatc
ttttcagattctttttacttttttccttttgtcatgtttctagtccaggg
tggattgaaataaatgttaagattagaaacaaaaaaatggcagattcact
ctcccgtgagtgcattagacttcagtgagaagcgacggggcggaggtaga
gcaatcctgaggctctgtgctcaggaaaagagtcagagaaggtcttgaga
gtggggcagaaggccagttcagggctcctgaagagagggagggggaagaa
gggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_139448965_139449743
seq2: B6Ng01-046G14.b_46_818

seq1  GAATTCACTCAGCCTCTCGCAGAATTTGTTTCTGTTGATCTCAGAACCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCAGCCTCTCGCAGAATTTGTTTCTGTTGATCTCAGAACCTG  50

seq1  CATATCTCCAGAGTGCCTCCATGTAGGGCTCGGGTGCATCTCAGTATAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATCTCCAGAGTGCCTCCATGTAGGGCTCGGGTGCATCTCAGTATAGA  100

seq1  GAGCCCTTACCTAGGCTGGGCAAAGCCCTAAGTTCTACCTCTAGCACAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCCTTACCTAGGCTGGGCAAAGCCCTAAGTTCTACCTCTAGCACAAG  150

seq1  AAAGAAAAATGAAGCAAACTTGTAGCCTTGAGGTTGAGAGGCATGTTTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAAATGAAGCAAACTTGTAGCCTTGAGGTTGAGAGGCATGTTTGC  200

seq1  ATGGATAGATGGTGTATACCTATTGCCCTGTCTCAGGGAGTCCTGGTCGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATAGATGGTGTATACCTATTGCCCTGTCTCAGGGAGTCCTGGTCGA  250

seq1  CCTCCGTCTCCCAGCTATCCAGGCGCCCACCCATCCCTCTGCTCTCTGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCGTCTCCCAGCTATCCAGGCGCCCACCCATCCCTCTGCTCTCTGAT  300

seq1  GCTGACTCCCTTTTTGTTTTTTGGGGTACTTTTGCCTCCTGGGTATGCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGACTCCCTTTTTGTTTTTTGGGGTACTTTTGCCTCCTGGGTATGCAG  350

seq1  GTGGCTTGGTGGTGGCCCTTTCTTGGGCATTTCTTTTTCAATGCAGGTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCTTGGTGGTGGCCCTTTCTTGGGCATTTCTTTTTCAATGCAGGTTC  400

seq1  CAGGTCTGCCACACAGCTGTAGGAAGCCACCTCGGTCTTTATGGGAGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTCTGCCACACAGCTGTAGGAAGCCACCTCGGTCTTTATGGGAGAAA  450

seq1  GCACCTCATGTCCTTGAAGGGCTTAGTTCAGGCTCAGTGTTGCCCCTGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCTCATGTCCTTGAAGGGCTTAGTTCAGGCTCAGTGTTGCCCCTGAA  500

seq1  AGCTAGAGGTGCACCCTAGCTAGGATGTCTGCCATTTCTGTCTAGTTCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAGAGGTGCACCCTAGCTAGGATGTCTGCCATTTCTGTCTAGTTCCC  550

seq1  CCACCCCACAGGATTGCTGTGTCTTGGTGGGGGGGGGGGTCT-CCCTAAC  599
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CCACCCCACAGGATTGCTGTGTCTTGGTGGGGGGGGGGGTCTCCCCTAAC  600

seq1  CCTGCCTTGCCCCAGGAGGCTGACAGC-TTGGACAATTTTGCTCTCTGGG  648
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CCTGCCTTGCCCCAGGAGGCTGACAGCTTTGGACAATTTTGCTCTCTGGG  650

seq1  CCTCTGTTTGCACCTCTGAGGAAGGGCAGGTGGCTCTCATACAATCTGAA  698
      ||||||||||||||||||||||| |||||||||||||||||| |||||||
seq2  CCTCTGTTTGCACCTCTGAGGAA-GGCAGGTGGCTCTCATAC-ATCTGAA  698

seq1  ATGACCAGAGATTTTGGCAAAGGCCTTGAGATTTCTCTTTCAAACTTATG  748
      ||||||||||||||||||||||||||||||||   || |||||   ||||
seq2  ATGACCAGAGATTTTGGCAAAGGCCTTGAGAT---TCCTTCAA--CTATG  743

seq1  AGTATTTCAGCCTCCCCTTCTGCTGTCAATC  779
      ||||||||||||| |||||||||||||||||
seq2  AGTATTTCAGCCT-CCCTTCTGCTGTCAATC  773

seq1: chr4_139563711_139563965
seq2: B6Ng01-046G14.g_72_326 (reverse)

seq1  TCCCCTTCTTCCCCCTCCCTCTCTTCAGGAGCCCTGAACTGGCCTTCTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTTCTTCCCCCTCCCTCTCTTCAGGAGCCCTGAACTGGCCTTCTGC  50

seq1  CCCACTCTCAAGACCTTCTCTGACTCTTTTCCTGAGCACAGAGCCTCAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTCTCAAGACCTTCTCTGACTCTTTTCCTGAGCACAGAGCCTCAGG  100

seq1  ATTGCTCTACCTCCGCCCCGTCGCTTCTCACTGAAGTCTAATGCACTCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTCTACCTCCGCCCCGTCGCTTCTCACTGAAGTCTAATGCACTCAC  150

seq1  GGGAGAGTGAATCTGCCATTTTTTTGTTTCTAATCTTAACATTTATTTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGAGTGAATCTGCCATTTTTTTGTTTCTAATCTTAACATTTATTTCA  200

seq1  ATCCACCCTGGACTAGAAACATGACAAAAGGAAAAAAGTAAAAAGAATCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCACCCTGGACTAGAAACATGACAAAAGGAAAAAAGTAAAAAGAATCT  250

seq1  GAAAA  255
      |||||
seq2  GAAAA  255