BAC Information

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BAC

Clone NameB6Ng01-048D21
Chromosome4 (Build37)
Map Location 147,847,129 - 147,992,031
singlet/doubletdoublet
Overlap geneFrap1, Angptl7, Exosc10, LOC100043151, Srm, Masp2, Tardbp
Upstream geneOTTMUSG00000010671, LOC545718, OTTMUSG00000010673, 2610305D13Rik, LOC666618, LOC100043100, LOC666640, LOC194189, LOC666652, LOC100041677, LOC277692, MGC67181, D4Wsu114e, Fv1, Mfn2, Plod1, 2510039O18Rik, Nppb, Nppa, Clcn6, Mthfr, LOC433806, Agtrap, 2610109H07Rik, Mad2l2, Fbxo6, Fbxo44, Fbxo2, Ptchd2, Ubiad1
Downstream geneGm572, LOC100041733, LOC100041742, LOC100041755, Casz1, Pex14, LOC670864, Dffa, Cort, Apitd1, LOC666774, Pgd, Kif1b, LOC100041794, Ube4b, Rbp7, LOC627985, Nmnat1, Lzic, Ctnnbip1, Clstn1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-048D21.bB6Ng01-048D21.g
ACCDH872859DH872860
length1,069990
definitionDH872859|Mus musculus domesticus DNA, BAC clone: B6Ng01-048D21, 5' end.DH872860|Mus musculus domesticus DNA, BAC clone: B6Ng01-048D21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(147,990,966 - 147,992,031)(147,847,129 - 147,848,126)
sequence
gaattctttgcatgttcagagtagaaaccattggttagaactacattctt
ttctccttattttaatttgaatcccaccctatgaattttttccttaggaa
aatctccatttgggagatcatgatgtcatggtgtttgattcttttggttt
tgtttttaacacttgtcttccttcatatacgaaagtacaatatgaagcct
tcatttaatctctgcagttcatctcatttcaaatgtttatggaagaagca
cttcattgaaagtagtgctgtaaatattctgccataggaatacttctgtc
tacatgctttctcatccaagaattcgtcatcacgctgcacaggctgcgtc
tttgacggtgggtgttccatttttatccgctactctttatttcatggagt
cgtatcaacgctatgaacgcaaggctgtgatatggaaccagaaggctgtt
tgaacttttgaaaccttgtgtgggattgatggtggtgccgaggcatgaaa
ggctagtatgagcgagaaaaggagagcgcgtgcagagacttggtggtgga
aaatggatattttttaacttggagagatgtgtcactcaatcctgtggctt
tggtgagagagtgtgcagagagcaatgatagcaaataacgtacgaatgtt
ttacatcaaaggacatccacatcagttggaagactttgagttttgttctt
aggaaacccactttagttgaatgtgttaagtgaaatacttgtactttccc
tccccctctgtcaactgctgtgaatgctgtatggtgtgtgttctcctctg
ttactgatctggaagtgtggggaacgtgaactgaagctgatgggctgcga
acatggactgagcttgtggtgtgctttgcaggagaacttggaagcagagt
tcaccagtgagctcagtgtctcaaagaagggtggaagttctcatgtcttg
ttagctattcataagaatgctgtttgctgcagttctgtgtcctgtggctg
gatgctttttttataagagttgtcattgttggaaattcttaataaaaact
gaattaaaatatatgtgtc
gaattcctccgtaatccttgtcaggtgctaagctggtggctgcatcgtga
ctatgtagttctgtgatataaagagtggttcgtggcgtctgtacccatgc
atgcatggtgtgtgtaccaacaacacacctcactctaggggttcaaggca
gcacacagtccttactagtcttagaatgaccctgagggtatacaggctgc
gctctgcttggaagactatgcttaaattcattatctttccctcagtgaca
tacttagaggtaggtagtaacattttataaactgcttcctgactttgtgg
ctgaagtatagaatggttttttgtttttgtttttgttttttaatcccttt
ttgggacaggatctctctgtgttgcccaggctggtctcaaattcctgggc
ttgagggaatcttcctagccacccaggtactgtgacttgagttctgtgcc
accatgcctggctttcagtccacttttgtgctttgttcttaacagttgtc
agcctcgttagattcttcactccattcgctacaaacactcccagactttg
attctagacaattacatgctctgaaaataaagggagcttggatgtttttc
tttgtaaactgtaaatcattcattactgctttgagtgcctctgggtctcc
actgcagtgctgcttcagcaggggaggctgcagacctttgctcagggctc
tcttcctgctgactttagctgctgtctccgttttaccgctagttagagcc
gctactgttggagggtttgggttaatgttttttacagttttaaacattcc
cttaacagtcttcaattattaaaagagttcttttctttttaatcatgagt
tgataattagatttaccaaatgcctttcctttgttttaataatcatccag
gattttttttctcctttatgtcttgtttcatgtgttgaatagttctatgt
cgaaacacagccactctggttatgacagtcgttttgttcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_147990966_147992031
seq2: B6Ng01-048D21.b_44_1112 (reverse)

seq1  GACACATATTATTTAAATCAGTTTTATTTAAGAATTTCCAACAATGACAA  50
      |||||||||  ||||| ||||||||  |||||||||||||||||||||||
seq2  GACACATATATTTTAATTCAGTTTTTATTAAGAATTTCCAACAATGACAA  50

seq1  CTCTTAT-AAAAAAGCATCCAAGCACAGGACACAGAACTGCAGCAAACAG  99
      ||||||| |||||||||||||  |||||||||||||||||||||||||||
seq2  CTCTTATAAAAAAAGCATCCAGCCACAGGACACAGAACTGCAGCAAACAG  100

seq1  CATTCTTATGAATAGCTAAC-AGACATGAGAACTTCCACCCTTCTTTGAG  148
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CATTCTTATGAATAGCTAACAAGACATGAGAACTTCCACCCTTCTTTGAG  150

seq1  ACACCTGAGCTCACTGGTGAACTCTGCTTCCAAGTTCTCCTGCAAAGCAC  198
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACA-CTGAGCTCACTGGTGAACTCTGCTTCCAAGTTCTCCTGCAAAGCAC  199

seq1  ACCACAAGCTCAGTCCATGTTCGCAGCCCATCAGCTTCAGTTCACGTT-C  247
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  ACCACAAGCTCAGTCCATGTTCGCAGCCCATCAGCTTCAGTTCACGTTCC  249

seq1  CCACACTTCCAGATCAGTAACAGAGGAGAACACACACCATACAGCATTCA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACTTCCAGATCAGTAACAGAGGAGAACACACACCATACAGCATTCA  299

seq1  CAGCAGTTGACAGAGGGGGAGGG-AAGTACAAGTATTTCACTTAACACAT  346
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  CAGCAGTTGACAGAGGGGGAGGGAAAGTACAAGTATTTCACTTAACACAT  349

seq1  TCAACTAAAGTGGGTTTCCTAAGAACAAAACTCAAAGTCTTCCAACTGAT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACTAAAGTGGGTTTCCTAAGAACAAAACTCAAAGTCTTCCAACTGAT  399

seq1  GTGGATGTCCTTTGATGTAAAACATTCGTACGTTATTTGCTATCATTGCT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGATGTCCTTTGATGTAAAACATTCGTACGTTATTTGCTATCATTGCT  449

seq1  CTCTGCACACTCTCTCACCAAAGCCACAGGATTGAGTGACACATCTCTCC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCACACTCTCTCACCAAAGCCACAGGATTGAGTGACACATCTCTCC  499

seq1  AAGTTAAAAAATATCCATTTTCCACCACCAAGTCTCTGCACGCGCTCTCC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTAAAAAATATCCATTTTCCACCACCAAGTCTCTGCACGCGCTCTCC  549

seq1  TTTTCTCGCTCATACTAGCCTTTCATGCCTCGGCACCACCATCAATCCCA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCGCTCATACTAGCCTTTCATGCCTCGGCACCACCATCAATCCCA  599

seq1  CACAAGGTTTCAAAAGTTCAAACAGCCTTCTGGTTCCATATCACAGCCTT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGGTTTCAAAAGTTCAAACAGCCTTCTGGTTCCATATCACAGCCTT  649

seq1  GCGTTCATAGCGTTGATACGACTCCATGAAATAAAGAGTAGCGGATAAAA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTTCATAGCGTTGATACGACTCCATGAAATAAAGAGTAGCGGATAAAA  699

seq1  ATGGAACACCCACCGTCAAAGACGCAGCCTGTGCAGCGTGATGACGAATT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAACACCCACCGTCAAAGACGCAGCCTGTGCAGCGTGATGACGAATT  749

seq1  CTTGGATGAGAAAGCATGTAGACAGAAGTATTCCTATGGCAGAATATTTA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGATGAGAAAGCATGTAGACAGAAGTATTCCTATGGCAGAATATTTA  799

seq1  CAGCACTACTTTCAATGAAGTGCTTCTTCCATAAACATTTGAAATGAGAT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCACTACTTTCAATGAAGTGCTTCTTCCATAAACATTTGAAATGAGAT  849

seq1  GAACTGCAGAGATTAAATGAAGGCTTCATATTGTACTTTCGTATATGAAG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGCAGAGATTAAATGAAGGCTTCATATTGTACTTTCGTATATGAAG  899

seq1  GAAGACAAGTGTTAAAAACAAAACCAAAAGAATCAAACACCATGACATCA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGACAAGTGTTAAAAACAAAACCAAAAGAATCAAACACCATGACATCA  949

seq1  TGATCTCCCAAATGGAGATTTTCCTAAGGAAAAAATTCATAGGGTGGGAT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCTCCCAAATGGAGATTTTCCTAAGGAAAAAATTCATAGGGTGGGAT  999

seq1  TCAAATTAAAATAAGGAGAAAAGAATGTAGTTCTAACCAATGGTTTCTAC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATTAAAATAAGGAGAAAAGAATGTAGTTCTAACCAATGGTTTCTAC  1049

seq1  TCTGAACATGCAAAGAATTC  1066
      ||||||||||||||||||||
seq2  TCTGAACATGCAAAGAATTC  1069

seq1: chr4_147847129_147848126
seq2: B6Ng01-048D21.g_68_1057

seq1  GAATTCCTCCGTAATCCTTGTCAGGTGCTAAGCTGGTGGCTGCATCGTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCCGTAATCCTTGTCAGGTGCTAAGCTGGTGGCTGCATCGTGA  50

seq1  CTATGTAGTTCTGTGATATAAAGAGTGGTTCGTGGCGTCTGTACCCATGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGTAGTTCTGTGATATAAAGAGTGGTTCGTGGCGTCTGTACCCATGC  100

seq1  ATGCATGGTGTGTGTACCAACAACACACCTCACTCTAGGGGTTCAAGGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATGGTGTGTGTACCAACAACACACCTCACTCTAGGGGTTCAAGGCA  150

seq1  GCACACAGTCCTTACTAGTCTTAGAATGACCCTGAGGGTATACAGGCTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACACAGTCCTTACTAGTCTTAGAATGACCCTGAGGGTATACAGGCTGC  200

seq1  GCTCTGCTTGGAAGACTATGCTTAAATTCATTATCTTTCCCTCAGTGACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGCTTGGAAGACTATGCTTAAATTCATTATCTTTCCCTCAGTGACA  250

seq1  TACTTAGAGGTAGGTAGTAACATTTTATAAACTGCTTCCTGACTTTGTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTAGAGGTAGGTAGTAACATTTTATAAACTGCTTCCTGACTTTGTGG  300

seq1  CTGAAGTATAGAATGGTTTTTTGTTTTTGTTTTTGTTTTTTAATCCCTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGTATAGAATGGTTTTTTGTTTTTGTTTTTGTTTTTTAATCCCTTT  350

seq1  TTGGGACAGGATCTCTCTGTGTTGCCCAGGCTGGTCTCAAATTCCTGGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGACAGGATCTCTCTGTGTTGCCCAGGCTGGTCTCAAATTCCTGGGC  400

seq1  TTGAGGGAATCTTCCTAGCCACCCAGGTACTGTGACTTGAGTTCTGTGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGGAATCTTCCTAGCCACCCAGGTACTGTGACTTGAGTTCTGTGCC  450

seq1  ACCATGCCTGGCTTTCAGTCCACTTTTGTGCTTTGTTCTTAACAGTTGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGCCTGGCTTTCAGTCCACTTTTGTGCTTTGTTCTTAACAGTTGTC  500

seq1  AGCCTCGTTAGATTCTTCACTCCATTCGCTACAAACACTCCCAGACTTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTCGTTAGATTCTTCACTCCATTCGCTACAAACACTCCCAGACTTTG  550

seq1  ATTCTAGACAATTACATGCTCTGAAAATAAAGGGAGCTTGGATGTTTTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTAGACAATTACATGCTCTGAAAATAAAGGGAGCTTGGATGTTTTTC  600

seq1  TTTGTAAACTGTAAATCATTCATTACTGCTTTGAGTGCCTCTGGGTCTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAAACTGTAAATCATTCATTACTGCTTTGAGTGCCTCTGGGTCTCC  650

seq1  ACTGCAGTGCTGCTTCAGCAGGGGAGGCTGCAGACCTTTGCTCAGGGCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCAGTGCTGCTTCAGCAGGGGAGGCTGCAGACCTTTGCTCAGGGCTC  700

seq1  TCTTCCTGCTGACTTTAGCTGCTGTCTCCGTTTTACCGCTAGTTAGAGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCTGCTGACTTTAGCTGCTGTCTCCGTTTTACCGCTAGTTAGAGCC  750

seq1  GCTACTGTTGGAGGGTTTGGGTTAATGTTTTTTACAGTTTTTAAACATTC  800
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GCTACTGTTGGAGGGTTTGGGTTAATGTTTTTTACAG-TTTTAAACATTC  799

seq1  CCTT-ACAGTCTTCAATTATTAAAAGAGTTCTTTTCTTTTTAATCATGAG  849
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAACAGTCTTCAATTATTAAAAGAGTTCTTTTCTTTTTAATCATGAG  849

seq1  TTGAT-ACTAGATTTACCAAATGCCTTTCCTTTGTTTTAATAATCATCCA  898
      ||||| | ||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATAATTAGATTTACCAAATGCCTTTCCTTTGTTTTAATAATCATCCA  899

seq1  GGATTTTTTTTTCTCCTTTAATGTCTTGTTTCATTGTGTTGAAATAAGTT  948
      ||| ||||||||||||||| ||||||||||||| |||||||||   ||||
seq2  GGA-TTTTTTTTCTCCTTT-ATGTCTTGTTTCA-TGTGTTGAA--TAGTT  944

seq1  CTAATGTCGAAACACAGCCACTCTGGTTATGACAGGTTGTTTTTTGTTTG  998
      || ||||||||||||||||||||||||||||||| || |  ||||||| |
seq2  CT-ATGTCGAAACACAGCCACTCTGGTTATGACA-GTCG--TTTTGTTCG  990