BAC Information

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BAC

Clone NameB6Ng01-049L13
Chromosome4 (Build37)
Map Location 31,413,422 - 31,645,314
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC619906, LOC100040864, LOC100040891
Downstream geneMap3k7, LOC665218, LOC665228, LOC665232, Bach2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-049L13.bB6Ng01-049L13.g
ACCDH873902DH873903
length1,0151,064
definitionDH873902|Mus musculus domesticus DNA, BAC clone: B6Ng01-049L13, 5' end.DH873903|Mus musculus domesticus DNA, BAC clone: B6Ng01-049L13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(31,413,422 - 31,414,442)(31,644,238 - 31,645,314)
sequence
gaattcaattcccagcaccccagcacatctgtggcagctcacaaccatct
ataactatagccccttgagatctgatgctctcttctagcatgcagacata
catgcagacaaacatctaaataaataaataatggaatcttcagaactttg
tagaaaagcttaaaaaattaatagaagagatgatttaagaatgtagttca
aggaaatttcccaaaagataaatgaattgaaagtaacaaaatataaatat
ataatatctcacaagatatttcttaataagatgactagatggccaagagg
agaaatgttaggtggaaaaaaatgtcatacacagaaaacacaagacacct
acaaaaatccaaacaaataaaataagaagtataacttatcttagaattct
tcctaaatacaatgaagtaagtgggtaattctccctatccagagaaggac
tatctctttcatttatactcctacacaaagaagtatccaagttcaataaa
gatacagaatttgcaaactgactcttaaaactacagatagagagaaaata
agcttctgcaaagcttatgtaataacaaaatgataaatgtaaaatccatg
taactattatgaccctggatctatttaagagtcagactcagatcaaaacc
aatgcaataaccacagtgagaagagtgtggtgaggagaactgacactggg
caggtctgtcaggaagatgggcagaagcctcttagagctgactcaaagca
tcttagatgacaaatcttatagtggtgtttacacatgttggatgtcatga
ggcgcagcactgtaaagggagactgagcaagcctggaagaattccagtct
tcatttttcaggaagaatgctatattgtatgagcccaattgcaaagcaga
tgttattcatttcaaatgaaatgcaaatgaggtaacttcacttattaaaa
tagaattcccgatcagacctagaagcagtctcacttaaatgctcctatgc
aggaacgatactgaa
gaattcaatctggggcattgggtctttcctcgagaggaggttgacaagaa
agccctttattttcatttgcagcagtatggaaccctttgctcaagcctag
cgttgtcccacgagtgtaagcacagtttgcagtcagagatctctaagctc
actttccttggggcaaagcaaaacaattgctttctgaagtcctgagatct
ttctgagacccactgaggtaagaaatgcggattctgtcatacctttttct
attctctccctgatttcgaaaactcttggagcatttaagcttttgcaacc
aaaagcagagcctagtgatatgtactgttcttgtaagcaacttttgccgt
tagtacccaaatgcagggcacaggcaggcatcttctgactggaaatagaa
aagcaaaatcagtaaaatcaaaattagaaattttgatagtaccttatcat
acatgtgctcattttcatctagtgaactagttttatgaaattgtatatag
tatgatatagatgtatgttatgttaatagaaataatgactgaaaagccac
caagtaatggtgggctttttgggctcagtagtgtgcctaaggttccacac
tccctaattgcaagggctgattttgctctgcctcctgattccttcccatg
actctgtgctcatcctctgcatgtcctgtggaaaccactgttcgtgcttt
cgaagctatgcgactactcacaaagatgaacctctgtcagctccagagcc
tcagaagagaaccggtgagcccactgctctccgtagcatcaaagcagcct
gaatgcaagctttcattagagcttgttgcagtggtagcacttgaaactga
atgaggattaaatcaacgttagagactgattacactgttgatatcaaaca
tggagctttaagtgggtctgctgctggcatggaaccagatgcctaatttc
ttatctttctccttctatttcttcccaagtgcagggcagacttagtgtgt
aagtggtttaaatgagagcctcaataaccattttcttctaagcaaagcgc
taatacatattttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_31413422_31414442
seq2: B6Ng01-049L13.b_44_1058

seq1  GAATTCAATTCCCAGCACCCCAGCACATCTGTGGCAGCTCACAACCATCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATTCCCAGCACCCCAGCACATCTGTGGCAGCTCACAACCATCT  50

seq1  ATAACTATAGCCCCTTGAGATCTGATGCTCTCTTCTAGCATGCAGACATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTATAGCCCCTTGAGATCTGATGCTCTCTTCTAGCATGCAGACATA  100

seq1  CATGCAGACAAACATCTAAATAAATAAATAATGGAATCTTCAGAACTTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCAGACAAACATCTAAATAAATAAATAATGGAATCTTCAGAACTTTG  150

seq1  TAGAAAAGCTTAAAAAATTAATAGAAGAGATGATTTAAGAATGTAGTTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAAGCTTAAAAAATTAATAGAAGAGATGATTTAAGAATGTAGTTCA  200

seq1  AGGAAATTTCCCAAAAGATAAATGAATTGAAAGTAACAAAATATAAATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAATTTCCCAAAAGATAAATGAATTGAAAGTAACAAAATATAAATAT  250

seq1  ATAATATCTCACAAGATATTTCTTAATAAGATGACTAGATGGCCAAGAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATATCTCACAAGATATTTCTTAATAAGATGACTAGATGGCCAAGAGG  300

seq1  AGAAATGTTAGGTGGAAAAAAATGTCATACACAGAAAACACAAGACACCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATGTTAGGTGGAAAAAAATGTCATACACAGAAAACACAAGACACCT  350

seq1  ACAAAAATCCAAACAAATAAAATAAGAAGTATAACTTATCTTAGAATTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAATCCAAACAAATAAAATAAGAAGTATAACTTATCTTAGAATTCT  400

seq1  TCCTAAATACAATGAAGTAAGTGGGTAATTCTCCCTATCCAGAGAAGGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAAATACAATGAAGTAAGTGGGTAATTCTCCCTATCCAGAGAAGGAC  450

seq1  TATCTCTTTCATTTATACTCCTACACAAAGAAGTATCCAAGTTCAATAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCTTTCATTTATACTCCTACACAAAGAAGTATCCAAGTTCAATAAA  500

seq1  GATACAGAATTTGCAAACTGACTCTTAAAACTACAGATAGAGAGAAAATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACAGAATTTGCAAACTGACTCTTAAAACTACAGATAGAGAGAAAATA  550

seq1  AGCTTCTGCAAAGCTTATGTAATAACAAAATGATAAATGTAAAATCCATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCTGCAAAGCTTATGTAATAACAAAATGATAAATGTAAAATCCATG  600

seq1  TAACTATTATGACCCTGGATCTATTTAAGAGTCAGACTCAGATCAAAACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTATTATGACCCTGGATCTATTTAAGAGTCAGACTCAGATCAAAACC  650

seq1  AATGCAATAACCACAGTGAGAAGAGTGTGGTGAGGAGAACTGACACTGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCAATAACCACAGTGAGAAGAGTGTGGTGAGGAGAACTGACACTGGG  700

seq1  CAGGTCTGTCAGGAAGATGGGCAGGAAGCCTCTTAGAGCTGACTCAAAGC  750
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  CAGGTCTGTCAGGAAGATGGGCA-GAAGCCTCTTAGAGCTGACTCAAAGC  749

seq1  ATCTTAGATGACAAATCTTATAGTGGTGTTTACACATGTTGGATGTCATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTAGATGACAAATCTTATAGTGGTGTTTACACATGTTGGATGTCATG  799

seq1  AGGCGCAGCACTGTAAAAGGGAGAACTGAGCAAGCCTGGAAGAATTCCAG  850
      |||||||||||||| |||||||| ||||||||||||||||||||||||||
seq2  AGGCGCAGCACTGT-AAAGGGAG-ACTGAGCAAGCCTGGAAGAATTCCAG  847

seq1  TCTTCATTTTTCAGGAAGAATGCTATAATGTATGAGCCCAAATGCAAAAG  900
      ||||||||||||||||||||||||||| ||||||||||||| ||| ||||
seq2  TCTTCATTTTTCAGGAAGAATGCTATATTGTATGAGCCCAATTGC-AAAG  896

seq1  CAGATGATATTCATTTCAAATGAAAATGCAAATGAGGTAAACTCACTTAT  950
      |||||| ||||||||||||||| |||||||||||||||||  ||||||||
seq2  CAGATGTTATTCATTTCAAATG-AAATGCAAATGAGGTAACTTCACTTAT  945

seq1  TAAAATAGACTCCCAGATCAGA-CTAGAAAAGCAAGTCTCACTTAAATGC  999
      ||||||||| | || ||||||| ||||  |||| ||||||||||||||||
seq2  TAAAATAGAATTCCCGATCAGACCTAG--AAGC-AGTCTCACTTAAATGC  992

seq1  T-CTATGCAGGAACGATACTGAA  1021
      | |||||||||||||||||||||
seq2  TCCTATGCAGGAACGATACTGAA  1015

seq1: chr4_31644238_31645314
seq2: B6Ng01-049L13.g_68_1131 (reverse)

seq1  AAAAATATGTA-TAGCGCTTTTGTCTAGAAAGAAAATGTGTAATTGAGGC  49
      ||||||||||| |||||| ||||  ||| ||||||||| || ||||||||
seq2  AAAAATATGTATTAGCGC-TTTGCTTAG-AAGAAAATG-GTTATTGAGGC  47

seq1  TTCTCATTTTAAAACCAACTTACAACACTAAGTCTGCCCTGCACTTGGGA  99
       ||||||||  ||||| |||||| ||||||||||||||||||||||||||
seq2  -TCTCATTT--AAACC-ACTTAC-ACACTAAGTCTGCCCTGCACTTGGGA  92

seq1  AGGAAATAGAAGGAGAAAGATTAAAGAAAAATAAGGCATCTGGTTCCATG  149
      | |||||||||||||||||||  |||  |||| |||||||||||||||||
seq2  A-GAAATAGAAGGAGAAAGAT--AAG--AAATTAGGCATCTGGTTCCATG  137

seq1  CCAGCAGCAGACCCACTTAAAGCT-CATGTTTGAATATCAACAGTGTAAT  198
      |||||||||||||||||||||||| |||||||| ||||||||||||||||
seq2  CCAGCAGCAGACCCACTTAAAGCTCCATGTTTG-ATATCAACAGTGTAAT  186

seq1  CAGTCTCTAACGTTGATTTTATCCTCAATTCAGTTTCAAGTGCTACACCT  248
      ||||||||||||||||||| |||||| |||||||||||||||||||  ||
seq2  CAGTCTCTAACGTTGATTTAATCCTC-ATTCAGTTTCAAGTGCTACCACT  235

seq1  GCAACAAGCTCTAATGAAAGCTTGCATTCAGGCTGCTTTGATGCTACGGA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACAAGCTCTAATGAAAGCTTGCATTCAGGCTGCTTTGATGCTACGGA  285

seq1  GAGCAGTGGGCTCACCGGTTCTCTTCTGAGGCTCTGGAGCTGACAGAGGT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGTGGGCTCACCGGTTCTCTTCTGAGGCTCTGGAGCTGACAGAGGT  335

seq1  TCATCTTTGTGAGTAGTCGCATAGCTTCGAAAGCACGAACAGTGGTTTCC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTTTGTGAGTAGTCGCATAGCTTCGAAAGCACGAACAGTGGTTTCC  385

seq1  ACAGGACATGCAGAGGATGAGCACAGAGTCATGGGAAGGAATCAGGAGGC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGACATGCAGAGGATGAGCACAGAGTCATGGGAAGGAATCAGGAGGC  435

seq1  AGAGCAAAATCAGCCCTTGCAATTAGGGAGTGTGGAACCTTAGGCACACT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAAAATCAGCCCTTGCAATTAGGGAGTGTGGAACCTTAGGCACACT  485

seq1  ACTGAGCCCAAAAAGCCCACCATTACTTGGTGGCTTTTCAGTCATTATTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGCCCAAAAAGCCCACCATTACTTGGTGGCTTTTCAGTCATTATTT  535

seq1  CTATTAACATAACATACATCTATATCATACTATATACAATTTCATAAAAC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTAACATAACATACATCTATATCATACTATATACAATTTCATAAAAC  585

seq1  TAGTTCACTAGATGAAAATGAGCACATGTATGATAAGGTACTATCAAAAT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTCACTAGATGAAAATGAGCACATGTATGATAAGGTACTATCAAAAT  635

seq1  TTCTAATTTTGATTTTACTGATTTTGCTTTTCTATTTCCAGTCAGAAGAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAATTTTGATTTTACTGATTTTGCTTTTCTATTTCCAGTCAGAAGAT  685

seq1  GCCTGCCTGTGCCCTGCATTTGGGTACTAACGGCAAAAGTTGCTTACAAG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGCCTGTGCCCTGCATTTGGGTACTAACGGCAAAAGTTGCTTACAAG  735

seq1  AACAGTACATATCACTAGGCTCTGCTTTTGGTTGCAAAAGCTTAAATGCT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTACATATCACTAGGCTCTGCTTTTGGTTGCAAAAGCTTAAATGCT  785

seq1  CCAAGAGTTTTCGAAATCAGGGAGAGAATAGAAAAAGGTATGACAGAATC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGAGTTTTCGAAATCAGGGAGAGAATAGAAAAAGGTATGACAGAATC  835

seq1  CGCATTTCTTACCTCAGTGGGTCTCAGAAAGATCTCAGGACTTCAGAAAG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCATTTCTTACCTCAGTGGGTCTCAGAAAGATCTCAGGACTTCAGAAAG  885

seq1  CAATTGTTTTGCTTTGCCCCAAGGAAAGTGAGCTTAGAGATCTCTGACTG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTGTTTTGCTTTGCCCCAAGGAAAGTGAGCTTAGAGATCTCTGACTG  935

seq1  CAAACTGTGCTTACACTCGTGGGACAACGCTAGGCTTGAGCAAAGGGTTC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTGTGCTTACACTCGTGGGACAACGCTAGGCTTGAGCAAAGGGTTC  985

seq1  CATACTGCTGCAAATGAAAATAAAGGGCTTTCTTGTCAACCTCCTCTCGA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACTGCTGCAAATGAAAATAAAGGGCTTTCTTGTCAACCTCCTCTCGA  1035

seq1  GGAAAGACCCAATGCCCCAGATTGAATTC  1077
      |||||||||||||||||||||||||||||
seq2  GGAAAGACCCAATGCCCCAGATTGAATTC  1064