BAC Information

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BAC

Clone NameB6Ng01-048F14
Chromosome4 (Build37)
Map Location 6,490,243 - 6,624,189
singlet/doubletdoublet
Overlap geneTox
Upstream gene1700012H17Rik, LOC669309, 3110003A22Rik, Cyp7a1, Sdcbp, Nsmaf, LOC100039397, LOC100039414
Downstream geneLOC100039421, LOC666700
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-048F14.bB6Ng01-048F14.g
ACCDH872935DH872936
length169979
definitionDH872935|Mus musculus domesticus DNA, BAC clone: B6Ng01-048F14, 5' end.DH872936|Mus musculus domesticus DNA, BAC clone: B6Ng01-048F14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(6,624,021 - 6,624,189)(6,490,243 - 6,491,224)
sequence
gaattccaaatttagtagagttctagaaacagtaagaaccaaacagtaac
cactgcctcattaaaaaatgtatacaaagagcctggaatgagtatctttc
caacatgtaacagaccctgggtataatccctggcagtgcaaatgcaagtg
tgttggtggaggtgggggg

gaattctcagcccctgctcctgctccagccccgtgtctgcccccatgcca
tcttctctgtgagaacaatgaattaaacccctgaaacgtaagccagccct
gatgagatgttttcctttataagtgtggctgtggtcatgctgatttttcg
cggaaataaaaccctaactaagccaccttgtctggaaaaataaaatgaag
caaaataaaataaaatatgatgtaaaaataaaatcggcaatatatgtgat
tttaaattccactgctgtaacttttatgccagtgctccactgtgcttcgt
actgccttcctcccttgtgaaggttcccggactctgcccacctatttcag
atggtagttactttcctcaagaatgggggaaaaataaaagtctttaagct
gtgctgaaccatcttaagcaatttcagttgtctgtccgtttttaaatcct
acccataagaaacaaaaagaaatattgtgcttatgagaatttaaaaaata
attagatatagacaaaaactctctcacataaaacgtggttctttttctag
gcttatcctggtgtttcttgaacagacatcagtgaatgctgaaatcaata
tgaaatctaaccttaactcatccaggaagtggtctgtgagctacatttgt
atttcatgtaaattttataaaatagagtaataagaaatcatcacagtgtg
tatttcttaaaattcaacaaaatgcaattgaaaagctatgaatcgaagag
tttccatctttaatggtactctcgtgatgcagaaacatccttgcagacaa
aatgaaacattgcctttgtaaaatacgtcttctacacatctaaaataaaa
accaatttttattaggctagacatagaagagttgctagaccttgtatttc
tttttgaccaagtctaagaggaaatattttcatgttgactctaagaattt
tctctcacatcttgtttgtttgttgtttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_6624021_6624189
seq2: B6Ng01-048F14.b_42_210 (reverse)

seq1  CCCCCCACCTCCACCAACACACTTGCATTTGCACTGCCAGGGATTATACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCACCTCCACCAACACACTTGCATTTGCACTGCCAGGGATTATACC  50

seq1  CAGGGTCTGTTACATGTTGGAAAGATACTCATTCCAGGCTCTTTGTATAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGTCTGTTACATGTTGGAAAGATACTCATTCCAGGCTCTTTGTATAC  100

seq1  ATTTTTTAATGAGGCAGTGGTTACTGTTTGGTTCTTACTGTTTCTAGAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTAATGAGGCAGTGGTTACTGTTTGGTTCTTACTGTTTCTAGAAC  150

seq1  TCTACTAAATTTGGAATTC  169
      |||||||||||||||||||
seq2  TCTACTAAATTTGGAATTC  169


seq1: chr4_6490243_6491224
seq2: B6Ng01-048F14.g_69_1047

seq1  GAATTCTCAGCCCCTGCTCCTGCTCCAGCCCCGTGTCTGCCCCCATGCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGCCCCTGCTCCTGCTCCAGCCCCGTGTCTGCCCCCATGCCA  50

seq1  TCTTCTCTGTGAGAACAATGAATTAAACCCCTGAAACGTAAGCCAGCCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTCTGTGAGAACAATGAATTAAACCCCTGAAACGTAAGCCAGCCCT  100

seq1  GATGAGATGTTTTCCTTTATAAGTGTGGCTGTGGTCATGCTGATTTTTCG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAGATGTTTTCCTTTATAAGTGTGGCTGTGGTCATGCTGATTTTTCG  150

seq1  CGGAAATAAAACCCTAACTAAGCCACCTTGTCTGGAAAAATAAAATGAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAAATAAAACCCTAACTAAGCCACCTTGTCTGGAAAAATAAAATGAAG  200

seq1  CAAAATAAAATAAAATATGATGTAAAAATAAAATCGGCAATATATGTGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATAAAATAAAATATGATGTAAAAATAAAATCGGCAATATATGTGAT  250

seq1  TTTAAATTCCACTGCTGTAACTTTTATGCCAGTGCTCCACTGTGCTTCGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATTCCACTGCTGTAACTTTTATGCCAGTGCTCCACTGTGCTTCGT  300

seq1  ACTGCCTTCCTCCCTTGTGAAGGTTCCCGGACTCTGCCCACCTATTTCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCCTTCCTCCCTTGTGAAGGTTCCCGGACTCTGCCCACCTATTTCAG  350

seq1  ATGGTAGTTACTTTCCTCAAGAATGGGGGAAAAATAAAAGTCTTTAAGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTAGTTACTTTCCTCAAGAATGGGGGAAAAATAAAAGTCTTTAAGCT  400

seq1  GTGCTGAACCATCTTAAGCAATTTCAGTTGTCTGTCCGTTTTTAAATCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGAACCATCTTAAGCAATTTCAGTTGTCTGTCCGTTTTTAAATCCT  450

seq1  ACCCATAAGAAACAAAAAGAAATATTGTGCTTATGAGAATTTAAAAAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCATAAGAAACAAAAAGAAATATTGTGCTTATGAGAATTTAAAAAATA  500

seq1  ATTAGATATAGACAAAAACTCTCTCACATAAAACGTGGTTCTTTTTCTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGATATAGACAAAAACTCTCTCACATAAAACGTGGTTCTTTTTCTAG  550

seq1  GCTTATCCTGGTGTTTCTTGAACAGACATCAGTGAATGCTGAAATCAATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTATCCTGGTGTTTCTTGAACAGACATCAGTGAATGCTGAAATCAATA  600

seq1  TGAAATCTAACCTTAACTCATCCAGGAAGTGGTCTGTGAGCTACATTTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATCTAACCTTAACTCATCCAGGAAGTGGTCTGTGAGCTACATTTGT  650

seq1  ATTTCATGTAAATTTTATAAAATAGAGTAATAAGAAATCATCACAGTGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCATGTAAATTTTATAAAATAGAGTAATAAGAAATCATCACAGTGTG  700

seq1  TATTTCTTAAAATTCAACAAAATGCAATTGAAAAGCTATGAATCGAAGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTTAAAATTCAACAAAATGCAATTGAAAAGCTATGAATCGAAGAG  750

seq1  TTTCCATCTTTAATGGTACTCTCGTGATGCAGAAACATCCTTGCAGACAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCATCTTTAATGGTACTCTCGTGATGCAGAAACATCCTTGCAGACAA  800

seq1  AATGAAACATTGCCTTTGTAATATACGTCTTCTACACATCTAAAATAAAA  850
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  AATGAAACATTGCCTTTGTAAAATACGTCTTCTACACATCTAAAATAAAA  850

seq1  ACCAA-TTTTATTAGGCTAGAACATAGAAGAGTTGCTAAGACCTTGTATT  899
      ||||| |||||||||||||| |||||||||||||||| ||||||||||||
seq2  ACCAATTTTTATTAGGCTAG-ACATAGAAGAGTTGCT-AGACCTTGTATT  898

seq1  TCTTTTTGACCAAGTCTAAAGAGGAAAATATTTTCATGTTTGACTCTAAA  949
      ||||||||||||||||| |||||| ||||||||||||| |||||||| ||
seq2  TCTTTTTGACCAAGTCT-AAGAGG-AAATATTTTCATG-TTGACTCT-AA  944

seq1  GATATTTTCTCTCCACATCT--TTTGTT--TTGTTTT  982
      || ||||||||| |||||||  ||||||  |||||||
seq2  GA-ATTTTCTCT-CACATCTTGTTTGTTTGTTGTTTT  979


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