BAC Information

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BAC

Clone NameB6Ng01-047L24
Chromosome4 (Build37)
Map Location 145,587,134 - 145,588,119
singlet/doubletsinglet
Overlap genenone
Upstream geneVps13d, Tnfrsf1b, Tnfrsf8, LOC666282, 9230115A19Rik, LOC195576, LOC622846, LOC666314, LOC545701, OTTMUSG00000010965, LOC666334, LOC545703, LOC384081, LOC100041379, LOC666349, LOC666351, LOC545704, 1700029I01Rik, LOC236069, LOC384084
Downstream geneLOC666386, LOC666390, LOC100041433, LOC433790, LOC433791, Rex2, LOC100043012, LOC100041461, LOC630093, OTTMUSG00000010105, LOC666445, MGC117846, OTTMUSG00000010694, LOC626480, LOC666474, LOC666482, LOC434514, LOC626288, LOC666498, LOC100043034, LOC666514, LOC100041561, LOC100041570, OTTMUSG00000010657, LOC384087, LOC666546
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-047L24.bB6Ng01-047L24.g
ACCDH872523DH872524
length9351,188
definitionDH872523|Mus musculus domesticus DNA, BAC clone: B6Ng01-047L24, 5' end.DH872524|Mus musculus domesticus DNA, BAC clone: B6Ng01-047L24, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttctaagcccacctacttatgggccttttaattaattagcttcc
cacttcttcacagcaatgtttggtgttttgaatttttgcttgcttgcttg
cttgcttactcgtttctttgcttttaatttgtctttttcttaaacccatc
taatcgtgcaggaatcccacactccccatcaggaaccactcctccaactc
tgatgcaggctgccttccacacaacttcccaggacctactctgcacaact
tcttcacaaagttgctgccagactagaccagagctggatgtagtaggaca
ctacacctgggttctgaacccttcagatacaatggatcctgtctaacttc
tcatattgtgcgtgtagccctctgggctataaatgcacaaaattaagcag
tccctttgaattctgatgctcagaacagatacccaaaacaaacaaaaacg
tagataaaatgtccttggctcaaaccacaaaccatagaggtatcttataa
ggagcacaatttatgtgatatccaagacaaagaatggaaaacccacagtc
atgatcaaggacatgaaagtttgtaaaccatgtgaatccactcagacaga
aacaaaatgaatcttgggcaagaaaataataccagatgcctgaaggaaat
aaggacaatataaaatattaaaattgagttcaataggtgcttagaaatac
cacaaaaaaaaaaaaaaaatcctgaagagaaaatgcagtgaggcaaataa
aaatgatacatagagaacctgtgggagacagattatcagacttaaagaaa
aagtagaggagtggatgcctcaatcaaagaaaatggtgaattaaaatgat
gttaggtcaagggacatattatttactgcttgaagatgagcaataaagag
aactccttggaaactgtctgatcttgtcaaaaaaa
gaattcatacaggagagaaaccttacaaatgtaatgagtgtgacaaatgc
tttactgacaaaggcagtctgagagttcatcagagaattcatacaggaga
gaaaccttacaaatgcagtgagtgtgacaaatgctttacccaaccatccc
atcttagtattcatcgtagaattcattcaggagagaaaccttacaaatgt
agtgaatgcgacaaatgctttacccaaccatcccctcttagtattcatcg
tagaattcattcaggagagaaaccttacaaatgtagtgaatgcgacaaat
gctttactgacaaaggcagtctcagagttcatcagagaattcatatagga
gagaaaccgtacaaatgcagtgagtgtgacaaatgctttacccaaccatc
ccatcttagtattcatcgtagaattcattcaggagagaaaccttacaaat
gtagtgaatgcgacaaatgctttactgacaaaagcagtctgagagttcat
cagagaattcatacaggagagaaaccgtaccaatgcagtgagtgtgacaa
atgctttactgacaaaggcagtcttagagttcatcatagaattcatgcag
gagagaaaccttacaaatgtagtgaatgcgacaaatgctttactgacaaa
ggctatctgagagttcatcatagaattcatgcaggagagaaaccttacaa
atgtagtgaatgtgacaaatgctttactcacaaaggctctctgagagttc
atcatagaattcatgcaggagagaaaccttacaaatgtagtgaatgtgac
aaatgttttactgagaaaacagtctgagacgcatcagagattcatacagg
agagaaccttataaatgcatgaatgcgacaatgctttactcgaaatcaca
tctagtatcatcagagattcatacaggagagaactgtacaatgcagtgat
gtgacaatgcttactgacaagcagtctagagtcatcatagatcatgcagg
aaagaacttacaatgtatgatgtgacaatgcttactccagctctctgaag
tctctgatctgcggaagaactcaatgtatgattgacatgtttactggaaa
cgctggaaggctcgaattcatacggagaacttatgctgtatgccaatgct
accgaatcaccttgtatcctcagaatctctaccggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_145587134_145588119
seq2: B6Ng01-047L24.b_45_979

seq1  GAATTCTTCTAAGCCCACCTACTTATGGGCCTTTTAATTAATTAGCTTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTAAGCCCACCTACTTATGGGCCTTTTAATTAATTAGCTTCC  50

seq1  CACTTCTTCACAGCAATGTTTGGTGTTTTGAATTTTTGCTTGCTTGCTTG  100
      |||||||||||||||||||||||||||||||||||               
seq2  CACTTCTTCACAGCAATGTTTGGTGTTTTGAATTT---------------  85

seq1  CTTGCTTGCTTGCTTGCTTGCTTGCTTGCTTGCTTGCTTGCTTGCTTGCT  150
                                       |||||||||||||||||
seq2  ---------------------------------TTGCTTGCTTGCTTGCT  102

seq1  TGCTTATTCGTTTCTTTGCTTTTAATTTGTCTTTTTCTTAAACTCATCTA  200
      |||||| |||||||||||||||||||||||||||||||||||| ||||||
seq2  TGCTTACTCGTTTCTTTGCTTTTAATTTGTCTTTTTCTTAAACCCATCTA  152

seq1  ATCGTGCAGGAATCCCACACTCCCCATCAGGAACCACTCCTCCAACTCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGTGCAGGAATCCCACACTCCCCATCAGGAACCACTCCTCCAACTCTG  202

seq1  TTGCAGGCTGCCTTCCACACAACTTCCCAGGACCTACTCTGCAAAGCTTC  300
       |||||||||||||||||||||||||||||||||||||||||| | ||||
seq2  ATGCAGGCTGCCTTCCACACAACTTCCCAGGACCTACTCTGCACAACTTC  252

seq1  TTCACAAAGTTGCTGCCAGACTAGACCAGAGCTGGATGTAGTAGGACACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACAAAGTTGCTGCCAGACTAGACCAGAGCTGGATGTAGTAGGACACT  302

seq1  GCACCTGGGTTCTGAACCCTTCAGATTCAATGGATCCTGTCTAACTTCTC  400
       ||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  ACACCTGGGTTCTGAACCCTTCAGATACAATGGATCCTGTCTAACTTCTC  352

seq1  ATATTGTGCGTGTAGCCCTCTGGGCTATAAATGCACAAAATTAAGCAGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGTGCGTGTAGCCCTCTGGGCTATAAATGCACAAAATTAAGCAGTC  402

seq1  CCTTTGAATTCTGATGCTCAGAACAGATACCCAAAACAAACAAAAACGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGAATTCTGATGCTCAGAACAGATACCCAAAACAAACAAAAACGTA  452

seq1  GATAAAATGTCCTTGGCTCAAACCACAAACCATAGAGGTATCTTATAAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAAATGTCCTTGGCTCAAACCACAAACCATAGAGGTATCTTATAAGG  502

seq1  AGCACAATTTATGTGATATCCAAGACAAAGAATGGAAAACCCACAGTCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACAATTTATGTGATATCCAAGACAAAGAATGGAAAACCCACAGTCAT  552

seq1  GATCAAGGACATTAAAGTTTGTAAACC-TGTGAATCCACTCAGACAGGAA  649
      |||||||||||| |||||||||||||| ||||||||||||||||||| ||
seq2  GATCAAGGACATGAAAGTTTGTAAACCATGTGAATCCACTCAGACAGAAA  602

seq1  CAAAATGAATCTTGGTCAAGAAAATAACACCAGATGCCTGAAGGAAATAA  699
      ||||||||||||||| ||||||||||| ||||||||||||||||||||||
seq2  CAAAATGAATCTTGGGCAAGAAAATAATACCAGATGCCTGAAGGAAATAA  652

seq1  GGACAATATAAAATATTAAAATTATGTTCAATAGGTGCTTAGAAATGCCA  749
      |||||||||||||||||||||||  ||||||||||||||||||||| |||
seq2  GGACAATATAAAATATTAAAATTGAGTTCAATAGGTGCTTAGAAATACCA  702

seq1  C-----ACAAAAAAAAATCCTGAAGAGAAAATGCAGTGAGGCAAATAAAA  794
      |     | ||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAAAAAAAAAAAATCCTGAAGAGAAAATGCAGTGAGGCAAATAAAA  752

seq1  ATGATACATAGAGAACCTGTGGGAGACAGATTATCAGACTTAAAGAAAAA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATACATAGAGAACCTGTGGGAGACAGATTATCAGACTTAAAGAAAAA  802

seq1  GTAGAGGAGGTGGATGCCTCAATCAAAGAAAATGGTGAATTAAAATGATG  894
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAGGA-GTGGATGCCTCAATCAAAGAAAATGGTGAATTAAAATGATG  851

seq1  TTAGGTCAAGGGACAATATTATTTACTGCTTGAAGGATGAGGCAATAAAG  944
      |||||||||||||| ||||||||||||||||||| ||||| |||||||||
seq2  TTAGGTCAAGGGAC-ATATTATTTACTGCTTGAA-GATGA-GCAATAAAG  898

seq1  AGAAACTCCTTTGGAAAACTGTCCTGATCTTTGTCAAAAAAA  986
      || ||||||||  | ||||||| |||||| ||||||||||||
seq2  AG-AACTCCTT--GGAAACTGT-CTGATC-TTGTCAAAAAAA  935