BAC Information

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BAC

Clone NameB6Ng01-047P18
Chromosome4 (Build37)
Map Location 105,049,321 - 105,050,409
singlet/doubletsinglet
Overlap genenone
Upstream geneDab1, C8b, C8a, 1700024P16Rik, Prkaa2, LOC100039513, Ppap2b, LOC433742
Downstream geneLOC665518, LOC434381, Ppia-ps4_954.1, Map1lc3, LOC384039, Usp24
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-047P18.bB6Ng01-047P18.g
ACCDH872691DH872692
length1,0551,163
definitionDH872691|Mus musculus domesticus DNA, BAC clone: B6Ng01-047P18, 5' end.DH872692|Mus musculus domesticus DNA, BAC clone: B6Ng01-047P18, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaatatccccatctctctagctgacagcttagcaagctgactcca
atctgcaggaccccctggttgcctggctcaggcttccccaatgagaggcc
aaagctgctgtggacagacagacaggtctgcagaggctggtaaataagaa
ctccccagagcctctgccaagggtcgatctgaccagactgccactcacct
tgtcaggctgtgtgtgggattcgtcaagagccagcctgtctttccttcac
tctcgtcagtgtgccaggaaggatctgcctttaaacttgattgcgctgaa
ggcactagaggcctaccggttcatgactctgagacaacctgatcttccag
aagcctttgggttctgattcaggggagtgagaaaggttacttggtgccac
agtgggacaggggttcactggtttatagactcattctacaactatttatt
caggctgcggtttaactgtggagatgagttgaagagaggttctttgggca
tgagcctcgttgctccttcatcttgagatgggatccaggaattctgccgc
acaatttgttcatacccactgacggttgaatgagtccagtccttcacatg
caccactgggctgccccgtgagggtatttctacagattctaggagctatc
ctaaaaggaaccgaaccccagtgtgtatcaaatcccatatcagccgtccc
tagtgcatttcctctctccataccctttagttttatattgaatttaattt
gaaaacaaaccaccacaactggtaggacaaaggaagacacagccgtttat
ggaaacttctctgaataatgtaaaacgctctgctgtaagagaacagcatt
gttcctgagcctctgggcttgcagtgggttaggttcagggaaatggagca
tttggtgactgacctctcctcagttcagaaactctcagattcagcatcag
ctgctcgacgggccctgagactattctatgtgctctgctgactgagctcg
ggagccccagaagatggggtactggcactgttcgagcttagtctatggct
ccatc
gaattctttgagttcaaggccacagtgttattacagtttccaatgaaata
caaagacacattaaaaaagtaatttaaaattcatatttaaaaactggaaa
atctggaataaatgaataaatgcctacatatatatggcatacaaaatgaa
gtcaaaaaaggcacaaataacttaaatctatcctgatcatcaaaattgaa
gcagtaataagaaggatcctagaaaaagatgttaaggatcaaacatgctc
attgcatgattctaccaaacctttaaataggagctcaaccagtgctcctc
aaccagtttcgtaaaatatgggaaggaagactaacctcattctatgaggc
cagcattatcctgatgccaaccagataaagacaaatcaaagagagaaagc
tatagaccaagtcccttcatgaaatatagatgcaaaagttctcaaccaaa
ttcttgtaaataaaactcaagaactcatcagaagaccatactcttaagtt
attatttttccagaggtgcaggataatccattatagctagctcatgtggc
tcttaatagcttgagttgcccttagcagaaaggacaatactggaggaaca
acaatatatacaaccctaagttctagtagggagccatatagacaaaacca
gcttggtgctgtctcaaaaatagagatgcagactaatggaataggataga
ggacccagaaatacacccagttgcagtcacctaactgtccaacaaagatg
tttggagtgagttgtttgaatgagcaatgtcctccataggtttgtgtact
ttaacacttggtccccagttagcagcactgtttgggaaggttacagggag
gtgcagtcttgcttgagaagtatgtcactagggatgggtttgggagttga
gagcccttcttcaattagacacagtgtttgtagttagatgcatctccagg
tctgctcagctgtctactgtcatgcctgcccacgtgtagactattcctct
ggacatagctccaataaacctctttaagcgcttgctagatgttgacccac
taagagatagtatgtgcactctaagtgttattgagaagagacagacttag
gacgatgcttaaaaaatgttaagaatggaactaagcccgtcctcatctcc
caaaatcatacca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_105049321_105050409
seq2: B6Ng01-047P18.b_49_1103

seq1  GAATTCAATATCCCCATCTCTCTAGCTGACAGCTTAGCAAGCTGACTCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATATCCCCATCTCTCTAGCTGACAGCTTAGCAAGCTGACTCCA  50

seq1  ATCTGCAGGACCCCCTGGTTGCCTGGCTCAGGCTTCCCCAATGAGAGGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGCAGGACCCCCTGGTTGCCTGGCTCAGGCTTCCCCAATGAGAGGCC  100

seq1  AAAGCTGCTGTGGACAGACAGACAGGTCTGCAGAGGCTGGTAAATAAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTGCTGTGGACAGACAGACAGGTCTGCAGAGGCTGGTAAATAAGAA  150

seq1  CTCCCCAGAGCCTCTGCCAAGGGTCGATCTGACCAGACTGCCACTCACCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCAGAGCCTCTGCCAAGGGTCGATCTGACCAGACTGCCACTCACCT  200

seq1  TGTCAGGCTGTGTGTGGGATTCGTCAAGAGCCAGCCTGTCTTTCCTTCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGGCTGTGTGTGGGATTCGTCAAGAGCCAGCCTGTCTTTCCTTCAC  250

seq1  TCTCGTCAGTGTGCCAGGAAGGATCTGCCTTTAAACTTGATTGCGCTGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCGTCAGTGTGCCAGGAAGGATCTGCCTTTAAACTTGATTGCGCTGAA  300

seq1  GGCACTAGAGGCCTACCGGTTCATGACTCTGAGACAACCTGATCTTCCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACTAGAGGCCTACCGGTTCATGACTCTGAGACAACCTGATCTTCCAG  350

seq1  AAGCCTTTGGGTTCTGATTCAGGGGAGTGAGAAAGGTTACTTGGTGCCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTTTGGGTTCTGATTCAGGGGAGTGAGAAAGGTTACTTGGTGCCAC  400

seq1  AGTGGGACAGGGGTTCACTGGTTTATAGACTCATTCTACAACTATTTATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGACAGGGGTTCACTGGTTTATAGACTCATTCTACAACTATTTATT  450

seq1  CAGGCTGCGGTTTAACTGTGGAGATGAGTTGAAGAGAGGTTCTTTGGGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTGCGGTTTAACTGTGGAGATGAGTTGAAGAGAGGTTCTTTGGGCA  500

seq1  TGAGCCTCGTTGCTCCTTCATCTTGAGATGGGATCCAGGAATTCTGCCGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCCTCGTTGCTCCTTCATCTTGAGATGGGATCCAGGAATTCTGCCGC  550

seq1  ACAATTTGTTCATACCCACTGACGGTTGAATGAGTCCAGTCCTTCACATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTTGTTCATACCCACTGACGGTTGAATGAGTCCAGTCCTTCACATG  600

seq1  CACCACTGGGCTGCCCCGTGAGGGTATTTCTACAGATTCTAGGAGCTATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACTGGGCTGCCCCGTGAGGGTATTTCTACAGATTCTAGGAGCTATC  650

seq1  CTAAAAGGAACCGAACCCCAGTGTGTATCAAATCCCATATCAGCCGTCCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAAGGAACCGAACCCCAGTGTGTATCAAATCCCATATCAGCCGTCCC  700

seq1  TAGTGCATTTCCTCTCTCCATACCCTTTAGTTTTATATTGAATTTAATTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGCATTTCCTCTCTCCATACCCTTTAGTTTTATATTGAATTTAATTT  750

seq1  GAAAACAAACCACCACAACTGGTAGGACAAAGGAAGACACAGCCGTTTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACAAACCACCACAACTGGTAGGACAAAGGAAGACACAGCCGTTTAT  800

seq1  GGAAACTTCTCTGAATAATGTAAAACGCTCTGCTGTAAGAGAACAGCATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACTTCTCTGAATAATGTAAAACGCTCTGCTGTAAGAGAACAGCATT  850

seq1  GTTCCTGAGCCTCTGGGCTTGCAGTGGGTTAGGTTCAGGGGACAATGGAG  900
      ||||||||||||||||||||||||||||||||||||||||   |||||||
seq2  GTTCCTGAGCCTCTGGGCTTGCAGTGGGTTAGGTTCAGGG--AAATGGAG  898

seq1  CATTTGGTGACTGACCTCTCCTCCAAGTTCAGGAAACCTCTCAGATTTCA  950
      |||||||||||||||||||||||  |||||||  || |||||||| ||||
seq2  CATTTGGTGACTGACCTCTCCTC--AGTTCAG--AAACTCTCAGA-TTCA  943

seq1  GCCATCCAGGCTGCCCGGGAACCGGGGCCCTGAGAACTAATTCCTTATGT  1000
      | ||||   ||||| ||   ||  |||||||||| ||| ||||  |||||
seq2  G-CATC--AGCTGCTCG---AC--GGGCCCTGAG-ACT-ATTC--TATGT  981

seq1  GCTTCTGCTGGACTGAGGCTCGGGAGCCCCACAGAGAGATGGGGTTAACC  1050
      || |||||| |||||| |||||||||||||| |   |||||||||  || 
seq2  GC-TCTGCT-GACTGA-GCTCGGGAGCCCCAGA---AGATGGGGT--AC-  1022

seq1  TGGGCACTGTTTCGGAGCTTTAGTCTAATGGGCTCCATC  1089
        |||||||||   |||| ||||||||   |||||||||
seq2  -TGGCACTGTT--CGAGC-TTAGTCTA--TGGCTCCATC  1055