BAC Information

Click to search

BAC

Clone NameB6Ng01-050B10
Chromosome4 (Build37)
Map Location 7,186,793 - 7,317,256
singlet/doubletdoublet
Overlap genenone
Upstream geneCyp7a1, Sdcbp, Nsmaf, LOC100039397, LOC100039414, Tox, LOC100039421, LOC666700
Downstream geneCar8, LOC100039494
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-050B10.bB6Ng01-050B10.g
ACCDH874144DH874145
length252893
definitionDH874144|Mus musculus domesticus DNA, BAC clone: B6Ng01-050B10, 5' end.DH874145|Mus musculus domesticus DNA, BAC clone: B6Ng01-050B10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,186,793 - 7,187,044)(7,316,736 - 7,317,256)
sequence
ttgtctattaaacagaggccctgaagaagtgagctttctagatacactgt
tgactgacatgggtggtatgaaaagagctaatgatttgctttagaaatca
tttaatcataaactatgatgaaaagtaatcagtatgtttaaatcacttag
aagtggaattctgttcctagctggacctaagaagctttccaaatatatat
tacagtgtgtgtgtatgtatgtgtgtgcatgtgtgtgaatgtgtgtgtgt
gt

gaattccactatgtaatagaaactgttttcaaaatttgtatatatatgaa
atgtaattggataaaattcctttgccaacatcctctcttaccttctttca
ccttccaataaccctgtttccccagaccccctcctaatttcacatctttt
tttttttcttgtgaattcttgcacttagcattatctgtgtggatgctggt
ggggaattatttgtttgagtaggggcaaagcattatcactgaggagtatg
gctcaccttctccttgcaacgtctatctgtttatagtttctttgagagag
ttggagcttatgagttctccatccattgtgaaatggtggaggatccagtg
tttttcacaccttgcataggtagcatcacttgcaatgatgctgtgagttc
gtgggaggcatgttaagaccagaagaaaaatttttatagcacttcttcct
atcttccagcctttatcttctttgtttcccctctttggtgatgttctttg
aaccttagaagggtaatgtagatatccaggttatgactgagcactctata
atacactggccaggtatgaggctcaaccttgcttgttttccactgcaaac
agaagcttccctggacacagagaatatacatataaatataaatatttagt
gggtggtttggcaccatatccgtttagcaagtgatagtagtaggtttctc
tctcgggcatatatcctccacatctaccctggctttggtcaggtgtttag
taccaggtatgaattacctatggcatggcatcagaagtagcttgtcactc
ctgacaataatgttactattgcacattcttgcctggcagcttgtactagc
tcatagggttcacacttgtgagattgttgatatttatacccca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_7186793_7187044
seq2: B6Ng01-050B10.b_48_299

seq1  TTGTCTATTAAACAGAGGCCCTGAAGAAGTGAGCTTTCTAGATACACTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTATTAAACAGAGGCCCTGAAGAAGTGAGCTTTCTAGATACACTGT  50

seq1  TGACTGACATGGGTGGTATGAAAAGAGCTAATGATTTGCTTTAGAAATCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGACATGGGTGGTATGAAAAGAGCTAATGATTTGCTTTAGAAATCA  100

seq1  TTTAATCATAAACTATGATGAAAAGTAATCAGTATGTTTAAATCACTTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATCATAAACTATGATGAAAAGTAATCAGTATGTTTAAATCACTTAG  150

seq1  AAGTGGAATTCTGTTCCTAGCTGGACCTAAGAAGCTTTCCAAATATATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGAATTCTGTTCCTAGCTGGACCTAAGAAGCTTTCCAAATATATAT  200

seq1  TACAGTGTGTGTGTATGTATGTGTGTGCATGTGTGTGAATGTGTGTGTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTGTGTGTGTATGTATGTGTGTGCATGTGTGTGAATGTGTGTGTGT  250

seq1  GT  252
      ||
seq2  GT  252


seq1: chr4_7316736_7317256
seq2: B6Ng01-050B10.g_66_586 (reverse)

seq1  CTACATTACCCTTCTAAGGTTCAAAGAACATCACCAAAGAGGGGAAACAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATTACCCTTCTAAGGTTCAAAGAACATCACCAAAGAGGGGAAACAA  50

seq1  AGAAGATAAAGGCTGGAAGATAGGAAGAAGTGCTATAAAAATTTTTCTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGATAAAGGCTGGAAGATAGGAAGAAGTGCTATAAAAATTTTTCTTC  100

seq1  TGGTCTTAACATGCCTCCCACGAACTCACAGCATCATTGCAAGTGATGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTTAACATGCCTCCCACGAACTCACAGCATCATTGCAAGTGATGCT  150

seq1  ACCTATGCAAGGTGTGAAAAACACTGGATCCTCCACCATTTCACAATGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTATGCAAGGTGTGAAAAACACTGGATCCTCCACCATTTCACAATGGA  200

seq1  TGGAGAACTCATAAGCTCCAACTCTCTCAAAGAAACTATAAACAGATAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAACTCATAAGCTCCAACTCTCTCAAAGAAACTATAAACAGATAGA  250

seq1  CGTTGCAAGGAGAAGGTGAGCCATACTCCTCAGTGATAATGCTTTGCCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTGCAAGGAGAAGGTGAGCCATACTCCTCAGTGATAATGCTTTGCCCC  300

seq1  TACTCAAACAAATAATTCCCCACCAGCATCCACACAGATAATGCTAAGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCAAACAAATAATTCCCCACCAGCATCCACACAGATAATGCTAAGTG  350

seq1  CAAGAATTCACAAGAAAAAAAAAAAGATGTGAAATTAGGAGGGGGTCTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAATTCACAAGAAAAAAAAAAAGATGTGAAATTAGGAGGGGGTCTGG  400

seq1  GGAAACAGGGTTATTGGAAGGTGAAAGAAGGTAAGAGAGGATGTTGGCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACAGGGTTATTGGAAGGTGAAAGAAGGTAAGAGAGGATGTTGGCAA  450

seq1  AGGAATTTTATCCAATTACATTTCATATATATACAAATTTTGAAAACAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATTTTATCCAATTACATTTCATATATATACAAATTTTGAAAACAGT  500

seq1  TTCTATTACATAGTGGAATTC  521
      |||||||||||||||||||||
seq2  TTCTATTACATAGTGGAATTC  521


| Home | SequenceCutter | Blast | Download |