BAC Information

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BAC

Clone NameB6Ng01-050E11
Chromosome4 (Build37)1 (Build37)
Map Location 122,375,762 - 122,376,499174,665,181 - 174,665,691
singlet/doubletsingletsinglet
Overlap gene9530002B09Rik
Upstream geneLOC666931, LOC666937, LOC633269, LOC633279
Downstream genePpt1, Cap1, Mfsd2, Mycl1, Trit1, Bmp8b, Oxct2b, Ppie, Hpcal4, Nt5c1a, Heyl, LOC194197, LOC622334, Pabpc4, Bmp8a, Oxct2a, Macf1, D830031N03Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-050E11.bB6Ng01-050E11.g
ACCDH874274DH874275
length849716
definitionDH874274|Mus musculus domesticus DNA, BAC clone: B6Ng01-050E11, 5' end.DH874275|Mus musculus domesticus DNA, BAC clone: B6Ng01-050E11, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(122,375,762 - 122,376,499)(174,665,181 - 174,665,691)
sequence
gaattccagggcatcaaacagcttcctctgcctcataggagtgctgcatg
cacaagtttcacagatatacatgcaggcaaaacatgttcacaggcaaaat
aagtaacaaataaacctcaaaacatcaacataaatgaaaaagatcataaa
aaatgaaaagaaaaagaatgaaaagacatgttaccaagaagataggaaag
ggccagcagcatcatttgtctttagcaaaatacaaagtgaaatatctaag
ttctgattgatacccagacagacctcaaggatacggaaaaagagaaatag
ttgggtcctattggtggaaatgtaacaatacaacccctgaattacttagc
aaattgaaaacaaaccaaaagcaaacctgggccaggtacagtgacacaaa
actgaaatgtgttgatttggaactgaagtaggaggattgtcagaaacaaa
atgaatgacatgaagtgtctgaggcacacagaagtgtcaggaaccaacaa
agagaggcagaagactagcagttgattgttatgggatggttctgccatga
actgtacagttgacagattggcttcaacatgcaatgcccaggagaatttt
attttaggaaagataactgctattaatatgctttctctaatattatatat
atcaagcactaggtattagtccacccttttgaggagatttctgcagaact
acaaagatacactgtcttgtagtgatgctatatagacagtaaatgttttc
ttaatattaataataagcttgtagactgctaaatatattagtaattgtta
agctcttttatataggactgctataagtcatctctgatatcaaactgca
gaattcctgatctttctgagacttttatcatgaatgggtgttgggtcttg
tcaaatgctttttccacatctaacaagatgatcatgtggtttttttcttt
gagtttgtttatatactggattatgttgatgcttttcagtatattgaaaa
atccctgcttccctgggatgaaacctacttggtcaggaaggatgattgtt
ttgatctgttcttggatttggttagctagaactttattgagaattttttc
atcgatattcataaaggaaattggtctgaaattctttatctttgttgggt
ctttttgtggtttaggtatcagagtaattgtggcttcatagaatgagttg
ggtagaataccttctacttctattttgtggaatagtttgtgcagaacctg
gattagatcttctttgaaggtctgatagaactctgcactaaacccatatg
gtcctgggctttttttggttaggaaactattattaactgcttctatttct
ttaggggatataggatagcttagattattaacctgatcttgatttaactt
tggtacctggtatctgtctagaaatttatccatttcatccaggttctctg
attttgtttgagtatagccttttatagaaggaactgatggtattttggat
tttcttcagtatctgttgttatgtctcccttttcattttctgattttgtt
aattagaattgctttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_122375762_122376499
seq2: B6Ng01-050E11.b_46_783 (reverse)

seq1  TGTCTATATAGCATCACTACAAGACAGTGTATCTTTGTAGTTCTGCAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTATATAGCATCACTACAAGACAGTGTATCTTTGTAGTTCTGCAGAA  50

seq1  ATCTCCTCAAAAGGGTGGACTAATACCTAGTGCTTGATATATATAATATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCCTCAAAAGGGTGGACTAATACCTAGTGCTTGATATATATAATATT  100

seq1  AGAGAAAGCATATTAATAGCAGTTATCTTTCCTAAAATAAAATTCTCCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAAGCATATTAATAGCAGTTATCTTTCCTAAAATAAAATTCTCCTG  150

seq1  GGCATTGCATGTTGAAGCCAATCTGTCAACTGTACAGTTCATGGCAGAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATTGCATGTTGAAGCCAATCTGTCAACTGTACAGTTCATGGCAGAAC  200

seq1  CATCCCATAACAATCAACTGCTAGTCTTCTGCCTCTCTTTGTTGGTTCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCCATAACAATCAACTGCTAGTCTTCTGCCTCTCTTTGTTGGTTCCT  250

seq1  GACACTTCTGTGTGCCTCAGACACTTCATGTCATTCATTTTGTTTCTGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTTCTGTGTGCCTCAGACACTTCATGTCATTCATTTTGTTTCTGAC  300

seq1  AATCCTCCTACTTCAGTTCCAAATCAACACATTTCAGTTTTGTGTCACTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTCCTACTTCAGTTCCAAATCAACACATTTCAGTTTTGTGTCACTG  350

seq1  TACCTGGCCCAGGTTTGCTTTTGGTTTGTTTTCAATTTGCTAAGTAATTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTGGCCCAGGTTTGCTTTTGGTTTGTTTTCAATTTGCTAAGTAATTC  400

seq1  AGGGGTTGTATTGTTACATTTCCACCAATAGGACCCAACTATTTCTCTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGTTGTATTGTTACATTTCCACCAATAGGACCCAACTATTTCTCTTT  450

seq1  TTCCGTATCCTTGAGGTCTGTCTGGGTATCAATCAGAACTTAGATATTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCGTATCCTTGAGGTCTGTCTGGGTATCAATCAGAACTTAGATATTTC  500

seq1  ACTTTGTATTTTGCTAAAGACAAATGATGCTGCTGGCCCTTTCCTATCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGTATTTTGCTAAAGACAAATGATGCTGCTGGCCCTTTCCTATCTT  550

seq1  CTTGGTAACATGTCTTTTCATTCTTTTTCTTTTCATTTTTTATGATCTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTAACATGTCTTTTCATTCTTTTTCTTTTCATTTTTTATGATCTTT  600

seq1  TTCATTTATGTTGATGTTTTGAGGTTTATTTGTTACTTATTTTGCCTGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTTATGTTGATGTTTTGAGGTTTATTTGTTACTTATTTTGCCTGTG  650

seq1  AACATGTTTTGCCTGCATGTATATCTGTGAAACTTGTGCATGCAGCACTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGTTTTGCCTGCATGTATATCTGTGAAACTTGTGCATGCAGCACTC  700

seq1  CTATGAGGCAGAGGAAGCTGTTTGATGCCCTGGAATTC  738
      ||||||||||||||||||||||||||||||||||||||
seq2  CTATGAGGCAGAGGAAGCTGTTTGATGCCCTGGAATTC  738

seq1: chr1_174665181_174665691
seq2: B6Ng01-050E11.g_66_576 (reverse)

seq1  ATATCACCTAAAGAAATAGAAGCAGTTATTAATAGTCTCCCAACCAAAAA  50
      ||||| |||||||||||||||||||||| ||||||| ||| |||||||||
seq2  ATATCCCCTAAAGAAATAGAAGCAGTTAATAATAGTTTCCTAACCAAAAA  50

seq1  AAGCCCAGGACCAGATGGGTTTAGTGCAGAGTTCTACCAGACCTTCAAAG  100
      ||||||||||||| |||||||||||||||||||||| |||||||||||||
seq2  AAGCCCAGGACCATATGGGTTTAGTGCAGAGTTCTATCAGACCTTCAAAG  100

seq1  AAGATCTAATTCCAATTCTGCACAAACTATTTCACAAAATAGAAGTAGAA  150
      |||||||||| |   |||||||||||||||| ||||||||||||||||||
seq2  AAGATCTAATCCAGGTTCTGCACAAACTATTCCACAAAATAGAAGTAGAA  150

seq1  GGTACTCTACCCAACTCATTTTATGAAGCCACTATTACTCTGATACCTAA  200
      |||| ||||||||||||||| ||||||||||| |||||||||||||||||
seq2  GGTATTCTACCCAACTCATTCTATGAAGCCACAATTACTCTGATACCTAA  200

seq1  ACCACAGAAAGACCCAACAAAGATAGAGAACTTCAGACCAATTTCTCTTA  250
      |||||| |||||||||||||||||| |||| ||||||||||||||  |||
seq2  ACCACAAAAAGACCCAACAAAGATAAAGAATTTCAGACCAATTTCCTTTA  250

seq1  TGAATATCGATGCAAAAATCCTCAATAAAATTCTCGCTAACCGAATCCAA  300
      |||||||||||| |||||| ||||||||| |||| ||||||| |||||||
seq2  TGAATATCGATGAAAAAATTCTCAATAAAGTTCTAGCTAACCAAATCCAA  300

seq1  GAACACATTAAAGCAATCATCCATCCTGACCAAGTAGGTTTTATTCCAGG  350
      ||||| || ||| ||||||||| |||||||||||||||||| || |||||
seq2  GAACAGATCAAAACAATCATCCTTCCTGACCAAGTAGGTTTCATCCCAGG  350

seq1  GATGCAGGGATGGTTTAATATACGAAAATCCATCAACGTAATCCATTATA  400
      || ||||||||  || |||||||  |||  ||||||| ||||||| ||||
seq2  GAAGCAGGGATTTTTCAATATACTGAAAAGCATCAACATAATCCAGTATA  400

seq1  TAAACAAACTCAAAGACAAAAACCACATGATCATCTCGTTAGATGCAGAA  450
      |||||||||||||||| ||||||||||||||||||| ||||||||  |||
seq2  TAAACAAACTCAAAGAAAAAAACCACATGATCATCTTGTTAGATGTGGAA  450

seq1  AAAGCATTTGACAAGATCCAACACCCATTCATGATAAAAGTTTTGGAAAG  500
      |||||||||||||||| |||||||||||||||||||||||| |  |||||
seq2  AAAGCATTTGACAAGACCCAACACCCATTCATGATAAAAGTCTCAGAAAG  500

seq1  ATCAGGAATTC  511
      |||||||||||
seq2  ATCAGGAATTC  511