BAC Information

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BAC

Clone NameB6Ng01-047K19
Chromosome4 (Build37)
Map Location 73,296,042 - 73,297,211
singlet/doubletsinglet
Overlap genenone
Upstream geneAldoa-ps2, EG384113, LOC667713, LOC100039698, OTTMUSG00000001246, LOC100039726, LOC667722, LOC623115, OTTMUSG00000000281, OTTMUSG00000000280
Downstream geneOTTMUSG00000000282, OTTMUSG00000000283, Gm428, Rasef, LOC667768, LOC545637, LOC623272, OTTMUSG00000014862, OTTMUSG00000004010, 2310002L09Rik, Frmd3, LOC100039774, Jmjd2c, LOC100040258
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-047K19.bB6Ng01-047K19.g
ACCDH872473DH872474
length1,223934
definitionDH872473|Mus musculus domesticus DNA, BAC clone: B6Ng01-047K19, 5' end.DH872474|Mus musculus domesticus DNA, BAC clone: B6Ng01-047K19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacacgataaaagcaatctacaggaaacca
gtagccaacatcaaagtaaatggagagaagctggaagcaatcccactaaa
atcagggactagacaaggctgcccactttctccctaccttttcaacatag
tacttgaagtattaggcagagcaattcgacaacaaaagaagatcaagggg
atacaaattggaaaggaggaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccctaaaaattccaccagagaactcctaaacc
tgataaacagcttcggtgaagtagctggatataaaattaactcaaacaag
tcaatggcctttctctacacaaagaataaacaggctgagaaagaaattag
ggaaacaacacccttctcaatagtcacaaataatataaaatatctcggcg
tgactctaactaaggaagtaaaagatctgtatgataaaaacttcaagtct
ctgaagaaagaaattaaagaagatctcagaagatggaaagatctcccatg
ctcatggattggcaggatcaacattgtaaaaatggctatcttgccaaaag
caatctacagattcaatgcaatccccatcaaaattccaactcaattcttc
aacgaattagaaggagcaatttgcaaattcatctggaataacaaaaaacc
taggatagcaaaaactcttctcaaggataaaagaacctctggtggaatca
ccatgcctgacctaaagctttactacagagcaattgtggtaaaaactgca
tggtactggtatagagacagacaagtaggccaatggaatagaattgaaga
ccagaaatgaacccacacacctatggtcacttgatcttcgacaagggagc
taaaccatccagtgagaaagacagcatttcacatgtgatgcacaactgtg
tatgatgtagagatgcgatcgatcatactatctcttgtactagtcaatct
aatgatcaaggacttccataaaaccagagacctcactatagaggagaaat
gggaaagcttgagattgggcactgagaaatcgaatggcgagaatcactgg
aaaatgtccacatcttatcatcaggatgccaacaacaccttggatttccg
ctcaacagtcatggctaatcaatcaggttacgcaattgtgaaagagagac
ctctcatagttgaggtattcact
gaattcttcagtcctaatttatcaactgcaactatggctgcaccttcaca
cacaggcttccctaggtgctgaaggcaatggcaaccccacagtcacatct
aacctggatacctgggaacacctagagtctgacctaccaaaaaaagagca
tacatgcaatgatctgaggccttaggcacataagtagcatagggctggct
tgtctagcctcagtgggagaggatgatcttaaacctacatagactttatg
catcagggtagaggtaatacccagggagtccacttactcagagattaagg
ggagatttggagggggacagcctttgggatgaaaatatattaatgagttt
tatatgaaagaaaaaggaaaaaaaaacaatttaaaataaacaaacaacaa
aacattaagaaaacaacaacaacaacaaagggccttccctggtatctctg
acagccaaggctcagctgctctccacaacccctgcatatcttaaaaatca
gtaccacctgggtgaatctcaccgattaccacgtccagctacagcatgag
gtacaatcttggcaatctctggaacacagtttcttagtactctcagatca
cacttcccagaagatttcacctcagtgatggtggtctctttataataccc
tctaatttctatgctctattcaaccagcatcaattgtcccactaacctcc
tctattcctgattcgagacctagagtcacattgaagtggaaactcctagt
ttctttgcaaagttaattatatcaaaggatgttttattgaggcacagagg
tgaaaggatgtctccccgaggaagacacgggtaaaggatgatttgctgaa
gcagacaaagtgaaaggatgtttgatatagcaacatgtgaaaggacctgt
gatttggcatataatgactctacaacatagggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_73296042_73297211
seq2: B6Ng01-047K19.g_73_990

seq1  TTCTTCAGTCCTAATTTATCAACTGCAACTAGGGCTGCACCTTCACACAC  50
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TTCTTCAGTCCTAATTTATCAACTGCAACTATGGCTGCACCTTCACACAC  50

seq1  AGCCTTCCCTAGGTGCTGAAGGCAATGGCAACCCCACAGTCACATCTAAC  100
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTCCCTAGGTGCTGAAGGCAATGGCAACCCCACAGTCACATCTAAC  100

seq1  CT-CATACCTGGGAACATCTAGAATCTGACTTACCAAGCAAAGAGCATAC  149
      ||  ||||||||||||| ||||| |||||| ||||||  |||||||||||
seq2  CTGGATACCTGGGAACACCTAGAGTCTGACCTACCAAAAAAAGAGCATAC  150

seq1  ATGCAATGATCTGAGGCCTTAGGCACATAAGTAGCATAGGGCTGGCTTGT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAATGATCTGAGGCCTTAGGCACATAAGTAGCATAGGGCTGGCTTGT  200

seq1  CTAGCCTCAGTGGGAGAGGATGAACTTAAACCTGCATAGACTTTATGCAT  249
      ||||||||||||||||||||||| ||||||||| ||||||||||||||||
seq2  CTAGCCTCAGTGGGAGAGGATGATCTTAAACCTACATAGACTTTATGCAT  250

seq1  CAGGGTAGAGGTAATACCCAGGGAGTCCACCTACTCAGAGATCAAGGGGA  299
      |||||||||||||||||||||||||||||| ||||||||||| |||||||
seq2  CAGGGTAGAGGTAATACCCAGGGAGTCCACTTACTCAGAGATTAAGGGGA  300

seq1  GATTTGGAGAGGGGCCAGCCTTTTGGGTGAAAATTTATTGATGAGTTTTA  349
      ||||||||| |||| |||||||| || ||||||| |||| ||||||||||
seq2  GATTTGGAG-GGGGACAGCCTTTGGGATGAAAATATATTAATGAGTTTTA  349

seq1  TATGAAAGAAAAAGGAAAGAAACAGTTAAAAATAAACGAACTAGCCGGCA  399
      ||||||||||||||||||                                
seq2  TATGAAAGAAAAAGGAAA--------------------------------  367

seq1  TGGTGGCGCACGCCTTTAATCCCAGCACTTGGGTGGCAGAGGCAGGTGGA  449
                                                        
seq2  --------------------------------------------------  367

seq1  TTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAGTGAGTTCCAGGGCAGCC  499
                                                        
seq2  --------------------------------------------------  367

seq1  AGGGCTACACAGAGAAACCCTGTCTCCAGGAAAAAAAAAAAAAAAAAAAA  549
                                                        
seq2  --------------------------------------------------  367

seq1  ACGCTCAAATCCCAAAACCAAAACTAAAAAAACGAAAAAAACCAAAACAA  599
                                                        
seq2  --------------------------------------------------  367

seq1  AGAACAAAGAACAAAAAACAAAAAATAAATAAATAAACAAACTACAAAAC  649
                  |||||||||   |     |||||||||||| |||||||
seq2  ------------AAAAAACAATTTA-----AAATAAACAAACAACAAAAC  400

seq1  ATTAAGAAAACAACAACAAC-ACAAAGGGCCTTCCCTGATAACTCTGAGA  698
      |||||||||||||||||||| ||||||||||||||||| || |||||| |
seq2  ATTAAGAAAACAACAACAACAACAAAGGGCCTTCCCTGGTATCTCTGACA  450

seq1  GCCAAGGCTCAGCTGCTCTCCACTACCCCTTCATAACTTAAAAATCAGTA  748
      ||||||||||||||||||||||| |||||| |||| ||||||||||||||
seq2  GCCAAGGCTCAGCTGCTCTCCACAACCCCTGCATATCTTAAAAATCAGTA  500

seq1  CCACCTGGATGAATCTCACCGATTACCACGTCCAGCTACAGTATGAGGTA  798
      |||||||| |||||||||||||||||||||||||||||||| ||||||||
seq2  CCACCTGGGTGAATCTCACCGATTACCACGTCCAGCTACAGCATGAGGTA  550

seq1  CAATCTTGGCAATCTCTGGAACACAGCTTCTTAGTACTCTCAGATCACAC  848
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CAATCTTGGCAATCTCTGGAACACAGTTTCTTAGTACTCTCAGATCACAC  600

seq1  TTCCCAGAAGATTTCTCCTCAGTGATGGTGGTCCCTTTATAATACCCTCT  898
      ||||||||||||||| ||||||||||||||||| ||||||||||||||||
seq2  TTCCCAGAAGATTTCACCTCAGTGATGGTGGTCTCTTTATAATACCCTCT  650

seq1  AATTTCTATGCATTATTCAACCAGCATCAATTGTCCCACTAACCTCCTCT  948
      |||||||||||  |||||||||||||||||||||||||||||||||||||
seq2  AATTTCTATGCTCTATTCAACCAGCATCAATTGTCCCACTAACCTCCTCT  700

seq1  ATTCCTGATTTGAGAGCTAGAATCACATTGAAGTGGAAACTCCTAGTTT-  997
      |||||||||| |||| ||||| ||||||||||||||||||||||||||| 
seq2  ATTCCTGATTCGAGACCTAGAGTCACATTGAAGTGGAAACTCCTAGTTTC  750

seq1  TTTGCAAAGTTAATTATTTGAAAGGATGTTTTCTTGAGGCACAGAGGTGA  1047
      ||||||||||||||||| | |||||||||||| |||||||||||||||||
seq2  TTTGCAAAGTTAATTATATCAAAGGATGTTTTATTGAGGCACAGAGGTGA  800

seq1  AAGGATGTCTCCCTGAGGAAGACACGGGTAAAGGATGTTTTGCTGAAGCA  1097
      ||||||||||||| ||||||||||||||||||||||| ||||||||||||
seq2  AAGGATGTCTCCCCGAGGAAGACACGGGTAAAGGATGATTTGCTGAAGCA  850

seq1  GAAACAGGTGAAAGGATATTTGATATAGCAAACATGTGAAAGGACCTGTG  1147
      || | | |||||||||| ||||||||||| ||||||||||||||||||||
seq2  GACA-AAGTGAAAGGATGTTTGATATAGC-AACATGTGAAAGGACCTGTG  898

seq1  ATGTTGGCGTATAAAATGACTCT  1170
      || |||||  ||| |||||||||
seq2  AT-TTGGC--ATATAATGACTCT  918