BAC Information

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BAC

Clone NameB6Ng01-049F18
Chromosome4 (Build37)
Map Location 73,652,773 - 73,653,781
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667713, LOC100039698, OTTMUSG00000001246, LOC100039726, LOC667722, LOC623115, OTTMUSG00000000281, OTTMUSG00000000280, OTTMUSG00000000282, OTTMUSG00000000283, Gm428, Rasef, LOC667768, LOC545637, LOC623272, OTTMUSG00000014862, OTTMUSG00000004010, 2310002L09Rik
Downstream geneFrmd3, LOC100039774, Jmjd2c, LOC100040258, LOC100039814
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-049F18.bB6Ng01-049F18.g
ACCDH873646DH873647
length1,108996
definitionDH873646|Mus musculus domesticus DNA, BAC clone: B6Ng01-049F18, 5' end.DH873647|Mus musculus domesticus DNA, BAC clone: B6Ng01-049F18, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ctttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctactctataagtttcagtgtcgctggttttatgtgaagttctttga
tccatttagatttgaccttagtacaaggagataagtatggattgattcgc
attcttctacatgataacaaccagttgtgccaacaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttaccacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgtgttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccaatt
tacaatgttgatcctaccaatccatgagcatggggagatctttccatctt
ctgagatcttctttaatttctttcttcagagacttgagtttttatcatac
agatctttcactttcttagttagagtcacgcgagattttttatattattg
tgactattgaaaggtgttgtttccttatttcttcttcagcctgtatattt
ctttgtgtgagaaagccattgacttgtttggttaattttatcccgctctc
accgaagactggttatcaggttagaattcctaggggatttttgggtgctt
aatataac
gaattctctggtctagaggaggaaaaagacatgaaagcagagatttctgt
tctgatagttaggaaaaaaacaataacttcaacaggtgtgttttatacca
catagtagagtaatcataaatttcattgagagtgtctatagcgttaacat
ttgcaataggttctaagttgcattgtcttttaatgagtacaaattgttac
cagtgcttgggagaaggagatggataactgctagaagtgaaaatctgagg
agctgatgagaaaaactagctgaggatgcctttaagatgtttttcaaaac
tatttgtagaaaggagaccagtaactaattaaagatcagaaaatggcgat
gatgtgctattgggaaatcatcaaaagattgataatgccaaactgcttac
cttggaatgttgaaacctgacaacaatagcctggcatccaatgaccccag
tctgtgacctaaaatgccctatttagcataagcctaattttgatagctct
tgtttacatgtcacagatggtatacctggaaattttgtacatagtagctt
acaacaaactatgccaagtgtatacagaccaatatagaccatacactttt
gcatggcttgaattacaaacaggagaatgtagagtcacaccctgaccact
agaggacttgttttacacagagactctagcccactgtctcagagtgtaga
caatgaatattcaagacactatctaaattgtagataatttgaatgacctt
tcttctagtgaaaaatgagagttcactttgctctggctatgatggatcta
gaatagtgggaataggaggtgtgtataagctgagaaatagcaaggttcta
ttgagaactcaaatctatactaaatttatctgtacactatagatgtccag
ctatgtgctctgtatttactgtatctgatctcttcctcaggtgactctga
tgatcttgctatttcaggcaatacagatgtaataaagtggaaattg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_73652773_73653781
seq2: B6Ng01-049F18.g_67_1062 (reverse)

seq1  CAATTTCCAACTTTTATTACATCTGTTATTGCCTAGAAATAGCAAAGATC  50
      |||||||||   ||||||||||||| |||||||| |||||||| ||||||
seq2  CAATTTCCA--CTTTATTACATCTG-TATTGCCT-GAAATAGC-AAGATC  45

seq1  ATTCAGAGTCACCTGGAGGAAGAAGATCAGATACAGTAAATAACAGAAGC  100
      | |||||||||||| ||||||| |||||||||||||||||| |||| |||
seq2  A-TCAGAGTCACCT-GAGGAAG-AGATCAGATACAGTAAAT-ACAG-AGC  90

seq1  ACATAGCTGGACAATCTATAGTGTACAGATTAAATTTAGTATAGATTATG  150
      |||||||||||| |||||||||||||||| ||||||||||||||||| ||
seq2  ACATAGCTGGAC-ATCTATAGTGTACAGA-TAAATTTAGTATAGATT-TG  137

seq1  AGTTCTCAATAGAACC-TGCTATTTCTCAGCTTATACACACCTCCTATTC  199
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AGTTCTCAATAGAACCTTGCTATTTCTCAGCTTATACACACCTCCTATTC  187

seq1  CCACTTATTCTAGATCCATCATAGCCAGAGCAAAGTGAACTCTCATTTTT  249
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAC-TATTCTAGATCCATCATAGCCAGAGCAAAGTGAACTCTCATTTTT  236

seq1  CACTAGAAGAAAGGTCATTCAAATTATCTACAATTTAGATAGTGTCTTGA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAGAAGAAAGGTCATTCAAATTATCTACAATTTAGATAGTGTCTTGA  286

seq1  ATATTCATTGTCTACACTCTGAGACAGTGGGCTAGAGTCTCTGTGTAAAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCATTGTCTACACTCTGAGACAGTGGGCTAGAGTCTCTGTGTAAAA  336

seq1  CAAGTCCTCTAGTGGTCAGGGTGTGACTCTACATTCTCCTGTTTGTAATT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTCCTCTAGTGGTCAGGGTGTGACTCTACATTCTCCTGTTTGTAATT  386

seq1  CAAGCCATGCAAAAGTGTATGGTCTATATTGGTCTGTATACACTTGGCAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCATGCAAAAGTGTATGGTCTATATTGGTCTGTATACACTTGGCAT  436

seq1  AGTTTGTTGTAAGCTACTATGTACAAAATTTCCAGGTATACCATCTGTGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGTTGTAAGCTACTATGTACAAAATTTCCAGGTATACCATCTGTGA  486

seq1  CATGTAAACAAGAGCTATCAAAATTAGGCTTATGCTAAATAGGGCATTTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTAAACAAGAGCTATCAAAATTAGGCTTATGCTAAATAGGGCATTTT  536

seq1  AGGTCACAGAATGGGGTCATTGGATGCCAGGCTATTGTTGTCAGGTTTCA  599
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  AGGTCACAGACTGGGGTCATTGGATGCCAGGCTATTGTTGTCAGGTTTCA  586

seq1  ACATTCCAAGGTAAGCAGTTTGGCATTATCAATCTTTTGATGATTTCCCA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCCAAGGTAAGCAGTTTGGCATTATCAATCTTTTGATGATTTCCCA  636

seq1  ATAGCACATCATCGCCATTTTCTGATCTTTAATTAGTTACTGGTCTCCTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCACATCATCGCCATTTTCTGATCTTTAATTAGTTACTGGTCTCCTT  686

seq1  TCTACAAATAGTTTTGAAAAACATCTTAAAGGCATCCTCAGCTAGTTTTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACAAATAGTTTTGAAAAACATCTTAAAGGCATCCTCAGCTAGTTTTT  736

seq1  CTCATCAGCTCCTCAGATTTTCACTTCTAGCAGTTATCCATCTCCTTCTC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATCAGCTCCTCAGATTTTCACTTCTAGCAGTTATCCATCTCCTTCTC  786

seq1  CCAAGCACTGGTAACAATTTGTACTCATTAAAAGACAATGCAACTTAGAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGCACTGGTAACAATTTGTACTCATTAAAAGACAATGCAACTTAGAA  836

seq1  CCTATTGCAAATGTTAACGCTATAGACACTCTCAATGAAATTTATGATTA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATTGCAAATGTTAACGCTATAGACACTCTCAATGAAATTTATGATTA  886

seq1  CTCTACTATGTGGTATAAAACACACCTGTTGAAGTTATTGTTTTTTTCCT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTACTATGTGGTATAAAACACACCTGTTGAAGTTATTGTTTTTTTCCT  936

seq1  AACTATCAGAACAGAAATCTCTGCTTTCATGTCTTTTTCCTCCTCTAGAC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATCAGAACAGAAATCTCTGCTTTCATGTCTTTTTCCTCCTCTAGAC  986

seq1  CAGAGAATTC  1009
      ||||||||||
seq2  CAGAGAATTC  996