BAC Information

Click to search

BAC

Clone NameB6Ng01-049E15
Chromosome4 (Build37)
Map Location 82,839,388 - 82,840,544
singlet/doubletsinglet
Overlap geneLOC667985
Upstream geneNfib, Zdhhc21, Cer1, Frem1
Downstream gene1810054D07Rik, Snapc3, Psip1, LOC100040611, 4930473A06Rik, LOC668010
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-049E15.bB6Ng01-049E15.g
ACCDH873596DH873597
length1,1191,083
definitionDH873596|Mus musculus domesticus DNA, BAC clone: B6Ng01-049E15, 5' end.DH873597|Mus musculus domesticus DNA, BAC clone: B6Ng01-049E15, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttttaattcctatgagtgcctgcatttaaaaaaattagagtgt
ttgaaactcaataacaataatgtaccttggggccttggaaaaacaagaat
cagccaaaccccaagtcactagtcagaaacaaataaaggtaaaaattaat
gaaatgaaagtaaaaataaatatgaaaaaaaaacaatgaaacaaagagtt
gattctttgaaaatctaaacaagatcgggaaactaatatttgtctaacca
aagttagacaagactgaaattaacaagattatagctgaaaagtgagacaa
gaccactgattttagtggaatttaggaaaatcattaaatataccactaga
gcttatattccaccaaattggaaaatctaaaagaaatgggtatatttcta
gatgtttatggccagtcaaaactgaacaaagagctctctgctcctccctg
ttccagagacagccgcatcttcttgtgcagtgtcagcctcgttctgtaga
caaaatggtgaaggtctgtgtgaacggatttggccatattgggcacctgg
tcaccagggctgccttctgctctccacatggcaaagtagaggttgttgcc
atcaacgtccccttcattgacctcaactacatggtctacatgttccagta
tgactccacccacggcaaattcaatggcacagtcaaggccaagaatggga
agcttgtcatcaatgggaagcccatcaccatcttccaggagcaagaccca
ctaacatcaaatggggtgaggccggtgctgagtatgtcgtggaatctact
ggtgtcttcaccgccatggagaaggctgctgcccattttagggtggagcc
aaaagggtcatcatctccacccttctgccgatgccctcatgtttgtgatg
gtgtgaccacgagaaatatgacaactcactcagatgtcagcatgcatcct
gcaccaccaaatgcttagcacccctgccagtcatccatgacactttggca
tcttgagggctcatgaccacggtcatgcatcactgccactcgagactgtg
ggtggcctctgaagcttggccgtagtggccgtggggctgccaagaacatc
atcctgcattcctgtgggc
gaattcttgctggctgaggtatgaaaagcagcctgataatttcacaagga
atgtatgctatgctacttagttttgtttcagacaaagagaagtcgggaaa
acatcatggagaatgagagctgaagggccatcagaagaggggaaaaaact
tctctcctttgcctgagagctacaatgtgagcttaaaatactccatggtt
cgcagaaatggattctggaattattaaggatggcaatgtcacagcatatt
attggttagctcttagtcattgtaactcttaggaaaacaaatctgaagaa
tatatcttgggtagcccatgtcctggcaatagataagctttctattgttt
atgaagaaaaagagaatgatatagggacaaaaactccattctctcccacc
tgtctctaagttttattatccattgagttgaactcaaaaatatatctacc
acacagggtaagtcacataagtgaaatgctcaacactttggtaattatag
ttatgatggttagtggtaactgtcaacagaaattagttaggatcattcag
aagatgagcctttaggcatgtcagtaggacactacctttttctcagttga
gatgggaagttctgcccactgtgggaggcaccattccctaggaaggagat
cctggagtgcataaaagtagaggaagtgaaccaagcaagatgctgggcag
tggtggctcacgcctttaatcccagcacttgggaggcagagacaggtgga
tttctgagttcaaggccagtcttggtctacagagtgagttccaggacagc
caaggctaaacagagaaaccctgcctcaaccccacccccaccccctaaaa
aagatttcgtgctttctttgcccttgccttctgactgtgtaggtagtgtg
accagctgtttcagcttccagtgctttgacttcccctctagatggcctta
gactgtgagctaaataacccttctgttttagttgcttttgcagaaagttt
attgagctaagaaagattagcatagttatgagcaagtctgagaaatactg
gtaggtagtcatgcataccatctcggtgcctca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_82839388_82840544
seq2: B6Ng01-049E15.b_47_1165

seq1  GAATTCTTTTTAATTCCTATGAGTGCCTGCATTTAAAAAAATTAGAGTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTTAATTCCTATGAGTGCCTGCATTTAAAAAAATTAGAGTGT  50

seq1  TTGAAACTCAATAACAATAATGTACCTTGGGGCCTTGGAAAAACAAGAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAACTCAATAACAATAATGTACCTTGGGGCCTTGGAAAAACAAGAAT  100

seq1  CAGCCAAACCCCAAGTCACTAGTCAGAAACAAATAAAGGTAAAAATTAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCAAACCCCAAGTCACTAGTCAGAAACAAATAAAGGTAAAAATTAAT  150

seq1  GAAATGAAAGTAAAAATAAATATGAAAAAAAAACAATGAAACAAAGAGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGAAAGTAAAAATAAATATGAAAAAAAAACAATGAAACAAAGAGTT  200

seq1  GATTCTTTGAAAATCTAAACAAGATCGGGAAACTAATATTTGTCTAACCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTTTGAAAATCTAAACAAGATCGGGAAACTAATATTTGTCTAACCA  250

seq1  AAGTTAGACAAGACTGAAATTAACAAGATTATAGCTGAAAAGTGAGACAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTAGACAAGACTGAAATTAACAAGATTATAGCTGAAAAGTGAGACAA  300

seq1  GACCACTGATTTTAGTGGAATTTAGGAAAATCATTAAATATACCACTAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCACTGATTTTAGTGGAATTTAGGAAAATCATTAAATATACCACTAGA  350

seq1  GCTTATATTCCACCAAATTGGAAAATCTAAAAGAAATGGGTATATTTCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTATATTCCACCAAATTGGAAAATCTAAAAGAAATGGGTATATTTCTA  400

seq1  GATGTTTATGGCCAGTCAAAACTGAACAAAGAGCTCTCTGCTCCTCCCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTTTATGGCCAGTCAAAACTGAACAAAGAGCTCTCTGCTCCTCCCTG  450

seq1  TTCCAGAGACAGCCGCATCTTCTTGTGCAGTGTCAGCCTCGTTCTGTAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGAGACAGCCGCATCTTCTTGTGCAGTGTCAGCCTCGTTCTGTAGA  500

seq1  CAAAATGGTGAAGGTCTGTGTGAACGGATTTGGCCATATTGGGCACCTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATGGTGAAGGTCTGTGTGAACGGATTTGGCCATATTGGGCACCTGG  550

seq1  TCACCAGGGCTGCCTTCTGCTCTCCACATGGCAAAGTAGAGGTTGTTGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCAGGGCTGCCTTCTGCTCTCCACATGGCAAAGTAGAGGTTGTTGCC  600

seq1  ATCAACGTCCCCTTCATTGACCTCAACTACATGGTCTACATGTTCCAGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAACGTCCCCTTCATTGACCTCAACTACATGGTCTACATGTTCCAGTA  650

seq1  TGACTCCACCCACGGCAAATTCAATGGCACAGTCAAGGCCAAGAATGGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCCACCCACGGCAAATTCAATGGCACAGTCAAGGCCAAGAATGGGA  700

seq1  AGCTTGTCATCAATGGGAAGCCCATCACCATCTTCCAGGAGCAAGACCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGTCATCAATGGGAAGCCCATCACCATCTTCCAGGAGCAAGACCCA  750

seq1  CTAACATCAAATGGGGTGAGGCCGGTGCTGAGTATGTCGTGGAATCTACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACATCAAATGGGGTGAGGCCGGTGCTGAGTATGTCGTGGAATCTACT  800

seq1  GGTGTCTTCACCGCCATGGAGAAGGCTGCTGCCCACTTTAAGGGTGGAGC  850
      ||||||||||||||||||||||||||||||||||| ||| ||||||||||
seq2  GGTGTCTTCACCGCCATGGAGAAGGCTGCTGCCCA-TTTTAGGGTGGAGC  849

seq1  CAAAAGGGTCATCATCTCCACCCCTTCTGCCGATGCCCTCATGTTTGTGA  900
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CAAAAGGGTCATCATCTCCA-CCCTTCTGCCGATGCCCTCATGTTTGTGA  898

seq1  TGGGTGTGAACCACGAGAAATATGACAACTCACTCAAGATTGTCAGCAAT  950
      | |||||| |||||||||||||||||||||||||| ||| ||||||| ||
seq2  T-GGTGTG-ACCACGAGAAATATGACAACTCACTC-AGA-TGTCAGC-AT  943

seq1  GCATCCTGCACCACCAAATGCTTAGCACCCCTGGCCAAGGTCATCCATGA  1000
      |||||||||||||||||||||||||||||||| ||||  |||||||||||
seq2  GCATCCTGCACCACCAAATGCTTAGCACCCCT-GCCA--GTCATCCATGA  990

seq1  CAACTTTGGCATCGTGGAAGGGCTCATGACCACGGTCCATGCCATCACTG  1050
      | ||||||||||| ||  |||||||||||||||||| |||| ||||||||
seq2  C-ACTTTGGCATCTTG--AGGGCTCATGACCACGGT-CATG-CATCACTG  1035

seq1  CCACTCAGAAGACTGTGGGTGGCCCCTCTGGAAAGCTGTGGCGTGATGGC  1100
      ||||||   |||||||||||||  ||||||  |||||  | |||  ||||
seq2  CCACTC--GAGACTGTGGGTGG--CCTCTG--AAGCTTGGCCGTAGTGGC  1079

seq1  CGTGGGGCTGCCCAGAACATCATCCCTGCATTCACTGGTGCTGCCAAGGC  1150
      |||||||||||| |||||||||| |||||||||                |
seq2  CGTGGGGCTGCCAAGAACATCAT-CCTGCATTC----------------C  1112

seq1  TGTGGGC  1157
      |||||||
seq2  TGTGGGC  1119