BAC Information

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BAC

Clone NameB6Ng01-047N10
Chromosome4 (Build37)
Map Location 6,046,547 - 6,047,581
singlet/doubletsinglet
Overlap genenone
Upstream gene1700012H17Rik, LOC669309
Downstream gene3110003A22Rik, Cyp7a1, Sdcbp, Nsmaf, LOC100039397, LOC100039414, Tox, LOC100039421, LOC666700
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-047N10.bB6Ng01-047N10.g
ACCDH872585DH872586
length1,1661,027
definitionDH872585|Mus musculus domesticus DNA, BAC clone: B6Ng01-047N10, 5' end.DH872586|Mus musculus domesticus DNA, BAC clone: B6Ng01-047N10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctaggaagcctttaatttccttctttatttcttctttgttcaggt
ggtagcctgcctgagcaccagttctctctggaaggcaacactgggggcag
cattgatgattattatcggtggctaaactatgttttgcaagtgctaaaat
gttgtttattttataatatttatccttctgggtttctgtcaattaatgcc
tgctattcaatagcagaggattaagtaaagaattaattactctggcttct
tgttcttttctcacaggtctctctgctgatcctgcaagaggctcagagtt
catcagctccttatgagaaaggaaaagaaagacatacacgcaaagaaacc
tcttttaaataggcaatatgcacaaacatacaaacacattttggttggac
ctgtttcattaactccaccagtgttcatgcatacttatatacatacattt
atacctacacatatgtgaatatacaaacagatatatacataaatacattt
ggtggattgtaagccattcaaaaaatagtgagttacttccaggaaatcac
atgttagccttagccttagtcattcagtatcaacatgttcagtttccatg
agtttgtaggctttctgttgattctattattatagaaatctaactttatt
ctgtgattgtctgataggatgcagggtattatttctattttcttgtatct
attgagacttgctttgtgaccaagtatgtgctcaattttggagaatgttc
tgtgatgtgctgagaaaggtatattcttttgtatttgggtgaaatgttct
atagataactgctaggtctatttgtttcacaatgtttatgaatttcataa
ttcctctgtttagtttttgtctgggtgacatgtccatggtgagagtgagg
tattgaagtctttcattatcatatatgagggttcaatatcatactgtggt
ctaagtcagagtgtagtgtagctctagcaggctggtcagatcgtcatcac
tgagcgagcactgctgtgctgctctcatcactctcttgatgtacactgct
gctacctgctgaggccgatcgatctcagatctcagttagctgcactgatt
gcattcgtagcatctgaacttcaatgtgactgcatggctcccttaagagc
gtctccgccattagat
accaactttggcagaaatccccttctggaccagatgccatccaggccatc
aaatctaacccctaacatggtcagagaccgtttattcaaccacaggccac
tccatctggaaaattcaagaaactaagagaggaaatggaaaccaaggaag
aaaacatgcatccaaaaaagacaaacccagaaatcagcatctagacctct
aatcactccaactcagtgtgcctaaatgtcactataaggacacaataaac
aagatccaggacactaacagagtcaagccataccactacagcaagccttg
aaaattccaacttagctgaagcacaagaaaatgatcttaaacgaacttta
agatgatgatagaggtctttaaagagctcatttataacttcctttaagga
attgaggataagacaatcaaaaattggaggaaataaatcccttaaagaaa
gacaagaaaagaacaaacagttgaagaaaataaataaaactgtttaagac
cccaaaaagtggaaatagaagcaataaagaaaatataaactgagggaatt
ttggagatgaaaaaatctaagtaagcaaacacaaactatagacacaagaa
tcactgatagaatacaagagatggaagagagaatctcagatgcagaaaat
atgatacaagaaataattatatatgggggggggggccttcctggggaaga
gggcacagagaggagcatcagaaggtctttgctgacagggcagctggtag
agaagatgagtaggttatggaagaaagtaagcaagcaagagagtcagggg
agtcttacagctgccttactagcaatcatgccactcctgtggctctatca
gcaatcgagccatttttcatgctctgactgactagcaccagatgcttctt
tatttacactagtttcccagacaacgacatgattatccaagtggtagaga
agatttgtttgacttttcattgcatgtccaggtacagtcagtctattaga
aataacaaacgattattcttatttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_6046547_6047581
seq2: B6Ng01-047N10.g_77_1103

seq1  ACCAACTTTGGCAGAAATCCCCTTCTGGACCAGATGCCATCCAGGCCATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAACTTTGGCAGAAATCCCCTTCTGGACCAGATGCCATCCAGGCCATC  50

seq1  AAATCTAACCCCTAACATGGTCAGAGACCGTTTATTCAACCACAGGCCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTAACCCCTAACATGGTCAGAGACCGTTTATTCAACCACAGGCCAC  100

seq1  TCCATCTGGAAAATTCAAGAAACTAAGAGAGGAAATGGAAACCAAGGAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCTGGAAAATTCAAGAAACTAAGAGAGGAAATGGAAACCAAGGAAG  150

seq1  AAAACATGCATCCAAAAAAGACAAACCCAGAAATCAGCATCTAGACCTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACATGCATCCAAAAAAGACAAACCCAGAAATCAGCATCTAGACCTCT  200

seq1  AATCACTCCAACTCAGTGTGCCTAAATGTCACTATAAGGACACAATAAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACTCCAACTCAGTGTGCCTAAATGTCACTATAAGGACACAATAAAC  250

seq1  AAGATCCAGGACACTAACAGAGTCAAGCCATACCACTACAGCAAGCCTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATCCAGGACACTAACAGAGTCAAGCCATACCACTACAGCAAGCCTTG  300

seq1  AAAATTCCAACTTAGCTGAAGCACAAGAAAATGATCTTAAACGAACTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTCCAACTTAGCTGAAGCACAAGAAAATGATCTTAAACGAACTTTA  350

seq1  AGATGATGATAGAGGTCTTTAAAGAGCTCATTTATAACTTCCTTTAAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGATGATAGAGGTCTTTAAAGAGCTCATTTATAACTTCCTTTAAGGA  400

seq1  ATTGAGGATAAGACAATCAAAAATTGGAGGAAATAAATCCCTTAAAGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAGGATAAGACAATCAAAAATTGGAGGAAATAAATCCCTTAAAGAAA  450

seq1  GACAAGAAAAGAACAAACAGTTGAAGAAAATAAATAAAACTGTTTAAGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAGAAAAGAACAAACAGTTGAAGAAAATAAATAAAACTGTTTAAGAC  500

seq1  CCCAAAAAGTGGAAATAGAAGCAATAAAGAAAATATAAACTGAGGGAATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAAAAGTGGAAATAGAAGCAATAAAGAAAATATAAACTGAGGGAATT  550

seq1  TTGGAGATGAAAAAATCTAAGTAAGCAAACACAAACTATAGACACAAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGATGAAAAAATCTAAGTAAGCAAACACAAACTATAGACACAAGAA  600

seq1  TCACTGATAGAATACAAGAGATGGAAGAGAGAATCTCAGATGCAGAAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGATAGAATACAAGAGATGGAAGAGAGAATCTCAGATGCAGAAAAT  650

seq1  ATGATACAAGAAATAATTATATAT-GGGGGGGGGGCCTTCCTGGGGAAGA  699
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  ATGATACAAGAAATAATTATATATGGGGGGGGGGGCCTTCCTGGGGAAGA  700

seq1  GGGCACAGAGAGGAGCATCAGAAGGTCTTTGCTGACAGGGCAGCTGGTAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCACAGAGAGGAGCATCAGAAGGTCTTTGCTGACAGGGCAGCTGGTAG  750

seq1  AGAAGATGAGTAGGTTATGGAAGAAAGTAAGCAAGCAAGAGAGTCAGGGG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGATGAGTAGGTTATGGAAGAAAGTAAGCAAGCAAGAGAGTCAGGGG  800

seq1  AGTCTTACAGCTGCCTTACTAGCAATCATGCCACTCCTGTGGCTCTATCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTACAGCTGCCTTACTAGCAATCATGCCACTCCTGTGGCTCTATCA  850

seq1  GCAATCGAGCCATTTTTCATGCTCTGACTGACTAGCACCAGATGCTTCTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATCGAGCCATTTTTCATGCTCTGACTGACTAGCACCAGATGCTTCTT  900

seq1  TATTTACACTAGTTTCCCAGAACAACGACATGATTATCCAAGTGGTAGAG  949
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TATTTACACTAGTTTCCCAG-ACAACGACATGATTATCCAAGTGGTAGAG  949

seq1  AAGATATGTTTGACTTTTCATTGCATGTCCAAGGTTACAAGTTCAGTCAT  999
      ||||| |||||||||||||||||||||||||  | ||||   ||||||  
seq2  AAGATTTGTTTGACTTTTCATTGCATGTCCA--GGTACA--GTCAGTC--  993

seq1  AATTAGAAAATACAAAACAGATTATTCTTATTTTTT  1035
       ||||||||  |||||   |||||||||||||||||
seq2  TATTAGAAATAACAAA--CGATTATTCTTATTTTTT  1027