BAC Information

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BAC

Clone NameB6Ng01-046N22
Chromosome4 (Build37)
Map Location 29,736,641 - 29,853,161
singlet/doubletdoublet
Overlap genenone
Upstream geneEpha7, LOC100040907, LOC100040811
Downstream geneLOC665185, LOC619906, LOC100040864
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-046N22.bB6Ng01-046N22.g
ACCDH871901DH871902
length1,1581,062
definitionDH871901|Mus musculus domesticus DNA, BAC clone: B6Ng01-046N22, 5' end.DH871902|Mus musculus domesticus DNA, BAC clone: B6Ng01-046N22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(29,851,998 - 29,853,161)(29,736,641 - 29,737,653)
sequence
gaattctagatgtatggatagaagttttctaaaatttgaaaactctatca
gtccacaaaatttatgatttcttttatcagaaagttaaatctctatctca
acagaaattgcagttttctatttcatatttttgttgctataaactttaag
acagttttggtttagattctcatgttttacttcttcttttattctagtta
aatctactattaataaagaaatggcttgctatatatagaagttgggttgg
tggtatggtccttgccaagcatcccaagaattccatgttcaatacccagt
attagacaaagaaaagattgagatgagtacacagggagtcataatgaggc
agacagacacagctgaagagttttgagcatgcagtttaaaacattcccat
cataagcaaatggttagcaaacacatagacaaaataaatctacaagctag
aatctactgttgtgccatatgtttatttgttcctgggctttgtgtgatgg
gcagttcttgattgtgaagggtattcttatccattctctcttctgtaagc
tctccctctaacctaccttggtcactttcacttgattggcgttcactggg
acatttctttcaccacattcatctctttatgggtcttatgtacaagtgct
ttataatggagacttattatcattgaatccaataaatcaatttcgtttag
aagctttctatcattacattaactctgctttaaacttctacatacatgca
caaaatgggttctattttcagttcttatacaaaagaaatatggtgtcaca
tcaaaatccccctcaagcacacatttttctgctggtcctcactaatggca
tgattgttatcagtcattagaaccaacaatctccacttccatcctggctt
attcccttctggtgtccatttgtcattcaatttgtttgtgtctgatccca
taatttcttgtctttagtccgtttcctctttccattcaacttcctttata
atttctgttctgtttcttgaatattccccttcaattgattaccacctact
ttttaattttcataatataagtggttatctgttttacatttcttcttaag
gcgttgttcaaaaaatcacaaatacggacttcttgctatcaatttcagtt
taaagatg
gaattcataggcatattgattttttctagttccatccatttctctgaaaa
tttcacaatgtcttttttttctaacagatgtgtaatattgcattatgcaa
atgtgctacactttctttctttgttatttatttgagagatatctgggttg
tttggaatttctgactattaagaataaagctgctgttaacacagttgaac
aagtatccttgttgtatagtggaacatcttttggttacatgaccaagggt
ggtattgctggatctagaggtaggtacagtttcaactttctgagcaaata
ctataatgattttcatagttgctatatgagtttgcattcctattatcaat
ggaagagttgttgatattagccattctgtcaggcataagacagaatctca
aagtaactttgatttgtgtttccctgatggctaaagatgttgaatatttc
tttgagtgttttttggccatttccgattcagttctctgtttagatgtata
acccattttttttttaattggatcatttgatttgttgatgtatggagttc
tttatgctttgatgtcccgagcttgtgcctcaccagcaagaacatactcg
gacaacaggattcttctgtagcaagctttattgcttcattaggaggaaga
ccctgaaccccggaaatggcgctgcttatataggcctaggagaggcctgt
ctatacttgattggttatgctttcagtaccccacccacatgcctcaggcc
aggcagtgactcagcaaaaaactctatggcacatgtgcacattggttgtt
tacccatattcatgggcgtcggcttactgaaaccagcgccatcttgtaat
ggcgtttgtggcttcccacactttggatttagtcctctattggatgtaga
gttagtcaaaatcttttcccattctgtatgtctttgacttgcagatgctt
ttcagttcatgaggtcccatttataatgccaatctagtgactctactatt
aagttctgttagaaaattgatgcccctcattttcccacaaacacttattt
ctactcccatca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_29851998_29853161
seq2: B6Ng01-046N22.b_45_1202 (reverse)

seq1  CATC-TAAAACTGAAAATTGATAGACAAGGAAGTCTGTATTTGTGATTTT  49
      |||| | |||||| |||||||||| ||| |||||| ||||||||||||||
seq2  CATCTTTAAACTG-AAATTGATAG-CAA-GAAGTCCGTATTTGTGATTTT  47

seq1  TTGAACAAACGACTTTAAGATAGAAATGTAGAACAGATAACAACTAATA-  98
      |||||| |||| | |||||| ||||||||| |||||||||| ||| ||| 
seq2  TTGAAC-AACG-CCTTAAGA-AGAAATGTAAAACAGATAACCACTTATAT  94

seq1  TATGAAAAATAAAAAGTAGGTGGTAATCAAATTGAAGGGGAATATTCAAG  148
      |||||||| ||||||||||||||||||| |||||||||||||||||||||
seq2  TATGAAAATTAAAAAGTAGGTGGTAATC-AATTGAAGGGGAATATTCAAG  143

seq1  AAACAGAACAGAAATAATAAAGAAAGTTGAATGGAAAGAGGAAACGGACT  198
      ||||||||||||||| |||||| |||||||||||||||||||||||||||
seq2  AAACAGAACAGAAATTATAAAGGAAGTTGAATGGAAAGAGGAAACGGACT  193

seq1  AAAGACAAGAAATTATGGGATCAGACACAAAACAAATTGAATGACAAATG  248
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  AAAGACAAGAAATTATGGGATCAGACAC-AAACAAATTGAATGACAAATG  242

seq1  GACACCAGAAGGGAATAAGCCAGGATGGAAGTGGAGATTGTTGGTTCTAA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACCAGAAGGGAATAAGCCAGGATGGAAGTGGAGATTGTTGGTTCTAA  292

seq1  TGACTGATAACAATCATGCCATTAGTGAGGACCAGCAGAAAAATGTGTGC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGATAACAATCATGCCATTAGTGAGGACCAGCAGAAAAATGTGTGC  342

seq1  TTGAGGGGGATTTTGATGTGACACCATATTTCTTTTGTATAAGAACTGAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGGGGATTTTGATGTGACACCATATTTCTTTTGTATAAGAACTGAA  392

seq1  AATAGAACCCATTTTGTGCATGTATGTAGAAGTTTAAAGCAGAGTTAATG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGAACCCATTTTGTGCATGTATGTAGAAGTTTAAAGCAGAGTTAATG  442

seq1  TAATGATAGAAAGCTTCTAAACGAAATTGATTTATTGGATTCAATGATAA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGATAGAAAGCTTCTAAACGAAATTGATTTATTGGATTCAATGATAA  492

seq1  TAAGTCTCCATTATAAAGCACTTGTACATAAGACCCATAAAGAGATGAAT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTCTCCATTATAAAGCACTTGTACATAAGACCCATAAAGAGATGAAT  542

seq1  GTGGTGAAAGAAATGTCCCAGTGAACGCCAATCAAGTGAAAGTGACCAAG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGAAAGAAATGTCCCAGTGAACGCCAATCAAGTGAAAGTGACCAAG  592

seq1  GTAGGTTAGAGGGAGAGCTTACAGAAGAGAGAATGGATAAGAATACCCTT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGTTAGAGGGAGAGCTTACAGAAGAGAGAATGGATAAGAATACCCTT  642

seq1  CACAATCAAGAACTGCCCATCACACAAAGCCCAGGAACAAATAAACATAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAATCAAGAACTGCCCATCACACAAAGCCCAGGAACAAATAAACATAT  692

seq1  GGCACAACAGTAGATTCTAGCTTGTAGATTTATTTTGTCTATGTGTTTGC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACAACAGTAGATTCTAGCTTGTAGATTTATTTTGTCTATGTGTTTGC  742

seq1  TAACCATTTGCTTATGATGGGAATGTTTTAAACTGCATGCTCAAAACTCT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCATTTGCTTATGATGGGAATGTTTTAAACTGCATGCTCAAAACTCT  792

seq1  TCAGCTGTGTCTGTCTGCCTCATTATGACTCCCTGTGTACTCATCTCAAT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTGTGTCTGTCTGCCTCATTATGACTCCCTGTGTACTCATCTCAAT  842

seq1  CTTTTCTTTGTCTAATACTGGGTATTGAACATGGAATTCTTGGGATGCTT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCTTTGTCTAATACTGGGTATTGAACATGGAATTCTTGGGATGCTT  892

seq1  GGCAAGGACCATACCACCAACCCAACTTCTATATATAGCAAGCCATTTCT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAGGACCATACCACCAACCCAACTTCTATATATAGCAAGCCATTTCT  942

seq1  TTATTAATAGTAGATTTAACTAGAATAAAAGAAGAAGTAAAACATGAGAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAATAGTAGATTTAACTAGAATAAAAGAAGAAGTAAAACATGAGAA  992

seq1  TCTAAACCAAAACTGTCTTAAAGTTTATAGCAACAAAAATATGAAATAGA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAACCAAAACTGTCTTAAAGTTTATAGCAACAAAAATATGAAATAGA  1042

seq1  AAACTGCAATTTCTGTTGAGATAGAGATTTAACTTTCTGATAAAAGAAAT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGCAATTTCTGTTGAGATAGAGATTTAACTTTCTGATAAAAGAAAT  1092

seq1  CATAAATTTTGTGGACTGATAGAGTTTTCAAATTTTAGAAAACTTCTATC  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAATTTTGTGGACTGATAGAGTTTTCAAATTTTAGAAAACTTCTATC  1142

seq1  CATACATCTAGAATTC  1164
      ||||||||||||||||
seq2  CATACATCTAGAATTC  1158

seq1: chr4_29736641_29737653
seq2: B6Ng01-046N22.g_126_1128

seq1  GTCTTTTTTTTCTAACAGATGTGTAATATTGCATTATGCAAATGTGCTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTTTTTTCTAACAGATGTGTAATATTGCATTATGCAAATGTGCTAC  50

seq1  ACTTTCTTTCTTTGTTATTTATTTGAGAGATATCTGGGTTGTTTGGAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCTTTCTTTGTTATTTATTTGAGAGATATCTGGGTTGTTTGGAATT  100

seq1  TCTGACTATTAAGAATAAAGCTGCTGTTAACACAGTTGAACAAGTATCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACTATTAAGAATAAAGCTGCTGTTAACACAGTTGAACAAGTATCCT  150

seq1  TGTTGTATAGTGGAACATCTTTTGGTTACATGACCAAGGGTGGTATTGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTATAGTGGAACATCTTTTGGTTACATGACCAAGGGTGGTATTGCT  200

seq1  GGATCTAGAGGTAGGTACAGTTTCAACTTTCTGAGCAAATACTATAATGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTAGAGGTAGGTACAGTTTCAACTTTCTGAGCAAATACTATAATGA  250

seq1  TTTTCATAGTTGCTATATGAGTTTGCATTCCTATTATCAATGGAAGAGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCATAGTTGCTATATGAGTTTGCATTCCTATTATCAATGGAAGAGTT  300

seq1  GTTGATATTAGCCATTCTGTCAGGCATAAGACAGAATCTCAAAGTAACTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGATATTAGCCATTCTGTCAGGCATAAGACAGAATCTCAAAGTAACTT  350

seq1  TGATTTGTGTTTCCCTGATGGCTAAAGATGTTGAATATTTCTTTGAGTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTGTGTTTCCCTGATGGCTAAAGATGTTGAATATTTCTTTGAGTGT  400

seq1  TTTTTGGCCATTTCCGATTCAGTTCTCTGTTTAGATGTATAACCCATTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGGCCATTTCCGATTCAGTTCTCTGTTTAGATGTATAACCCATTTT  450

seq1  TTTTTTAATTGGATCATTTGATTTGTTGATGTATGGAGTTCTTTATGCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTAATTGGATCATTTGATTTGTTGATGTATGGAGTTCTTTATGCTT  500

seq1  TGATGTCCCGAGCTTGTGCCTCACCAGCAAGAACATACTCGGACAACAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTCCCGAGCTTGTGCCTCACCAGCAAGAACATACTCGGACAACAGG  550

seq1  ATTCTTCTGTAGCAAGCTTTATTGCTTCATTAGGAGGAAGACCCTGAACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTCTGTAGCAAGCTTTATTGCTTCATTAGGAGGAAGACCCTGAACC  600

seq1  CCGGAAATGGCGCTGCTTATATAGGCCTAGGAGAGGCCTGTCTATACTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGAAATGGCGCTGCTTATATAGGCCTAGGAGAGGCCTGTCTATACTTG  650

seq1  ATTGGTTATGCTTTCAGTACCCCACCCACATGCCTCAGGCCAGGCAGTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGTTATGCTTTCAGTACCCCACCCACATGCCTCAGGCCAGGCAGTGA  700

seq1  CTCAGCAAAAAACTCTATGGCACATGTGCACATTGGTTGTTTACCCATAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCAAAAAACTCTATGGCACATGTGCACATTGGTTGTTTACCCATAT  750

seq1  TCATGGGCGTCGGCTTACTGAAACCAGCGCCATCTTGTAATGGCGTTTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGGCGTCGGCTTACTGAAACCAGCGCCATCTTGTAATGGCGTTTGT  800

seq1  GGCTTCCCACACTTTGGATTTAGTCCTCTATTGGATGTAGAGTTAGTCAA  850
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GGCTTCCCACACTTTGGATTTAGTCCTCTATTGGATGTAGAGTTAGTC-A  849

seq1  AAATCTTTTCCCATTCTGTAATGTCCTTTGACTTGCAGATGCTTTTCAGT  900
      ||||||||||||||||||| |||| |||||||||||||||||||||||| 
seq2  AAATCTTTTCCCATTCTGT-ATGT-CTTTGACTTGCAGATGCTTTTCAG-  896

seq1  TTCATGAGGTCCCATTTATTAATTGCCAATCTTAGTGACTCTACTATTTA  950
      |||||||||||||||||||  | |||||||| |||||||||||||| |||
seq2  TTCATGAGGTCCCATTTAT--AATGCCAATC-TAGTGACTCTACTA-TTA  942

seq1  AGTTCTGTTTAGAAAATTGATGCCACTCATTTACCCCACAAACACACTAT  1000
      ||||||| |||||||||||||||| |||||||  |||||||||||  |||
seq2  AGTTCTG-TTAGAAAATTGATGCCCCTCATTT-TCCCACAAACAC-TTAT  989

seq1  TTCTACT-CCATCA  1013
      ||||||| ||||||
seq2  TTCTACTCCCATCA  1003